BAC Information

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BAC

Clone NameB6Ng01-157M16
Chromosome7 (Build37)
Map Location 90,393,592 - 90,394,712
singlet/doubletsinglet
Overlap genenone
Upstream geneSh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik
Downstream geneEG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157M16.bB6Ng01-157M16.g
ACCDH951931DH951932
length1,1081,223
definitionDH951931|Mus musculus domesticus DNA, BAC clone: B6Ng01-157M16, 5' end.DH951932|Mus musculus domesticus DNA, BAC clone: B6Ng01-157M16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagctatatactgttttgaaggaacacatttaatacaaaattata
aagaaacttcaaaataaaaagaaagctgaagatacatcaggataaataca
cacaaaaatagagagtggtattgtgattttgagtgtttaaggcaaaacca
acaaaatcctgaatatagaaatatgaaataatggtaagaggcatgattta
taaactcactattcataacactccctccaagcaggtaaataagtcaccat
cacatagcagaagagcacataaagcaagaattcttttgaatgcaaaggaa
gccttgctgaaacaaaatggatatcagccatcttgctattacccagttta
ggagcatttggtgtcagtgagcagaactctattcatcaagtcaggagtat
gccttgtcagagagagagtggtgagctcagtctattgctgtgcaatcagt
gtgagtggaaatgtgttccctgactggtgttactcaagaaacttgatgag
aataaactttcaagtgatacctgaatcagagaatatttacaaggaaaaag
tatgaatcggaaccacctttatcctgtgaaatgtaaggttggcatcacag
ttgatctggaggaagagaaaatcgccttggaactctgtattaagctaaag
agtcttgtgaagaaaaaaaaaaataacagaatagatgcacttattgagta
ctgtgtacatcaaaggaaaattaaatgtgtgcttaatggagacagaatct
atttcttttaaggtagaatcctaggacaaataaaatttaagaagtgtcct
tggaatatctggatcaagagggaaatacagaaaaaatagaaacaagaaaa
aagactttaaaagatggaaaaatggatgcatatccatagctttgtttaca
ttgtccaaatgcagaagcagtacaagtgttgactgatggatggttgctga
ggtacaaacaactcaacggaacagtactagtcagctttaaaagcaaaggg
ttgctgacccaggctatggtatgggtgatccttgagacagtgtgctggtt
aatagtcagactcagcaagccactgctgatgactcatttatatgcagctc
tgagctgc
gaattctggacgaaattcaagacagtctatcagaggtaaagcggggagag
agagtaggagcaaagagaaaacatggtgcaccaattaagcattcaggcct
ttccacgagtcttgaaccagaggaaaagttaatgtcagggaagaatacct
ggggagagattggaaggaaggagaaggaaaaagaaaagaaaaaagatcaa
ttagcggaggtttctaggagagggaacttatacccgccactagatgagtt
taagcggctagctcttagtagctcagaatcagatgaaggacttagctcct
ctgaagaaacggacttggaggaggaagcagtttgttataagggagaaagg
taccagcaagataaaaagcgagctactcagtccagaaaaaggcaaaaagc
ggctgctcggcctccgaactgtcggcttcagggtcctagtgcacctcagt
cctatgtgcagaggtaccattcagagccttatgtgcagaggtatcattca
gattcattcattccaaaagagaaacagagaaaagtgcagcaagcattctc
agtttttgaaggagctgagggagggcgtgttcacgctcctgtagagtata
tacagattaaggagctcacagaagcagttcgcaattatggagtcagcgct
aatttcactatagcacaagtcgaaaggcttgcgactcacgctatgactcc
tggtgattggcagagtgtagtaaaagctgcagctgccagtatgggaatgt
atcttgagtggaaagccttatggcaggactcctgctagatgcaggcaagg
gccaatgccgccatggaaggggaccaaagaacgtggacgtttgaattact
tataggtcaggacagcatgctgctaaccaaacagattatcattggggagc
atacgctcagatctcagctgccacagttaaagcatggaagcactctctaa
gaaggaagagcaagtgggcatttgaccagatactcaggtgcacagagtcc
ttctcagactttgtgccagaatgacgagcagcagagatatttggagaacc
agagcagctatgccttattgaacattggtttatgacagctacgcagattc
aatagccaattaacctagaaagaataggtaagaactggttaggttgcctg
agccttgaaggcgcgcttatcataagtcctggaatgtgcagccctattcc
tcgccagcgaagagagagtctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90393592_90394712
seq2: B6Ng01-157M16.b_47_1154

seq1  GAATTCAGCTATATACTGTTTTGAAGGAACACATTTAATACAAAATTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTATATACTGTTTTGAAGGAACACATTTAATACAAAATTATA  50

seq1  AAGAAACTTCAAAATAAAAAGAAAGCTGAAGATACATCAGGATAAATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTTCAAAATAAAAAGAAAGCTGAAGATACATCAGGATAAATACA  100

