BAC Information

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BAC

Clone NameB6Ng01-157B17
Chromosome7 (Build37)
Map Location 151,978,335 - 152,081,586
singlet/doubletdoublet
Overlap geneFgf3, Fgf4
Upstream geneNadsyn1, Dhcr7, Gm498, Shank2, Cttn, Ppfia1, Fadd, Tmem16a, LOC669079, LOC677315
Downstream geneFgf15, Oraov1, Ccnd1, 1810010D01Rik, LOC100040049, Tpcn2, Mrgprf, Mrgprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157B17.bB6Ng01-157B17.g
ACCDH951432DH951433
length9361,063
definitionDH951432|Mus musculus domesticus DNA, BAC clone: B6Ng01-157B17, 5' end.DH951433|Mus musculus domesticus DNA, BAC clone: B6Ng01-157B17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,978,335 - 151,979,141)(152,080,517 - 152,081,586)
sequence
gaattccacattatttccaaaaaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagcca
gaagaagccagaagaagccgggcgtggtggcacacgcctttaatcccagc
actcaggaggcagaggcaggcagatttctgagttcaaggccaacctggtc
tacaaaagtgagtcccaggacagccagggctatacagagaaaccctgtct
cgaaaaacaaaaacaaaaacaaagaagccagaagaaaaattgctaggtga
taaataagccaaaaactaaaataagttttgaatagaggcgcctcccaagg
gtaagtggtaaatgtgctccaggaagcgatcatacatcattaaatgaaaa
tctcagggctgggagtgggctgcctccttattagcagttggtcagggagg
ccccaaatgccctcacgacagtgcaggcgatcaacttccgctgctcttgg
ttgctctatgagaatgagatagttaagccctgcgggttaagacataacac
acctgcaggacagagaggtttcaagctgggttaagctagacactagccta
catagtgccagaaggtgccgagaggccactcagtggtggatcctgtgtga
gactataccaattggcaggcaaggtaagaccactaaagcaatagtggcat
tactgttgtggcgcagatccccatctcattggatctgatgcctgcgccac
agaagggagctgtcaactctagcaacagtccgagactgagagctcgcaga
ccctagaggggaagctgctgctgtttttccgctcaatggacaggctatgc
ctgtaacactgcctctaatcaactgtgcttgtgctcgtagattagcgctg
ccctcagctttggccacagaagcttcattctgaagt
gaattcccctgcctgaaagaaagggtcctcgcagggggctttggctcagc
gcttatcctttctcattatgcctccaaccccccaactcctgtatgtgggg
ccccaggaggctggtttgggtaaaaaggtactggcctagctccgtggtga
tgggaggtctgtctgcaggggcgggacagcagagaaatggcagatctgat
gaatctcaatgaggaacacgccactttcagacgccatcagtgactggcat
taatgacggagctctgggagaatgtcatcaggaaagcctttacaaaaaga
catcaccgaaggctctcaggaccggggactcccatgctgtgaggcttgtt
ttagagagcgatgtctcctgtaaaatctaattacttctcccttgtgattc
tcaatcgacagcgcgggctattaatcttaattgccttctcctgacgcttt
tgttttaatgtccgtgataaatgtggggtaccagggaggttggcagaggc
tttactgaagagtccccccaaattgggctggagggtggcatgcgggtggc
agcaccccatccccactctgcgcccttctcagggactcccagaagagtta
gagatgttggtaatggagtgatcagaggaaagtctgttgggtcactgggg
gccgccataagaacattcttctccagggcgggttttacttccacctctga
acaaggtagaaaatgggactctgggaaagtgacagagcgcccccaaggat
gcacatcgtaagaggtgaagatggagccttgtttgtgacaaaggcaggat
ggcctgtctcagagcacaggagtgacagtggatcacagatggctactccc
tgggcacatggtgaactcttgccagttacatcagcctgcttttgggctta
acttgtgtggttgggaagagtagacataggagtcctaagatctctctgtg
tatagaggagctgtgctttcacacggagagcgagagtctattaagtggct
ttttaaaatacagcaatgtggggacgaatcgcaaggggtgagtggcgtgc
caggaaatttgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_151978335_151979141
seq2: B6Ng01-157B17.b_47_856

seq1  GAATTCCACATTATTTCCAAAA---AAGAAGAAGAAGAAGAAGAAGAAGA  47
      ||||||||||||||||||||||   |||||||||||||||||||||||||
seq2  GAATTCCACATTATTTCCAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGA  50

