BAC Information

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BAC

Clone NameB6Ng01-165M13
Chromosome7 (Build37)
Map Location 46,514,346 - 46,574,040
singlet/doubletdoublet
Overlap geneLOC100038914, EG668531, EG628058
Upstream geneLOC100038955, LOC100038967, LOC620018
Downstream geneEG668618, EG330513, EG434168, 9430025M13Rik, LOC100038985, 3000002G13Rik, EG215208, LOC100039133, LOC100039050, EG668540, 4930558N11Rik, EG628161
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165M13.bB6Ng01-165M13.g
ACCDH957751DH957752
length1,152828
definitionDH957751|Mus musculus domesticus DNA, BAC clone: B6Ng01-165M13, 5' end.DH957752|Mus musculus domesticus DNA, BAC clone: B6Ng01-165M13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,572,884 - 46,574,040)(46,514,346 - 46,515,075)
sequence
gaattctacagaggaattctacaagaaggaagaaggtacaggaactgtca
cactcctttcaggtggggataaagagagaaggcagccagcctgggtagct
cacaaccttgatactaaaaacagggagacaaacacaacaagaatgtccat
tgagtctgagggcagacagtgatatacagagagatccagaacatgagcta
gataggaaatcctaacacaggaaaacaaaagaagaggagagaaaaatact
cagaaatagcagaatatgggcagaagagcacgaaagtctgaataagggaa
cacatgcagccagcctttcctttggctcctctgttctttacttataaggg
cagaacccactttacaagcatttgccagatgaaatgaagaccactgcttc
tggaagttcagtgctatcacccactaatgtaagaatgcaggatcaagctg
gtccaaggatcaaagcctacagaggagagaagagaggtttgaggttaacc
agggtcagaacaactgaagaaaggactcctggagaagaaactgaagcatt
cataatctccaaaaccgtgcccttcaacacagttaaaatggtgctcttga
tctcttcctttggtcatagacagatgctaacagctcacaactcagatcaa
ctgaaaaggtttctcacctaattgccccaacctatatgctcctctccttg
ctgctgtagggttctgtctgagtatacaatgggcactgaagggatataat
cttttggaatattttacatcatatgtccattagaaagatcttcatcaatg
aaccttatcaaaagcactgccataaactcagaggctaaaagtcatgtcaa
gaggggctgccatgccaagattaactctttgatcagcacacaactcacgc
ttcatggatgaagctggtcttctggcatgcatcttctccacccaatctgt
cttggagctccagaacatgacctttccaattggctactgctgatttatga
catcattcttccctcccagcctaccagcactagtagaatactcgggggtt
tcatggagctgcctgttaacaaattggatcatcacaggcaaccatgaaca
gtgacatgagctgtctgaatactgaacaactctctgtttgtcagcagatc
ag
gaattctgcatggctagggataggtgttgttaatggcccgtccccatcaa
cagatggtgtcttcctctgggaaactgggttgcaagtgatgtagaattct
ggactctgcagcaggcaaaatgtttggcttgaaggtgacaatcccaggga
tgtatccagttccaccactacaaaagagtcaaggaagaagtcagtataag
gtaaataagattttctccttttgtagcactagaggaaaattggtaccagc
atagtggggtatccctgtgacaatctgaccgttttgtggaaggactttgg
aattttgggctaaaagatccatttggtgttaaatgctctgtgggatgttg
tgtaggagcttggaagacacttttgagaacaatgcagaagatggaggcct
gacttgtgaaatttcagttttgattagctggggctgaagaatcagctgtg
atgaacaagataccagaaccactaatgtgaatctttgtgttactgggact
attgatgctggttagctggagctaagaaattatcagtgattaaaaggaga
ccaacattgttgaggtgaaatcttctaggaagatacctaaggacatacct
tgagttatagctggacttggtaatgtgtaagagtcaccctggtggtactg
gtgttgaaggcattaagagcatctgagtctacagaaggccatttgatgaa
ggtgcagtctcagttgcaattgatggccaagaactgaaggaatcatgcaa
aggaattgaggtttgccaccatgaagagagcctatgagaagctatttatg
aggactagttgcagtggaagacagcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_46572884_46574040
seq2: B6Ng01-165M13.b_46_1197 (reverse)

seq1  CTGATCTGCTGACCAAACCAGAGAGAGTGTTCAGTA-TCAGACAGCTCAC  49
      |||||||||||||  || |||||||  ||||||||| |||||||||||| 
seq2  CTGATCTGCTGAC--AAACAGAGAG-TTGTTCAGTATTCAGACAGCTCA-  46

