BAC Information

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BAC

Clone NameB6Ng01-152B05
Chromosome7 (Build37)
Map Location 51,074,098 - 51,216,273
singlet/doubletdoublet
Overlap geneKlk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8
Upstream geneLOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7
Downstream geneKlk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473, Vrk3, EG628904, Atf5, Nup62, Il4i1, Tbc1d17, Akt1s1, Pnkp, Ptov1, Med25, Fuz, Ap2a1, Stk22s1, Cpt1c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152B05.bB6Ng01-152B05.g
ACCDH947739DH947740
length336769
definitionDH947739|Mus musculus domesticus DNA, BAC clone: B6Ng01-152B05, 5' end.DH947740|Mus musculus domesticus DNA, BAC clone: B6Ng01-152B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,215,938 - 51,216,273)(51,074,098 - 51,074,863)
sequence
ttctcccatttaaatcctccaaccacctgagactggacaagaggtgcagc
ctctgcaacaggggcaatgggggaggggagacttggctcatttagggagg
tgcacttttgggggacagagttaagcagggatgggatcaggggatatggg
cacgggttctgaagaagtgatccaatatggctggtcttggatagggagat
gaatgctgtgggtacagaaataactctagaatcaggaatcaggtatagtg
tcaggccaccttatagttttttttactatgggatagaagggcaatgagag
agaaagagaggggggagatggagaggtagagagaga
gaattcaagtctggtactgcaaacctggtcagtagcccagggcttgggag
gtcataggcccgagggagggggtagagctactggggggaacctactgctg
tttagtttaaatcattatgttgccaaacttccctctaaatatttgtaccc
ccagtatagtgctgctctcagcactgactagagaaacccctttatgcagt
gggcagaaatacagagacctgcgcaaagtgggtaaggtgagtgactatga
gtgactattgaatgctcagccctaaggggacagctacatcaataatgcca
aggctcagagaacatggaggaagagtgtatatacagaatataagagggca
gtatagactgccatgaaatgtcgtgctctggacatgatggttgctcttca
ctcctgaactcacagaaggtatggttgcctgcctgaaaggaaaggaaagc
tagaggggcaggctgggatcaagacgagattcatcaatatttcaacagaa
cttactggattgaatactctacaaaaataaaaagaagggaaaaaagaatg
gagaggacatgaaagtggaggtgtctggaggagtagggggtcgagaaagg
ggtggctatagccaagatgcattgcatacgggtataaaattatcaaagaa
caacacaagatactcttttttaaaaagcaggtatgacatgaattattgtt
agctttgtagatattaaatgcccagtgctcatgaacaaggaggaaaatag
gaagaaaggaatggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_51215938_51216273
seq2: B6Ng01-152B05.b_51_386 (reverse)

seq1  TCTCTCTCTACCTCTCCATCTCCCCCCTCTCTTTCTCTCTCATTGCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTACCTCTCCATCTCCCCCCTCTCTTTCTCTCTCATTGCCCTT  50

seq1  CTATCCCATAGTAAAAAAAACTATAAGGTGGCCTGACACTATACCTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCCATAGTAAAAAAAACTATAAGGTGGCCTGACACTATACCTGATT  100

seq1  CCTGATTCTAGAGTTATTTCTGTACCCACAGCATTCATCTCCCTATCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTCTAGAGTTATTTCTGTACCCACAGCATTCATCTCCCTATCCAA  150

seq1  GACCAGCCATATTGGATCACTTCTTCAGAACCCGTGCCCATATCCCCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCCATATTGGATCACTTCTTCAGAACCCGTGCCCATATCCCCTGA  200

seq1  TCCCATCCCTGCTTAACTCTGTCCCCCAAAAGTGCACCTCCCTAAATGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCCCTGCTTAACTCTGTCCCCCAAAAGTGCACCTCCCTAAATGAG  250

seq1  CCAAGTCTCCCCTCCCCCATTGCCCCTGTTGCAGAGGCTGCACCTCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCTCCCCTCCCCCATTGCCCCTGTTGCAGAGGCTGCACCTCTTGT  300

