BAC Information

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BAC

Clone NameB6Ng01-155A11
Chromosome7 (Build37)
Map Location 103,234,018 - 103,363,371
singlet/doubletdoublet
Overlap geneEG666836, Odz4
Upstream geneLOC666823, Frda-ps
Downstream geneLOC670727, LOC666858, Nars2, Gab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155A11.bB6Ng01-155A11.g
ACCDH949916DH949917
length1,0851,125
definitionDH949916|Mus musculus domesticus DNA, BAC clone: B6Ng01-155A11, 5' end.DH949917|Mus musculus domesticus DNA, BAC clone: B6Ng01-155A11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,362,288 - 103,363,371)(103,234,018 - 103,235,162)
sequence
gaattctgtcaggagaaagggacccagtgaagcacaaattctaacaaaac
tggaaatgacttttctaagaaaagagaagatatttttgtgtcaagcactt
gaagctggttttaaatagactttggatgcaatgttgctggttctttgggc
gctgttgatttatttccatgcctaacctcacccaacaaatgtacatcatt
ggagaaagttgaaagaagccggtaagaatgatcaccggtgacacttgctc
gaagtttaatgggtgccggtgctttcttacagaacggtagaatagatggc
agtatcatattttgcagaagagaagtggccctccccacaaaacctgccta
agacctcacagtctcaatcccccaaatctgtaagtcccacctccattaaa
aagctcccacgaaaggctgaagggattatactaaaaagaattaaactcta
atggaaagagtcctctaacccaatacctacccttctgttaaaacctctgc
tcactgcctacaattccaggtcattccatttgctgtactctcagggttcc
tccttaaactaagcactgattgtgaacccccaacccttagcaaagactga
ctctttcctccacagggtactttcatggcttaatgcccaaagcctacttc
cacccggagaagacttgattaaaaaagcaggactggcaacccaagaacat
gaggaatctctagagaatggaatctcaccatccctgacaccttctccacc
ccagaacagtaatctcacaaactgtcctgcctctaatcccactcactcta
atacccattccagcagcttttcgctgctaccgaatcagatacagttgcat
ccccactctaaacagtcacaagagcggacaagcggcacagacccagtccc
actaggagaagggtttccttgtcacccccaccaaagaaaacaggttcttt
acagtagtcctacagctcctagaaagagcgaaatccggctttcatgctag
agtctggctggtcggatcgccacccccacccactgctcgctctctctctt
ctctctctccactcttctctctgctctctctctct
gaattccaagaagccagagaggattaacacacaacttgcagaattaggtg
atttcaatggaaagtgttctcaacacatgaccagattagcaaaaattgag
tctcagctgtgtgaccttagacccatgatataaactccatatagctcaat
ttccttacctactaatcagatatagtaatcacagttaggactcctactgt
ggtgagcgagatttgatgaacagcaatggtgggtgaagttgggccctcct
tttatgttctgtccatctttcctaagattcctacatcttactcaaatggc
cactgttcttttttttaagatttttttttatgtatatgagtacactgtag
ctgaagaggacatcccatcccattacagatggttgtgagccaccatgtgg
tttctgggaattgaactcaggacctctggaagagcagccggtgctcttaa
ccgctgagccatctctccagccccactactgttctaacttcatgaacaaa
ccatgtttttacttcgatgtctgagagaggaattgacacacacaacagac
acacacagacacacacacacacaaacagaaagaatttcagcattgagtat
aggagttattgccccactatggggtcggcttcccctctcacatctgaaaa
aactcacatcacacattattcacaattatcaaagctaagtgtgatgcatc
cccattcttgtggagtttagtgacttaacactaggggtagagttgcccgg
gaccagggcggtggggttgatgggaagctgagggaaatgtaaatgtaaaa
ctaaagacagagcgtgcatgttcttttgctggcatttggcaggaaacaga
cccagaccactttgtgggatttttctttcttctttgcaaacaggaggatt
tcttaaggggagtgagtaccaggaaaacttccagggaagaagctctgaat
aagctctcaggtccacaagtactgacttgcattctgcgggctggtcagct
aacaagtacagttggtgtttcccggtgctcactgccttatgatattaaag
taataaatgtcacagcagggttacgatcttgttacatgtaagtcctgaaa
cgctcatgaagtgagctgatgccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_103362288_103363371
seq2: B6Ng01-155A11.b_44_1128 (reverse)

seq1  AGAGAGAGAGAG-AGAGAGA------GAGAGAGAGAGAGAGAGAGAGCGA  43
      |||||||||||| |||||||      |||||||||| |||||||||||||
seq2  AGAGAGAGAGAGCAGAGAGAAGAGTGGAGAGAGAGA-AGAGAGAGAGCGA  49

seq1  GCAGTGGGGTGGGGGTGGGCGGTTCCGACCAGGCCAGACTCTAGCATGAA  93
      ||||| ||||||||||||   | |||||||| ||||||||||||||||||
seq2  GCAGT-GGGTGGGGGTGG--CGATCCGACCA-GCCAGACTCTAGCATGAA  95