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCCA  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCCA  100

seq1  GAAGAAGCCAGAAGAAGCCGGGCGTGGTGGCACACGCCTTTAATCCCAGC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGCCAGAAGAAGCCGGGCGTGGTGGCACACGCCTTTAATCCCAGC  150

seq1  ACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAACCTGGTC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAACCTGGTC  200

seq1  TACAAAAGTGAGTCCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAGTGAGTCCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCT  250

seq1  CGAAAAACAAAAACAAAAACAAAGAAGCCAGAAGAAAAATTGCTAGGTGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAACAAAAACAAAAACAAAGAAGCCAGAAGAAAAATTGCTAGGTGA  300

seq1  TAAATAAGCCAAAAACTAAAATAAGTTTTGAATAGAGGCGCCTCCCAAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGCCAAAAACTAAAATAAGTTTTGAATAGAGGCGCCTCCCAAGG  350

seq1  GTAAGTGGTAAATGTGCTCCAGGAAGCGATCATACATCATTAAATGAAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGGTAAATGTGCTCCAGGAAGCGATCATACATCATTAAATGAAAA  400

seq1  TCTCAGGGCTGGGAGTGGGCTGCCTCCTTATTAGCAGTTGGTCAGGGAGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGCTGGGAGTGGGCTGCCTCCTTATTAGCAGTTGGTCAGGGAGG  450

seq1  CCCCAAATGCCCTCACGACAGTGCAGGCGATCAACTTCCGCTGCTCTTGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATGCCCTCACGACAGTGCAGGCGATCAACTTCCGCTGCTCTTGG  500

seq1  TTGCTCTATGAGAATGAGATAGTTAAGCCCTGCGGGTTAAGACATAACAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTATGAGAATGAGATAGTTAAGCCCTGCGGGTTAAGACATAACAC  550

seq1  ACCTGCAGGACAGAGAGGTTTCAAGCTGGGTTAAGCTAGACACTAGCCTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCAGGACAGAGAGGTTTCAAGCTGGGTTAAGCTAGACACTAGCCTA  600

seq1  CATAGTGCCAGAAGGTGCCGAGAGGCCACTCAGTGGTGGATCCTGTGTGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGCCAGAAGGTGCCGAGAGGCCACTCAGTGGTGGATCCTGTGTGA  650

seq1  GACTATACCAATTGGCAGGCAAGGTAAGACCACTAAAGCAATAGTGGCAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATACCAATTGGCAGGCAAGGTAAGACCACTAAAGCAATAGTGGCAT  700

seq1  TACTGTTGTGGCGCAGATCCCCATCTCATTGGATCTGATGCCTGCGCCAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTGTGGCGCAGATCCCCATCTCATTGGATCTGATGCCTGCGCCAC  750

seq1  AGAAGGGAGCTGTCAACTCCAGCAACAGTCCGAGACTGAGAGCTCGCAGA  797
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAAGGGAGCTGTCAACTCTAGCAACAGTCCGAGACTGAGAGCTCGCAGA  800

seq1  CCCTAGAGGG  807
      ||||||||||
seq2  CCCTAGAGGG  810

seq1: chr7_152080517_152081586
seq2: B6Ng01-157B17.g_68_1130 (reverse)

seq1  ATCAGAATTTCCTGGGCACGCCCACCTCACACCCTGCGATTCGTTCCCAC  50
      |||| |||||||| ||||||||   ||||| || |||||||||| |||||
seq2  ATCA-AATTTCCT-GGCACGCC--ACTCACCCCTTGCGATTCGTCCCCAC  46

seq1  ATTGCTGTAATTATAAAAAGCCACTTAATAGACTCTCGCTCTCCGTGTGA  100
      |||||||| ||| |||||||||||||||||||||||||||||||||||| 
seq2  ATTGCTGT-ATTTTAAAAAGCCACTTAATAGACTCTCGCTCTCCGTGTG-  94

seq1  AAAGCACAGGCTCTTCTATACACAGAGAGATCTTAGGACTCCTATGTCTA  150
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  AAAGCACA-GCTCCTCTATACACAGAGAGATCTTAGGACTCCTATGTCTA  143