seq1  CACAAAAATAGAGAGTGGTATTGTGATTTTGAGTGTTTAAGGCAAAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAATAGAGAGTGGTATTGTGATTTTGAGTGTTTAAGGCAAAACCA  150

seq1  ACAAAATCCTGAATATAGAAATATGAAATAATGGTAAGAGGCATGATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCCTGAATATAGAAATATGAAATAATGGTAAGAGGCATGATTTA  200

seq1  TAAACTCACTATTCATAACACTCCCTCCAAGCAGGTAAATAAGTCACCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCACTATTCATAACACTCCCTCCAAGCAGGTAAATAAGTCACCAT  250

seq1  CACATAGCAGAAGAGCACATAAAGCAAGAATTCTTTTGAATGCAAAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGCAGAAGAGCACATAAAGCAAGAATTCTTTTGAATGCAAAGGAA  300

seq1  GCCTTGCTGAAACAAAATGGATATCAGCCATCTTGCTATTACCCAGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCTGAAACAAAATGGATATCAGCCATCTTGCTATTACCCAGTTTA  350

seq1  GGAGCATTTGGTGTCAGTGAGCAGAACTCTATTCATCAAGTCAGGAGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATTTGGTGTCAGTGAGCAGAACTCTATTCATCAAGTCAGGAGTAT  400

seq1  GCCTTGTCAGAGAGAGAGTGGTGAGCTCAGTCTATTGCTGTGCAATCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTCAGAGAGAGAGTGGTGAGCTCAGTCTATTGCTGTGCAATCAGT  450

seq1  GTGAGTGGAAATGTGTTCCCTGACTGGTGTTACTCAAGAAACTTGATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGGAAATGTGTTCCCTGACTGGTGTTACTCAAGAAACTTGATGAG  500

seq1  AATAAACTTTCAAGTGATACCTGAATCAGAGAATATTTACAAGGAAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACTTTCAAGTGATACCTGAATCAGAGAATATTTACAAGGAAAAAG  550

seq1  TATGAATCGGAACCACCTTTATCCTGTGAAATGTAAGGTTGGCATCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATCGGAACCACCTTTATCCTGTGAAATGTAAGGTTGGCATCACAG  600

seq1  TTGATCTGGAGGAAGAGAAAATCGCCTTGGAACTCTGTATTAAGCTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTGGAGGAAGAGAAAATCGCCTTGGAACTCTGTATTAAGCTAAAG  650

seq1  AGTCTTGTGAAGAAAAAAAAAAATAACAGAATAGATGCACTTATTGAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGTGAAGAAAAAAAAAAATAACAGAATAGATGCACTTATTGAGTA  700

seq1  CTGTGTACATCAAAGGAAAATTAAATGTGTGCTTAATGGAGACAGAATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTACATCAAAGGAAAATTAAATGTGTGCTTAATGGAGACAGAATCT  750

seq1  ATTTCTTTTAAGGTAGAATCCTAGGACAAATAAAATTTAAGAAGTGTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTTAAGGTAGAATCCTAGGACAAATAAAATTTAAGAAGTGTCCT  800

seq1  TGGAATATCTGGATCAAGAGGGAAATACAGAAAAAATAGAAACAAGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATATCTGGATCAAGAGGGAAATACAGAAAAAATAGAAACAAGAAAA  850

seq1  AAGAACTTTAAAAGATGGAAAAATGGATGCATATCCATAGCTTTGTTTAC  900
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAG-ACTTTAAAAGATGGAAAAATGGATGCATATCCATAGCTTTGTTTAC  899

seq1  ATTGTCCAAAATGCAGAAGCAGTACAAGTGTTGACTGATGGATGGTTGCT  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCC-AAATGCAGAAGCAGTACAAGTGTTGACTGATGGATGGTTGCT  948

seq1  GAGGTACAAACAACTCAACGGAACAGTAACTAGTCAGCTTTAAAAGCAAA  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAGGTACAAACAACTCAACGGAACAGT-ACTAGTCAGCTTTAAAAGCAAA  997

seq1  GGGGTTGCTGACCCAGGCTATGGTATGGGTGATCCTTGAGGACAGTGTGC  1050
       |||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  -GGGTTGCTGACCCAGGCTATGGTATGGGTGATCCTTGA-GACAGTGTGC  1045

seq1  TGTGTTAAATAAGTCAGACATCAGCAAGCCACTGCTGAGTGACTCCATTT  1100
      || |||||   |||||||| |||||||||||||||||| ||||| |||||
seq2  TG-GTTAA--TAGTCAGAC-TCAGCAAGCCACTGCTGA-TGACT-CATTT  1089

seq1  ATATGCAGCTCCTAGAGCTGC  1121
      |||||||||||   |||||||
seq2  ATATGCAGCTC--TGAGCTGC  1108