seq1  AGCCGGATTTCGCTCTTTCTAGGAGCTGTAGGACTACTGTAAAGAACCTG  143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGATTTCGCTCTTTCTAGGAGCTGTAGGACTACTGTAAAGAACCTG  145

seq1  TTTTCTTTGGTGGGGGTGACAAGGAAACCCTTTCTCCTAGTGGGACTGGG  193
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTTCTTTGGTGGGGGTGACAAGGAAACCC-TTCTCCTAGTGGGACTGGG  194

seq1  TCTGTGCCGCTTGTCCGCTCTTGTGACTGTTTAGAGTGGGGATGCAACTG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCCGCTTGTCCGCTCTTGTGACTGTTTAGAGTGGGGATGCAACTG  244

seq1  TATCTGATTCGGTAGCAGCGAAAAGCTGCTGGAATGGGTATTAGAGTGAG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATTCGGTAGCAGCGAAAAGCTGCTGGAATGGGTATTAGAGTGAG  294

seq1  TGGGATTAGAGGCAGGACAGTTTGTGAGATTACTGTTCTGGGGTGGAGAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTAGAGGCAGGACAGTTTGTGAGATTACTGTTCTGGGGTGGAGAA  344

seq1  GGTGTCAGGGATGGTGAGATTCCATTCTCTAGAGATTCCTCATGTTCTTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCAGGGATGGTGAGATTCCATTCTCTAGAGATTCCTCATGTTCTTG  394

seq1  GGTTGCCAGTCCTGCTTTTTTAATCAAGTCTTCTCCGGGTGGAAGTAGGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCCAGTCCTGCTTTTTTAATCAAGTCTTCTCCGGGTGGAAGTAGGC  444

seq1  TTTGGGCATTAAGCCATGAAAGTACCCTGTGGAGGAAAGAGTCAGTCTTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCATTAAGCCATGAAAGTACCCTGTGGAGGAAAGAGTCAGTCTTT  494

seq1  GCTAAGGGTTGGGGGTTCACAATCAGTGCTTAGTTTAAGGAGGAACCCTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGGGTTGGGGGTTCACAATCAGTGCTTAGTTTAAGGAGGAACCCTG  544

seq1  AGAGTACAGCAAATGGAATGACCTGGAATTGTAGGCAGTGAGCAGAGGTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACAGCAAATGGAATGACCTGGAATTGTAGGCAGTGAGCAGAGGTT  594

seq1  TTAACAGAAGGGTAGGTATTGGGTTAGAGGACTCTTTCCATTAGAGTTTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGAAGGGTAGGTATTGGGTTAGAGGACTCTTTCCATTAGAGTTTA  644

seq1  ATTCTTTTTAGTATAATCCCTTCAGCCTTTCGTGGGAGCTTTTTAATGGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTTAGTATAATCCCTTCAGCCTTTCGTGGGAGCTTTTTAATGGA  694

seq1  GGTGGGACTTACAGATTTGGGGGATTGAGACTGTGAGGTCTTAGGCAGGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGACTTACAGATTTGGGGGATTGAGACTGTGAGGTCTTAGGCAGGT  744

seq1  TTTGTGGGGAGGGCCACTTCTCTTCTGCAAAATATGATACTGCCATCTAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGGGAGGGCCACTTCTCTTCTGCAAAATATGATACTGCCATCTAT  794

seq1  TCTACCGTTCTGTAAGAAAGCACCGGCACCCATTAAACTTCGAGCAAGTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCGTTCTGTAAGAAAGCACCGGCACCCATTAAACTTCGAGCAAGTG  844

seq1  TCACCGGTGATCATTCTTACCGGCTTCTTTCAACTTTCTCCAATGATGTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCGGTGATCATTCTTACCGGCTTCTTTCAACTTTCTCCAATGATGTA  894

seq1  CATTTGTTGGGTGAGGTTAGGCATGGAAATAAATCAACAGCGCCCAAAGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTGGGTGAGGTTAGGCATGGAAATAAATCAACAGCGCCCAAAGA  944

seq1  ACCAGCAACATTGCATCCAAAGTCTATTTAAAACCAGCTTCAAGTGCTTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAACATTGCATCCAAAGTCTATTTAAAACCAGCTTCAAGTGCTTG  994

seq1  ACACAAAAATATCTTCTCTTTTCTTAGAAAAGTCATTTCCAGTTTTGTTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAAATATCTTCTCTTTTCTTAGAAAAGTCATTTCCAGTTTTGTTA  1044

seq1  GAATTTGTGCTTCACTGGGTCCCTTTCTCCTGACAGAATTC  1084
      |||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGTGCTTCACTGGGTCCCTTTCTCCTGACAGAATTC  1085

seq1: chr7_103234018_103235162
seq2: B6Ng01-155A11.g_67_1191

seq1  GAATTCCAAGAAGCCAGAGAGGATTAACACACAACTTGCAGAATTAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAAGCCAGAGAGGATTAACACACAACTTGCAGAATTAGGTG  50

seq1  ATTTCAATGGAAAGTGTTCTCAACACATGACCAGATTAGCAAAAATTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAATGGAAAGTGTTCTCAACACATGACCAGATTAGCAAAAATTGAG  100

