BAC Information

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BAC

Clone NameB6Ng01-165E22
Chromosome7 (Build37)
Map Location 119,392,553 - 119,555,293
singlet/doubletdoublet
Overlap geneMical2, Micalcl
Upstream geneLOC384658, Galntl4, LOC668399, LOC100042678, Usp47, Dkk3
Downstream geneParva, LOC627808, Tead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165E22.bB6Ng01-165E22.g
ACCDH957401DH957402
length944147
definitionDH957401|Mus musculus domesticus DNA, BAC clone: B6Ng01-165E22, 5' end.DH957402|Mus musculus domesticus DNA, BAC clone: B6Ng01-165E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,554,344 - 119,555,293)(119,392,553 - 119,392,699)
sequence
gaattccaccaatgtgctagagcatgcatggtccctacccccatgaataa
ataagcaaaaaacgtaattttttttaaaaaaaggaagatatagtctgagc
tgggtatggtggtacacacttattatctcagtacttgggaggctgaggac
agctacagagagagactttgaatgtgagaggggaggtgctttgagttcac
ctcaggctgggggctgtgcaagctaggatgggttcttcattcctatctgt
agcatgacttgctcaattgtgaggtgtgtgtcttcagcaggggccccaaa
tgtaccccatactcaccatccttgagcattttctgtcgtagtttctgctc
cagtctgctctgatgatcttctagttctagttcttgggccctgagtacaa
gaaaatgttccagccattaacaggggactgtgtgaaaacacaaatagagg
cacccatggaccagcagtcttttttttcccattaaaattggcatctttta
atatgtctaatagaaggtattgccactgttgcggccaccagaggtgccca
gaaagatggctgaaatgtgttggatttgagagaggatgagagaaatggag
agtggttgaaggccaccaaactgctctttagggtttgcctctgtggggaa
cagcagagcacagaatggagctgagtccccttggaaggtcagctggggac
ttggcttttgagcctggggatgccccagtcatttcctaccatgtcgatca
ccagatgctggcccatgcattgctggggggatccccaatgccactctgga
gttcagagaaatgaggatctagacaacgtggtgatgtcaagaggtgatag
tttgatgtatgtgatcctcagactagagaatataagtgttgagaggagaa
gcactgatgtccccaagggttcagcagcaagcagcccatgtacc
cactttgaaaacatcttaagacctgtgcctgcctttgttggcactcattc
agggccctgagctgaagggacacaggggaaatggcttagcctctccagga
acattcaggactcacaagaactaggttttgttgggggggggggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_119554344_119555293
seq2: B6Ng01-165E22.b_41_984 (reverse)

seq1  GGTACATGGGCTGCTGTGCCTGCTGAGCCCTTGGGGGACACTCAGTGCTT  50
      ||||||||||||||| || ||||||| ||||| ||||||| |||||||||
seq2  GGTACATGGGCTGCT-TG-CTGCTGAACCCTT-GGGGACA-TCAGTGCTT  46

seq1  CTCCTCTCAACCCTTTATTTTCTCTAGTCTTGAGGATCACATACCTCAAA  100
      ||||||||||| | |||| |||||||||| |||||||||||||| |||||
seq2  CTCCTCTCAACAC-TTATATTCTCTAGTC-TGAGGATCACATACATCAAA  94

seq1  CTATCACCTCTTGACATCACCACGTTGTCTAGATCCTCATTTCTCTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCACCTCTTGACATCACCACGTTGTCTAGATCCTCATTTCTCTGAAC  144

seq1  TCCAGAGTGGCATTGGGGATCCCCCCAGCAATGCATGGGCCAGCATCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGTGGCATTGGGGATCCCCCCAGCAATGCATGGGCCAGCATCTGG  194

seq1  TGATCGACATGGTAGGAAATGACTGGGGCATCCCCAGGCTCAAAAGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCGACATGGTAGGAAATGACTGGGGCATCCCCAGGCTCAAAAGCCAA  244