seq1  CCAGTCTCAGGTGGTTGGAGGATTTAAATGGGAGAA  336
      ||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTCAGGTGGTTGGAGGATTTAAATGGGAGAA  336

seq1: chr7_51074098_51074863
seq2: B6Ng01-152B05.g_73_841

seq1  GAATTCAAGTCTGGTACTGCAAACCTGGTCAGTAGCCCAGGGCTTGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCTGGTACTGCAAACCTGGTCAGTAGCCCAGGGCTTGGGAG  50

seq1  GTCATAGGCCCGAGGGAGGGGGTAGAGCTACTGGGGGGAACCTACTGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAGGCCCGAGGGAGGGGGTAGAGCTACTGGGGGGAACCTACTGCTG  100

seq1  TTTAGTTTAAATCATTATGTTGCCAAACTTCCCTCTAAATATTTGTACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTAAATCATTATGTTGCCAAACTTCCCTCTAAATATTTGTACCC  150

seq1  CCAGTATAGTGCTGCTCTCAGCACTGACTAGAGAAACCCCTTTATGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATAGTGCTGCTCTCAGCACTGACTAGAGAAACCCCTTTATGCAGT  200

seq1  GGGCAGAAATACAGAGACCTGCGCAAAGTGGGTAAGGTGAGTGACTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAAATACAGAGACCTGCGCAAAGTGGGTAAGGTGAGTGACTATGA  250

seq1  GTGACTATTGAATGCTCAGCCCTAAGGGGACAGCTACATCAATAATGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTATTGAATGCTCAGCCCTAAGGGGACAGCTACATCAATAATGCCA  300

seq1  AGGCTCAGAGAACATGGAGGAAGAGTGTATATACAGAATATAAGAGGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAGAGAACATGGAGGAAGAGTGTATATACAGAATATAAGAGGGCA  350

seq1  GTATAGACTGCCATGAAATGTCGTGCTCTGGACATGATGGTTGCTCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGACTGCCATGAAATGTCGTGCTCTGGACATGATGGTTGCTCTTCA  400

seq1  CTCCTGAACTCACAGAAGGTATGGTTGCCTGCCTGAAAGGAAAGGAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAACTCACAGAAGGTATGGTTGCCTGCCTGAAAGGAAAGGAAAGC  450

seq1  TAGAGGGGCAGGCTGGGATCAAGACGAGATTCATCAATATTTCAACAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGGCAGGCTGGGATCAAGACGAGATTCATCAATATTTCAACAGAA  500

seq1  CTTACTGGATTGAATACTCTACAAAAATAAAAAGAAGGGAAAAAAGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGGATTGAATACTCTACAAAAATAAAAAGAAGGGAAAAAAGAATG  550

seq1  GAGAGGACATGAAAGTGGAGGTGTCTGGAGGAGTAGGGGGTCGAGAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGACATGAAAGTGGAGGTGTCTGGAGGAGTAGGGGGTCGAGAAAGG  600

seq1  GGTGGCTATAGCCAAGATGCATTGCATACGGGTATAAAATTATCAAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTATAGCCAAGATGCATTGCATACGGGTATAAAATTATCAAAGAA  650

seq1  CAACACAAGATACTC-TTTTTAAAAAGCAGGTATGACATGAATTA-TGTT  698
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  CAACACAAGATACTCTTTTTTAAAAAGCAGGTATGACATGAATTATTGTT  700

seq1  AGCTTTGTAGATATTAAATGCCCAGTGCTCATGAACAAGGAGG-AAAGAG  747
      ||||||||||||||||||||||||||||||||||||||||||| ||| ||
seq2  AGCTTTGTAGATATTAAATGCCCAGTGCTCATGAACAAGGAGGAAAATAG  750

seq1  GAAGAAAGGAATGGAGGGA  766
      |||||||||||||||||||
seq2  GAAGAAAGGAATGGAGGGA  769