seq1  TCTCAGCTGTGTGACCTTAGACCCATGATATAAACTCCATATAGCTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTGTGTGACCTTAGACCCATGATATAAACTCCATATAGCTCAAT  150

seq1  TTCCTTACCTACTAATCAGATATAGTAATCACAGTTAGGACTCCTACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTACCTACTAATCAGATATAGTAATCACAGTTAGGACTCCTACTGT  200

seq1  GGTGAGCGAGATTTGATGAACAGCAATGGTGGGTGAAGTTGGGCCCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGCGAGATTTGATGAACAGCAATGGTGGGTGAAGTTGGGCCCTCCT  250

seq1  TTTATGTTCTGTCCATCTTTCCTAAGATTCCTACATCTTACTCAAATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTCTGTCCATCTTTCCTAAGATTCCTACATCTTACTCAAATGGC  300

seq1  CACTGTTCTTTTTTTTAAGATTTTTTTTTATGTATATGAGTACACTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTCTTTTTTTTAAGATTTTTTTTTATGTATATGAGTACACTGTAG  350

seq1  CTGAAGAGGACATCCCATCCCATTACAGATGGTTGTGAGCCACCATGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAGGACATCCCATCCCATTACAGATGGTTGTGAGCCACCATGTGG  400

seq1  TTTCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCGGTGCTCTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCGGTGCTCTTAA  450

seq1  CCGCTGAGCCATCTCTCCAGCCCCACTACTGTTCTAACTTCATGAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGAGCCATCTCTCCAGCCCCACTACTGTTCTAACTTCATGAACAAA  500

seq1  CCATGTTTTTACTTCGATGTCTGAGAGAGGAATTGACACACACAACAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTTTTACTTCGATGTCTGAGAGAGGAATTGACACACACAACAGAC  550

seq1  ACACACAGACACACACACACACAAACAGAAAGAATTTCAGCATTGAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAGACACACACACACACAAACAGAAAGAATTTCAGCATTGAGTAT  600

seq1  AGGAGTTATTGCCCCACTATGGGGTCGGCTTCCCCTCTCACATCTGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTATTGCCCCACTATGGGGTCGGCTTCCCCTCTCACATCTGAAAA  650

seq1  AACTCACATCACACATTATTCACAATTATCAAAGCTAAGTGTGATGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACATCACACATTATTCACAATTATCAAAGCTAAGTGTGATGCATC  700

seq1  CCCATTCTTGTGGAGTTTAGTGACTTAACACTAGGGGTAGAGTTGCCCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCTTGTGGAGTTTAGTGACTTAACACTAGGGGTAGAGTTGCCCGG  750

seq1  GACCAGGGCGGTGGGGTTGATGGGAAGCTGAGGGAAATGTAAATGTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGGCGGTGGGGTTGATGGGAAGCTGAGGGAAATGTAAATGTAAAA  800

seq1  CTAAAGACAGAGCGTGCATGTTCTTTTGCTGGCATTTGGCAGGAAACAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGACAGAGCGTGCATGTTCTTTTGCTGGCATTTGGCAGGAAACAGA  850

seq1  CCCAGACCACTTTGTGGGA-TTTTCTTCCTTCTTTGCAAACAAGAGGA-T  898
      ||||||||||||||||||| ||||||| |||||||||||||| ||||| |
seq2  CCCAGACCACTTTGTGGGATTTTTCTTTCTTCTTTGCAAACAGGAGGATT  900

seq1  TCCTAAGGGGAGTGAGTACCAGGAAAACTTCCAGGGAAGAAGCTCTGAAA  948
      || |||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTTAAGGGGAGTGAGTACCAGGAAAACTTCCAGGGAAGAAGCTCTGAA-  949

seq1  TAAAGCTCTCAGGTTCCACAAAGTACTGACTTGCATTCTGCGGGGCTGGG  998
        ||||||||||| ||||| ||||||||||||||||||||| ||||| ||
seq2  -TAAGCTCTCAGG-TCCAC-AAGTACTGACTTGCATTCTGC-GGGCT-GG  994

seq1  TCAGCTAACACAGTACAGTGGGTGTTTCCCGGTGCTCACTGGCTTATGAA  1048
      |||||||||| |||||||| ||||||||||||||||||||| |||||| |
seq2  TCAGCTAACA-AGTACAGTTGGTGTTTCCCGGTGCTCACTGCCTTATG-A  1042

seq1  TATTTAAAGGTAATAAATGTCACAGTAAGTGTTTAACGATCTTGTTTACA  1098
      ||||  || ||||||||||||||||  || |||  ||||||||| |||||
seq2  TATT--AAAGTAATAAATGTCACAG-CAGGGTT--ACGATCTTG-TTACA  1086

seq1  TGTAAAAGTCCTTGAGAAGGGTCTATTGAAGATGAAGCTGATGCCAA  1145
      |||  |||||||   |||  | ||  ||||| || ||||||||||||
seq2  TGT--AAGTCCT---GAAACG-CTCATGAAG-TG-AGCTGATGCCAA  1125