seq1  GTCCCCAGCTGACCTTCCAAGGGGACTCAGCTCCATTCTGTGCTCTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAGCTGACCTTCCAAGGGGACTCAGCTCCATTCTGTGCTCTGCTG  294

seq1  TTCCCCACAGAGGCAAACCCTAAAGAGCAGTTTGGTGGCCTTCAACCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACAGAGGCAAACCCTAAAGAGCAGTTTGGTGGCCTTCAACCACT  344

seq1  CTCCATTTCTCTCATCCTCTCTCAAATCCAACACATTTCAGCCATCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTCTCTCATCCTCTCTCAAATCCAACACATTTCAGCCATCTTTC  394

seq1  TGGGCACCTCTGGTGGCCGCAACAGTGGCAATACCTTCTATTAGACATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACCTCTGGTGGCCGCAACAGTGGCAATACCTTCTATTAGACATAT  444

seq1  TAAAAGATGCCAATTTTAATGGGAAAAAAAAGACTGCTGGTCCATGGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATGCCAATTTTAATGGGAAAAAAAAGACTGCTGGTCCATGGGTG  494

seq1  CCTCTATTTGTGTTTTCACACAGTCCCCTGTTAATGGCTGGAACATTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATTTGTGTTTTCACACAGTCCCCTGTTAATGGCTGGAACATTTTC  544

seq1  TTGTACTCAGGGCCCAAGAACTAGAACTAGAAGATCATCAGAGCAGACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTCAGGGCCCAAGAACTAGAACTAGAAGATCATCAGAGCAGACTG  594

seq1  GAGCAGAAACTACGACAGAAAATGCTCAAGGATGGTGAGTATGGGGTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAAACTACGACAGAAAATGCTCAAGGATGGTGAGTATGGGGTACA  644

seq1  TTTGGGGCCCCTGCTGAAGACACACACCTCACAATTGAGCAAGTCATGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGCCCCTGCTGAAGACACACACCTCACAATTGAGCAAGTCATGCT  694

seq1  ACAGATAGGAATGAAGAACCCATCCTAGCTTGCACAGCCCCCAGCCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATAGGAATGAAGAACCCATCCTAGCTTGCACAGCCCCCAGCCTGAG  744

seq1  GTGAACTCAAAGCACCTCCCCTCTCACATTCAAAGTCTCTCTCTGTAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTCAAAGCACCTCCCCTCTCACATTCAAAGTCTCTCTCTGTAGCT  794

seq1  GTCCTCAGCCTCCCAAGTACTGAGATAATAAGTGTGTACCACCATACCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAGCCTCCCAAGTACTGAGATAATAAGTGTGTACCACCATACCCA  844

seq1  GCTCAGACTATATCTTCCTTTTTTTAAAAAAAATTACGTTTTTTGCTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGACTATATCTTCCTTTTTTTAAAAAAAATTACGTTTTTTGCTTAT  894

seq1  TTATTCATGGGGGTAGGGACCATGCATGCTCTAGCACATTGGTGGAATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATGGGGGTAGGGACCATGCATGCTCTAGCACATTGGTGGAATTC  944

seq1: chr7_119392553_119392699
seq2: B6Ng01-165E22.g_72_218

seq1  CACTTTGAAAACATCTTAAGACCTGTGCCTGCCTTTGTTGGCACTCATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGAAAACATCTTAAGACCTGTGCCTGCCTTTGTTGGCACTCATTC  50

seq1  AGGGCCCTGAGCTGAAGGGACACAGGGGAAATGGCTTAGCCTCTCCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCTGAGCTGAAGGGACACAGGGGAAATGGCTTAGCCTCTCCAGGA  100

seq1  ACATTCAGGACTCACAAGAACTAGGTTTTGTTGGGGGGGGGGGAGTG  147
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAGGACTCACAAGAACTAGGTTTTGTTGGGGGGGGGGGAGTG  147