BAC Information

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BAC

Clone NameB6Ng01-154H24
Chromosome7 (Build37)
Map Location 116,113,409 - 116,114,486
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265
Downstream geneTub, Ric3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154H24.bB6Ng01-154H24.g
ACCDH949527DH949528
length1,0911,073
definitionDH949527|Mus musculus domesticus DNA, BAC clone: B6Ng01-154H24, 5' end.DH949528|Mus musculus domesticus DNA, BAC clone: B6Ng01-154H24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatattggttccctgaactgtaaagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagtcgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtattcggctattgatctggcaaatgccttcttctcagtacctgtt
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaagatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcattatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaaattcaaggaccatctacctcagtgaa
attcttaggagtccagtggtgtggggcatgcagagatattccttctaggt
gaaagataaagttattgcacctggcccctcctacaaccaagaaagaagga
caacgtttagtgggtctatttggatttctggagacaacacatccctcact
tggggtgtgttacttaggcctatttacaaagttgactcggaaagctgcta
gcctttgtgtggggcctggaccaggagaggccttcaacaggtccaggctg
ctgtgcaggctgctctaccactgggacatatgacctcagcagacccgatg
gtacttgaggtgtctgtggcctgatagagatgccgtttgagcctctggca
ggcccctgtaggtggaatacacgaaaaaacctttggatttt
gaattcttctaagagctgaacagcattgctgaaagatcagtgtcaatatg
ttgccaaggtgctaagacttgcctcgttatggggcctgggtcatttgtcc
attcaatgtcaggatacctgtcttggtgaggggagatgagcaacagtctg
aggtgacatgtagagaagcctctatgtcttgccttcatattccatgatct
gcctcgagtacccgctgtactacagagtgggctcatcacccctcttggcg
gtagaaggtcatcttgtcccttacatgtagaagcagagcatcatgttctg
cctgcccactctgccacatactgagcgagtttttgagcctcagcctgtct
gtgaaatattactagtgtccactgtagaggggtgtgcttcccactaaaga
aagaaatgcagagtactgcgacagctcaaacacacaaggtctatgggacc
ctagaggacagaaccagaaccaaagctctttcctgggcttgaagacctgg
cagtgtacagacctagatactgagttatgcaagtgtgaggttttagagcc
actgtccatcacctcaaggtcaggggaccctgtgcctgggaggtgtgcaa
tttacctagcctctgggaggtgtgatagcctctgggaggtgtgatcctgg
ggtctgcagtttacctagcctctgggaggtgtgatagcctctgggaggtg
tgatcctagagtctgcagtttgcctagcctctgggaggtgtgatcctgag
gtctgcagtttacctagcctctgggaggtgtgatcctgaggtctgcagtt
tacctagcctctgggaggtgtgatcctgaggtctgcagtttaccaagccc
aagattacttttgaccatccttccctaatcctctccagggtgtcatgggc
agaagtcttcagtagcagctgaacctccagagcagcctcaagtgagaagc
atgggtgccctccaggggaactggcttcaagtgctagtcaccctttctgt
gtgactgcttcttctggcttaaccctgtggactggtgagggatcaaggga
aataagagaaagtactggtctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_116113409_116114486
seq2: B6Ng01-154H24.g_66_1138

seq1  GAATTCTTCTAAGAGCTGAACAGCATTGCTGAAAGATCAGTGTCAATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTAAGAGCTGAACAGCATTGCTGAAAGATCAGTGTCAATATG  50

seq1  TTGCCAAGGTGCTAAGACTTGCCTCGTTATGGGGCCTGGGTCATTTGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAAGGTGCTAAGACTTGCCTCGTTATGGGGCCTGGGTCATTTGTCC  100

seq1  ATTCAATGTCAGGATACCTGTCTTGGTGAGGGGAGATGAGCAACAGTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATGTCAGGATACCTGTCTTGGTGAGGGGAGATGAGCAACAGTCTG  150

seq1  AGGTGACATGTAGAGAAGCCTCTATGTCTTGCCTTCATATTCCATGATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACATGTAGAGAAGCCTCTATGTCTTGCCTTCATATTCCATGATCT  200

seq1  GCCTCGAGTACCCGCTGTACTACAGAGTGGGCTCATCACCCCTCTTGGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGAGTACCCGCTGTACTACAGAGTGGGCTCATCACCCCTCTTGGCG  250