seq1  CTCTTCCAAACAACACAAGTTAAGCCCAAAAGCAGGCTGATGTAACTGGC  200
      ||||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCAACCACACAAGTTAAGCCCAAAAGCAGGCTGATGTAACTGGC  193

seq1  AAGAGTTCACCATGTGCCCAGGGAGTAGCCATCTGTGGATCCACTGTCAC  250
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAGAGTTCACCATGTGCCCAGGGAGTAGCCATCTGT-GATCCACTGTCAC  242

seq1  TCCTGTGCTCTGAGACAGGCCATCCTGCCTTTGTCACAAACAAGGCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGCTCTGAGACAGGCCATCCTGCCTTTGTCACAAACAAGGCTCCA  292

seq1  TCTTCACCTCTTACGATGTGCATCCTTGGGGGCGCTCTGTCACTTT-CCA  349
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTTCACCTCTTACGATGTGCATCCTTGGGGGCGCTCTGTCACTTTCCCA  342

seq1  GAGTCCCATTTTCTACCTTGTTCAGAGGTGGAAGTAAAACCCGCCCTGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCCATTTTCTACCTTGTTCAGAGGTGGAAGTAAAACCCGCCCTGGA  392

seq1  GAAGAATGTTCTTATGGCGGCCCCCAGTGACCCAACAGACTTTCCTCTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGTTCTTATGGCGGCCCCCAGTGACCCAACAGACTTTCCTCTGA  442

seq1  TCACTCCATTACCAACATCTCTAACTCTTCTGGGAGTCCCTGAGAAGGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCATTACCAACATCTCTAACTCTTCTGGGAGTCCCTGAGAAGGGC  492

seq1  GCAGAGTGGGGATGGGGTGCTGCCACCCGCATGCCACCCTCCAGCCCAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTGGGGATGGGGTGCTGCCACCCGCATGCCACCCTCCAGCCCAAT  542

seq1  TTGGGGGGACTCTTCAGTAAAGCCTCTGCCAACCTCCCTGGTACCCCACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGGACTCTTCAGTAAAGCCTCTGCCAACCTCCCTGGTACCCCACA  592

seq1  TTTATCACGGACATTAAAACAAAAGCGTCAGGAGAAGGCAATTAAGATTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCACGGACATTAAAACAAAAGCGTCAGGAGAAGGCAATTAAGATTA  642

seq1  ATAGCCCGCGCTGTCGATTGAGAATCACAAGGGAGAAGTAATTAGATTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCGCGCTGTCGATTGAGAATCACAAGGGAGAAGTAATTAGATTTT  692

seq1  ACAGGAGACATCGCTCTCTAAAACAAGCCTCACAGCATGGGAGTCCCCGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGACATCGCTCTCTAAAACAAGCCTCACAGCATGGGAGTCCCCGG  742

seq1  TCCTGAGAGCCTTCGGTGATGTCTTTTTGTAAAGGCTTTCCTGATGACAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGAGCCTTCGGTGATGTCTTTTTGTAAAGGCTTTCCTGATGACAT  792

seq1  TCTCCCAGAGCTCCGTCATTAATGCCAGTCACTGATGGCGTCTGAAAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAGAGCTCCGTCATTAATGCCAGTCACTGATGGCGTCTGAAAGTG  842

seq1  GCGTGTTCCTCATTGAGATTCATCAGATCTGCCATTTCTCTGCTGTCCCG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGTTCCTCATTGAGATTCATCAGATCTGCCATTTCTCTGCTGTCCCG  892

seq1  CCCCTGCAGACAGACCTCCCATCACCACGGAGCTAGGCCAGTACCTTTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCAGACAGACCTCCCATCACCACGGAGCTAGGCCAGTACCTTTTT  942

seq1  ACCCAAACCAGCCTCCTGGGGCCCCACATACAGGAGTTGGGGGGTTGGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAACCAGCCTCCTGGGGCCCCACATACAGGAGTTGGGGGGTTGGAG  992

seq1  GCATAATGAGAAAGGATAAGCGCTGAGCCAAAGCCCCCTGCGAGGACCCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAATGAGAAAGGATAAGCGCTGAGCCAAAGCCCCCTGCGAGGACCCT  1042

seq1  TTCTTTCAGGCAGGGGAATTC  1070
      |||||||||||||||||||||
seq2  TTCTTTCAGGCAGGGGAATTC  1063