BAC Information

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BAC

Clone NameB6Ng01-159G18
Chromosome7 (Build37)
Map Location 144,199,751 - 144,200,943
singlet/doubletsinglet
Overlap geneMgmt
Upstream geneLOC546009, EG621677, EG668771
Downstream geneEG621804, Ebf3, 9430038I01Rik, Txnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159G18.bB6Ng01-159G18.g
ACCDH953091DH953092
length1,1721,068
definitionDH953091|Mus musculus domesticus DNA, BAC clone: B6Ng01-159G18, 5' end.DH953092|Mus musculus domesticus DNA, BAC clone: B6Ng01-159G18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactggcaatctgtgtgtcaagaaaacatgtatgtggcaggtgcc
aggatctgcctgtggctttctttccatgccttttctttgcttttcaaacc
ccaaagcaaaccaaagtccctcagagtctctgagtctttgttttcctgtt
aggttgccatcagcttcccagtcttcctcaagcatgctgcctttggtggc
cagtctccaggcatagtgatgtggcatttcactctcctgatggccagtcc
gtacctcactcagtgtgtacttccaatatgatttccgagctcagatctaa
ccctggtgataaatggaaacacccgtcaagtgctttgaccctcaagcagc
ctggtgctcctgccacaatcataaggcttgctgagggcagagcagtgctc
ttgttttagcaatacacacacacacactctatcatcacacacacacacca
ttatcacacacatgccatcatccagttaatctgcacagaaaagggagtgg
cataagagtgccacagtatccccagaccatgcatcttacttgtttctgag
agtcacctctggtcggggctaacactaccatttcagcacaactctgtcct
tctgtcagctgctcagcatctctcagccacacctgccctgagaaggccta
gacactaagcgtgctgaggacacagcttcttctagccaccagcagccaat
gatcaagtgtgcaccccacagggacaccgtgttcgttaagcaggctgcac
ttcacttagattggcggccactcactacacacagatggcaagtgagatca
aagaagtctctggattctacacacagcatggttgaagaatgtggaaggag
tctcactcctcttgcctgcagaatgatcccacattccccatttaagaatt
agcaaaacggctgagtaattaccacacttaagaatgtgtttaggaataac
ataaagaaatggcagagtgaaggagcagactattagcagaaatgctaatt
ggagtgcatcaattaaacctcaggagattagccttgtttttaatacaata
aacattttaaacgtaagaataaaaggcatgccttgttacacagctttcca
cggattgcactcaggtcagccgtctagaattcaaggccggttgcttgctt
taatggaacgtcttataattta
gaattctctgtttaactctgtaccccattttttaaaattgagctatttgg
tttttcagaggttaacttcttgagttctttatatattttggatattagcc
ctctgtcagatgtagaagattttttttcccattctgtaggttgccaattt
tattgatggcttcttttgccttacagaagctttttggcttcttgaggtcc
tatttatcaattgttgatcttagagtctgactcattggtgttctgttcag
gaaatttctccctgtgccaatgagtttgaggctcttacccactttttctt
ctattagagtcagtgtatctggttttatgttgaagtccttgatccacctg
gacttgagctttgtgccaggtgataaatacgggtctattttcattctcct
acatacagaccgccagttagaccagcgccatttattgaagatgctttctt
tttttccccactgtatgtttttggcttctttgtcaaagatcaagggttca
taggtatgtggacttacttttgggtctttgattgatccacctttctgtct
ctgtacaaataccatgcagttgttatcactgctgctttgtagttacagct
tgagactggggatggtgatttccttggaagttcttttgttgttgaaaatt
gttttggctatcctggattttttgtttttccatatgaagttgagaattgc
tctttccatgtctgtgaagagttgtgtgaggattttgaaggggattgcat
tgaatctgtagactgctgttggtaagatggctatttttactacgttaatt
ctaccaaaccatgagtatggggaggtcttttcatcttctgaggtctgatt
tatttttttctgggatttgtagtctggtcatacagctctttcagttgctt
ggtagagttacaccaatatattttatattatttgtggctattggtgaagg
gtgtttgttttttaacttttctccgcccgttctcatttgtggaaagggaa
ggctacggatttgtttgagtatttttatatcctcgcccctttgtccgagg
atgtgttatttagagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_144199751_144200943
seq2: B6Ng01-159G18.b_43_1214 (reverse)

seq1  TAAATAATAAGACGTCTCAAATAAAGCAAGCAACACGGCTTTGAAATTCT  50
      ||||| ||||||||| || | ||||||||||||| |||| ||| ||||||
seq2  TAAATTATAAGACGT-TCCATTAAAGCAAGCAAC-CGGCCTTG-AATTCT  47

seq1  AAGACCGGCTTGGACTGAGTGCATTCTGTTGGAAAGCTGGTGTACCAAGG  100
       ||| |||| ||  ||||||||| || | ||||||||| ||||| |||||
seq2  -AGA-CGGC-TGACCTGAGTGCAATCCG-TGGAAAGCT-GTGTAACAAGG  92

seq1  CATGCCTTTTTATCTTACGTTTAAAATGTTTTATTTGTATTAAAAACAAG  150
      ||||||||||  |||||||||||||||||||   ||||||||||||||||
seq2  CATGCCTTTTATTCTTACGTTTAAAATGTTT--ATTGTATTAAAAACAAG  140

