BAC Information

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BAC

Clone NameB6Ng01-165I16
Chromosome7 (Build37)7 (Build37)
Map Location 22,045,358 - 22,046,81422,469,118 - 22,469,631
singlet/doubletsingletsinglet
Overlap geneLOC670764
Upstream geneLOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588
Downstream geneEG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165I16.bB6Ng01-165I16.g
ACCDH957574DH957575
length1,079510
definitionDH957574|Mus musculus domesticus DNA, BAC clone: B6Ng01-165I16, 5' end.DH957575|Mus musculus domesticus DNA, BAC clone: B6Ng01-165I16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(22,045,358 - 22,046,814)(22,469,118 - 22,469,631)
sequence
gaattctaatttacatttgagttcagttggaggagttttgggagcaaaag
cactcatgttgtttggaaatatagtgaggaatagagtcaaggcattggcc
acagccatgtggcttaaaatcacctgtctgggcctctgtttagaaccagt
caagactggagagaaattatggacaaacagaaagacattggccacggtcc
caatcccaaactggcaaagcaaaaggatctgaagagccacttcctcagtg
gttttcacggatttaccatgagcagacatggagaggcctttattcaaccc
tggagtaatgattaggtaggacactactctcctcgggtctctgttttatt
gtccacacttaccaattgatttgagacaatttcttcacttgataagtgag
acactattctattacattacaggcaaattgcctgaaaaacaatgaatgta
taaaaactcaaataaaattttatactgattttatttctcctgcctcaatg
taaattttgtattgcaactacatctgtattggtccagtaggtcaagagca
caataacacacattttgccacaccaaggtctttgcatatgaatacagaca
gtaaagagtctactatgagtctgtgattccatcatcagaattcaatacaa
ttaggagggaggaaacgcttcaattgggatgtagctaaatcaataaaaaa
taaaagaatatataaatgcaacataaaaataattaactgaatttccttat
gttatagtaacatattaaaaatagtatgtatgggaacaatataatattgc
acacaataatgaaattgtgtaaccgaattcagtggtaggaaattgagttg
ttggcttttgagaaattttatactactcatcctaaaaatttttaaaacac
caaatatttctgataaagccacctgtgttgtaatcacacagatgaacata
ggcttacatatgtgtcctccatacgaaaaaaaaaacacttgctaacaagt
ttcaatttattcataattttactgatcataatttttgttctaaaatgggg
aggggccagaagtctttacctgcatcatc
aaggccaatacctaaacatgataaaagcaatctacaccaatttaggattt
ttatgggattcctgagtctgtgaatgagtgtgtctcttatttttatgcct
tcttttgggtacttttcattattattattattattattattattattatt
attattattattattattttggtgtgtgccaccatgcctggctcaggaat
ggggtgggtttttttgtttttttggtttttcaagacagggtttctctgtg
tagccctggctgtcctggaactcactttgtagaccaggctggtctcgaac
tcagaaatccatctgcctctgcctcccaagtgctgggattaaaggcgttg
gccaccacgcccggcttccttatctttgtttatcttgtccaactccaata
tgataggtttttattttaatcatattacatttcatgttgtcatatcttac
tattacctcttagaagtctgtggattcaggtggaggaggaaggagggaga
gaatgggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_22045358_22046814
seq2: B6Ng01-165I16.b_42_1120

seq1  GAATTCTAATTTACATTTGAGTTCAGTTGGAGGAGTTTTGGGACCAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAATTCTAATTTACATTTGAGTTCAGTTGGAGGAGTTTTGGGAGCAAAAG  50

seq1  CCATCATGTTGTTTGGAAATGTAGTGAGGAATAGAGTCAAGGCATTGGCC  100
      |  ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CACTCATGTTGTTTGGAAATATAGTGAGGAATAGAGTCAAGGCATTGGCC  100

seq1  ACAGCCATGTGGCTTAAAATCACCTGTCTGGGTCTCTGTTTAGAACCAGT  150
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACAGCCATGTGGCTTAAAATCACCTGTCTGGGCCTCTGTTTAGAACCAGT  150

seq1  CAAGACTGGAGAGAAATTATGGACAAACAGAAAGACATTGGCCAGGGTCC  200
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAAGACTGGAGAGAAATTATGGACAAACAGAAAGACATTGGCCACGGTCC  200

seq1  CAACCCCAAACTGGCAAAGCAAGAGGATCTGAAGAGCCACTTCCTCAGTG  250
      ||| |||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAATCCCAAACTGGCAAAGCAAAAGGATCTGAAGAGCCACTTCCTCAGTG  250