seq1  GTAGAAGGTCATCTTGTCCCTTACATGTAGAAGCAGAGCATCATGTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAGGTCATCTTGTCCCTTACATGTAGAAGCAGAGCATCATGTTCTG  300

seq1  CCTGCCCACTCTGCCACATACTGAGCGAGTTTTTGAGCCTCAGCCTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCACTCTGCCACATACTGAGCGAGTTTTTGAGCCTCAGCCTGTCT  350

seq1  GTGAAATATTACTAGTGTCCACTGTAGAGGGGTGTGCTTCCCACTAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATATTACTAGTGTCCACTGTAGAGGGGTGTGCTTCCCACTAAAGA  400

seq1  AAGAAATGCAGAGTACTGCGACAGCTCAAACACACAAGGTCTATGGGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGCAGAGTACTGCGACAGCTCAAACACACAAGGTCTATGGGACC  450

seq1  CTAGAGGACAGAACCAGAACCAAAGCTCTTTCCTGGGCTTGAAGACCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGGACAGAACCAGAACCAAAGCTCTTTCCTGGGCTTGAAGACCTGG  500

seq1  CAGTGTACAGACCTAGATACTGAGTTATGCAAGTGTGAGGTTTTAGAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTACAGACCTAGATACTGAGTTATGCAAGTGTGAGGTTTTAGAGCC  550

seq1  ACTGTCCATCACCTCAAGGTCAGGGGACCCTGTGCCTGGGAGGTGTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCATCACCTCAAGGTCAGGGGACCCTGTGCCTGGGAGGTGTGCAA  600

seq1  TTTACCTAGCCTCTGGGAGGTGTGATAGCCTCTGGGAGGTGTGATCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTAGCCTCTGGGAGGTGTGATAGCCTCTGGGAGGTGTGATCCTGG  650

seq1  GGTCTGCAGTTTACCTAGCCTCTGGGAGGTGTGATAGCCTCTGGGAGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCAGTTTACCTAGCCTCTGGGAGGTGTGATAGCCTCTGGGAGGTG  700

seq1  TGATCCTAGAGTCTGCAGTTTGCCTAGCCTCTGGGAGGTGTGATCCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTAGAGTCTGCAGTTTGCCTAGCCTCTGGGAGGTGTGATCCTGAG  750

seq1  GTCTGCAGTTTACCTAGCCTCTGGGAGGTGTGATCCTGAGGTCTGCAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCAGTTTACCTAGCCTCTGGGAGGTGTGATCCTGAGGTCTGCAGTT  800

seq1  TACCTAGCCTCTGGGAGGTGTGATCCTGAGGTCTGCAGTTTACCAAGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TACCTAGCCTCTGGGAGGTGTGATCCTGAGGTCTGCAGTTTACCAAG-CC  849

seq1  CAAGATTACTTTTGACCATCCTTCCCTAATCCTCTCCAGGGTGTCATGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTACTTTTGACCATCCTTCCCTAATCCTCTCCAGGGTGTCATGGG  899

seq1  CAGAAG-CCTCAGTAGCAGCTGAACCTCCAGAGCAGCCTCAAGGTGAGAA  949
      |||||| | ||||||||||||||||||||||||||||||||| |||||||
seq2  CAGAAGTCTTCAGTAGCAGCTGAACCTCCAGAGCAGCCTCAA-GTGAGAA  948

seq1  GCATGGGTGCCCCTCCA-GGGAACTGGCTTCAGTTGCTAAGTTCACCCTT  998
      ||||||||| ||||||| ||||||||||||||  |||||   ||||||||
seq2  GCATGGGTG-CCCTCCAGGGGAACTGGCTTCAAGTGCTA--GTCACCCTT  995

seq1  TCTGTGTGACCTGCTTCTCCTGGCTTAACCCTGTGGACTGTGGAAGGGAC  1048
      ||||||||| |||||||| ||||||||||||||||||||| |  ||||| 
seq2  TCTGTGTGA-CTGCTTCTTCTGGCTTAACCCTGTGGACTG-GTGAGGGAT  1043

seq1  CAAGGAAAATTAGAGAAAGTACTGGTCTGA  1078
      ||||| |||| |||||||||||||||||||
seq2  CAAGGGAAATAAGAGAAAGTACTGGTCTGA  1073