seq1  GCTTAATCTCCTTGAGTTTAATTTGATGCACTCCAATTTAGCATTTCTGC  200
      || |||||||| |||| || | |||||||||||||| |||||||||||||
seq2  GC-TAATCTCC-TGAGGTTTAATTGATGCACTCCAA-TTAGCATTTCTGC  187

seq1  TTAATAGTCTGCTCCTTCACCTTCTTGCCCATTTCTTTATGTTATTCCTT  250
       |||||||||||||||||||  |||   |||||||||||||||||||| |
seq2  -TAATAGTCTGCTCCTTCAC--TCT--GCCATTTCTTTATGTTATTCC-T  231

seq1  AAACACATTCTTAAGTGTGGTAATTACCTCAGCCGTTTTTGCTAATTCTT  300
      |||||||||||||||||||||||||| |||||||| ||||||||||||||
seq2  AAACACATTCTTAAGTGTGGTAATTA-CTCAGCCG-TTTTGCTAATTCTT  279

seq1  AAATGGGGAATGTGGGATCATTCTGCAGGCAAGAGGAGTGAGACTCCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGGAATGTGGGATCATTCTGCAGGCAAGAGGAGTGAGACTCCTTC  329

seq1  CACCTTCTTCAACCATGCTGTGTGTAGAATCCAGAGACTTCTTTGATCTC  400
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCTTCAACCATGCTGTGTGTAGAATCCAGAGACTTCTTTGATCTC  379

seq1  ACTTGCCATCTGTGTGTAGTGAGTGGCCGCCAATCTAAGTGAAGTGCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCATCTGTGTGTAGTGAGTGGCCGCCAATCTAAGTGAAGTGCAGC  429

seq1  CTGCTTAACGAACACGGTGTCCCTGTGGGGTGCACACTTGATCATTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAACGAACACGGTGTCCCTGTGGGGTGCACACTTGATCATTGGCT  479

seq1  GCTGGTGGCTAGAAGAAGCTGTGTCCTCAGCACGCTTAGTGTCTAGGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGGCTAGAAGAAGCTGTGTCCTCAGCACGCTTAGTGTCTAGGCCT  529

seq1  TCTCAGGGCAGGTGTGGCTGAGAGATGCTGAGCAGCTGACAGAAGGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGCAGGTGTGGCTGAGAGATGCTGAGCAGCTGACAGAAGGACAG  579

seq1  AGTTGTGCTGAAATGGTAGTGTTAGCCCCGACCAGAGGTGACTCTCAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGCTGAAATGGTAGTGTTAGCCCCGACCAGAGGTGACTCTCAGAA  629

seq1  ACAAGTAAGATGCATGGTCTGGGGATACTGTGGCACTCTTATGCCACTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAAGATGCATGGTCTGGGGATACTGTGGCACTCTTATGCCACTCC  679

seq1  CTTTTCTGTGCAGATTAACTGGATGATGGCATGTGTGTGATAATGGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGTGCAGATTAACTGGATGATGGCATGTGTGTGATAATGGTGTG  729

seq1  TGTGTGTGATGATAGAGTGTGTGTGTGTGTATTGCTAAAACAAGAGCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGATGATAGAGTGTGTGTGTGTGTATTGCTAAAACAAGAGCACT  779

seq1  GCTCTGCCCTCAGCAAGCCTTATGATTGTGGCAGGAGCACCAGGCTGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCCCTCAGCAAGCCTTATGATTGTGGCAGGAGCACCAGGCTGCTT  829

seq1  GAGGGTCAAAGCACTTGACGGGTGTTTCCATTTATCACCAGGGTTAGATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCAAAGCACTTGACGGGTGTTTCCATTTATCACCAGGGTTAGATC  879

seq1  TGAGCTCGGAAATCATATTGGAAGTACACACTGAGTGAGGTACGGACTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCGGAAATCATATTGGAAGTACACACTGAGTGAGGTACGGACTGG  929

seq1  CCATCAGGAGAGTGAAATGCCACATCACTATGCCTGGAGACTGGCCACCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGGAGAGTGAAATGCCACATCACTATGCCTGGAGACTGGCCACCA  979

seq1  AAGGCAGCATGCTTGAGGAAGACTGGGAAGCTGATGGCAACCTAACAGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGCATGCTTGAGGAAGACTGGGAAGCTGATGGCAACCTAACAGGA  1029

seq1  AAACAAAGACTCAGAGACTCTGAGGGACTTTGGTTTGCTTTGGGGTTTGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGACTCAGAGACTCTGAGGGACTTTGGTTTGCTTTGGGGTTTGA  1079

seq1  AAAGCAAAGAAAAGGCATGGAAAGAAAGCCACAGGCAGATCCTGGCACCT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAGAAAAGGCATGGAAAGAAAGCCACAGGCAGATCCTGGCACCT  1129

seq1  GCCACATACATGTTTTCTTGACACACAGATTGCCAGTGAATTC  1193
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATACATGTTTTCTTGACACACAGATTGCCAGTGAATTC  1172