seq1  GTTTTCACGGATTTACCATGAACAGACATGGAGAGGCCTTTATTCAACCC  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTTTTCACGGATTTACCATGAGCAGACATGGAGAGGCCTTTATTCAACCC  300

seq1  TGGAGTGATGATTAGGTAGGACACTACTCTCCTCGGGTCTCTGTTTTATT  350
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTAATGATTAGGTAGGACACTACTCTCCTCGGGTCTCTGTTTTATT  350

seq1  GTCCACACTTACCAATTGATTTGTGACAATTTCTTCACTTGATAAGTGAG  400
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTCCACACTTACCAATTGATTTGAGACAATTTCTTCACTTGATAAGTGAG  400

seq1  ACACTATTCTATCACATTACAGGCAAATTGCCTGAAAAACAATGAATGTA  450
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACACTATTCTATTACATTACAGGCAAATTGCCTGAAAAACAATGAATGTA  450

seq1  TAAAAACTCAAATAAAATTTTATACTGATTTTATTACTCCTGCCTCCATG  500
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  TAAAAACTCAAATAAAATTTTATACTGATTTTATTTCTCCTGCCTCAATG  500

seq1  TAAATTTTGTATTGCAACTACATCTTTATTGGTCCAGTAGGTCAATGTGG  550
      ||||||||||||||||||||||||| ||||||||||||            
seq2  TAAATTTTGTATTGCAACTACATCTGTATTGGTCCAGT------------  538

seq1  GGAGCGGGTGTGGCGGCAGTCCTAAAGGCGCCAGGGACTGCAGCTAAGTC  600
                                                        
seq2  --------------------------------------------------  538

seq1  ATATGACTTGCACCTGACTTCCTCATATAAGACACAAACATCTTGAGTGC  650
                                                        
seq2  --------------------------------------------------  538

seq1  TGCGCAGGTGTACCAGGATACAGGTGAATCCAATTTGGTGGAGATTTGCC  700
                                                        
seq2  --------------------------------------------------  538

seq1  CCTGCTGCCCTGATTAGCTGAAGCCTTGTGACTGGCGAGGGGGCATGGCC  750
                                                        
seq2  --------------------------------------------------  538

seq1  TGCAGTGCGTGGATGAGAGAGAGTATAAAAAGAGTGAGAGGCCCAGGGTT  800
                                                        
seq2  --------------------------------------------------  538

seq1  CGGGGGAGATATAAACAAGGGAAATATAGAGAAAGAAGAAACAGGACTGA  850
                                                        
seq2  --------------------------------------------------  538

seq1  ATAAACGTGTGCAGAAGGATCCTGTAGCAGCGTCGTTCTTCCTGGCCTGT  900
                                                        
seq2  --------------------------------------------------  538

seq1  TGAGCGCGCGCAAGAGGTCAAGAGCACAATAACACACATTTTAACACACC  950
                    ||||||||||||||||||||||||||||  ||||||
seq2  --------------AGGTCAAGAGCACAATAACACACATTTTGCCACACC  574

seq1  AAGGTCTTTGCATATGAATACAGACAGTAAAGAGTCTACTATGAGTCTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTTTGCATATGAATACAGACAGTAAAGAGTCTACTATGAGTCTGT  624

seq1  GATTCCATCATCAGAATTCAATACAATTAGGAGGGAGGAAAGGCTTCAAT  1050
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GATTCCATCATCAGAATTCAATACAATTAGGAGGGAGGAAACGCTTCAAT  674

seq1  TGGGATGTAACTAAATCAATAACAAATAAAAGAATATATAAATGCAATGT  1100
      ||||||||| |||||||||||| ||||||||||||||||||||||||  |
seq2  TGGGATGTAGCTAAATCAATAAAAAATAAAAGAATATATAAATGCAACAT  724

seq1  AAAAATAATTAATTGAATTT-CTTATGTTATAGTAACATATTAAAAATAG  1149
      |||||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  AAAAATAATTAACTGAATTTCCTTATGTTATAGTAACATATTAAAAATAG  774

seq1  TATGTATGGGAACAATATAATATTGCACTCAATAATAAAGTTATGTAACT  1199
      |||||||||||||||||||||||||||| ||||||| || || |||||| 
seq2  TATGTATGGGAACAATATAATATTGCACACAATAATGAAATTGTGTAACC  824

seq1  GAATTCAGTTGTAGAAAATTAAGTTGTTGGCTTTTGAGAAAATTTCATAC  1249
      ||||||||| |||| ||||| ||||||||||||||||| |||||| ||||
seq2  GAATTCAGTGGTAGGAAATTGAGTTGTTGGCTTTTGAG-AAATTTTATAC  873

seq1  TACTTATCCTCTAAATTAAAAAAAAAAACCACCAAATACTTCTGATAAAG  1299
      |||| |||||  |||||   ||||     ||||||||| |||||||||||
seq2  TACTCATCCTAAAAATTTTTAAAA-----CACCAAATATTTCTGATAAAG  918

seq1  CCACCTGTGTTGTAATCACACACATGAACATAGGCTAACATATGTGTTCT  1349
      |||||||||||||||||||||| ||||||||||||| |||||||||| ||
seq2  CCACCTGTGTTGTAATCACACAGATGAACATAGGCTTACATATGTGTCCT  968

seq1  CCATACGAAAAAAAAAAAACACTTGCTAACAAGTTTC-ATTTATTCATAA  1398
      |||||||  |||||||||||||||||||||||||||| ||||||||||||
seq2  CCATACG--AAAAAAAAAACACTTGCTAACAAGTTTCAATTTATTCATAA  1016

seq1  TTTTACTGATCATAATTTTTGTTCTAAA--TGTGAGGTGCCAG-AGTC-T  1444
      ||||||||||||||||||||||||||||   | |||| ||||| |||| |
seq2  TTTTACTGATCATAATTTTTGTTCTAAAATGGGGAGGGGCCAGAAGTCTT  1066

seq1  TACCTGCATCATC  1457
      |||||||||||||
seq2  TACCTGCATCATC  1079

seq1: chr7_22469118_22469631
seq2: B6Ng01-165I16.g_114_587

seq1  CCAATTAAGGATTTTTATGAGATTCCTGAGTCTGTGAATGAGTGTGTCTC  50
      |||||| |||||||||||| ||||||||||||||||||||||||||||||
seq2  CCAATTTAGGATTTTTATGGGATTCCTGAGTCTGTGAATGAGTGTGTCTC  50

seq1  TTATTTTTATGCCTTCTTTTGGGTACTTTTC------ATTATTATTATTA  94
      |||||||||||||||||||||||||||||||      |||||||||||||
seq2  TTATTTTTATGCCTTCTTTTGGGTACTTTTCATTATTATTATTATTATTA  100

seq1  TTATTATTATTATTATTATTATTATTATTATTTTGGTGTGTGCCACCACT  144
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  TTATTATTATTATTATTATTATTATTATTATTTTGGTGTGTGCCACCATG  150

seq1  CCTGGCTCAGGAATGGGGTGGGGTTTTTTGGTTTTTTTTTTGTTTTTTGT  194
      ||||||||||||||||||||||                            
seq2  CCTGGCTCAGGAATGGGGTGGG----------------------------  172

seq1  TTTTTTGTTTTGTTTTTTTTTTTTTTTTTTTTTGGTTTTTCAAGACAGGG  244
                        ||||||| ||||||||||||||||||||||||
seq2  ------------------TTTTTTTGTTTTTTTGGTTTTTCAAGACAGGG  204

seq1  TTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTCACTTTGTAGACCAGGCT  294
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCT  254

seq1  GGTCTCGAACTCAGAAATCCATCTGCCTCTGCCTCCCAAGTGCTGCGATT  344
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGTCTCGAACTCAGAAATCCATCTGCCTCTGCCTCCCAAGTGCTGGGATT  304

seq1  AAAGGTGTTGGCCACCACGCCCGGCTTCCTTATCTTTGTTTATCTTGTCC  394
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCGTTGGCCACCACGCCCGGCTTCCTTATCTTTGTTTATCTTGTCC  354

seq1  AACTCCAATATGATAGGTTTTTATTTTAATCATATTACATTTCATGTTGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCAATATGATAGGTTTTTATTTTAATCATATTACATTTCATGTTGT  404

seq1  CATATCTTACTATTACCTCTTAGAAGTCTGTGGATTCAGGTGGAGGAGGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTTACTATTACCTCTTAGAAGTCTGTGGATTCAGGTGGAGGAGGA  454

seq1  GGGAGGGAGAGAATGGGAGG  514
       ||||||||||||||||| |
seq2  AGGAGGGAGAGAATGGGATG  474