seq1  TGGTCACTGGTCACAGGTTACCTGTGATGATCCAAATTTGTTTACAGGCA  99
        ||||||| |||  |||| ||||||||||||| |||||||| |||||||
seq2  -TGTCACTGTTCA-TGGTTGCCTGTGATGATCC-AATTTGTTAACAGGCA  93

seq1  GCTCCATGGAAACCCC-AGGATTCTACTAGGTGCTGGTAGGCTGGGAGGG  148
      |||||||| || |||| || ||||||||| ||||||||||||||||||||
seq2  GCTCCATGAAACCCCCGAGTATTCTACTA-GTGCTGGTAGGCTGGGAGGG  142

seq1  -AGAATGATGTCATAAATCAAGCAGTAGCCAATTGG-AAGGTCATATTCT  196
       |||||||||||||||||| |||||||||||||||| |||||||| ||||
seq2  AAGAATGATGTCATAAATC-AGCAGTAGCCAATTGGAAAGGTCATGTTCT  191

seq1  -GAGCTCCAAGACAGGATTGGGTGGAGAAGATGCATGCCAGAAGATCAGC  245
       ||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  GGAGCTCCAAGACA-GATTGGGTGGAGAAGATGCATGCCAGAAGACCAGC  240

seq1  TTCATCCATGAAGCCTGAGTTGTGTGCTGATCAAAGAGTTAATCTTGGCA  295
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCATCCATGAAGCGTGAGTTGTGTGCTGATCAAAGAGTTAATCTTGGCA  290

seq1  TGGCAACCCCTCTTGACATGACTTTTAGCCTCTGAGATTATGGTAGTGCT  345
      ||||| |||||||||||||||||||||||||||||| |||||| ||||||
seq2  TGGCAGCCCCTCTTGACATGACTTTTAGCCTCTGAGTTTATGGCAGTGCT  340

seq1  TTTGATAAGGCTCATTGATGAAGGTCTTTCTAATGTACATATGATATAAA  395
      |||||||||| |||||||||||| ||||||||||| ||||||||| ||||
seq2  TTTGATAAGGTTCATTGATGAAGATCTTTCTAATGGACATATGATGTAAA  390

seq1  ACATTCCAAAAGATTTTATCCCTTCAGTGGCCATTGTATACTCAGACAGA  445
      | ||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  ATATTCCAAAAGATTATATCCCTTCAGTGCCCATTGTATACTCAGACAGA  440

seq1  ACCCTTCAGCAGGAAGGAGAGGAGCATATAGGTTGGGGCAACTTAGTTGA  495
      ||||| |||||| |||||||||||||||||||||||||||| |||| |||
seq2  ACCCTACAGCAGCAAGGAGAGGAGCATATAGGTTGGGGCAA-TTAGGTGA  489

seq1  GAAACCATTTCAGTTAATCTGAGTTGTGAGCTGTTAGCATCTCTCTGTGA  545
      |||||| |||||||| |||||||||||||||||||||||||| ||| |||
seq2  GAAACCTTTTCAGTTGATCTGAGTTGTGAGCTGTTAGCATCTGTCTATGA  539

seq1  CCAAAGGAAGAGATCAAGAGCTCCATTTTAGCTGTGTTGAAGGGCAGGGT  595
      ||||||||||||||||||||| |||||||| ||||||||||||||| |||
seq2  CCAAAGGAAGAGATCAAGAGCACCATTTTAACTGTGTTGAAGGGCACGGT  589

seq1  TGTAGAGATTATGAATGCTTCAGTTTCTTCTCCAGGAGTCCTTTCTTCAG  645
      | | ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGATTATGAATGCTTCAGTTTCTTCTCCAGGAGTCCTTTCTTCAG  639

seq1  TTGTTCTGACCCTGGTTGACCTCACATCTCTCTTCTCTCCTCTGTAGGCT  695
      ||||||||||||||||| |||||| | |||||||||||||||||||||||
seq2  TTGTTCTGACCCTGGTTAACCTCAAACCTCTCTTCTCTCCTCTGTAGGCT  689

seq1  TTGATCCTTGGACCAGCTTGATCCTGCATTCTTACATTAGTGGGTGATAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCCTTGGACCAGCTTGATCCTGCATTCTTACATTAGTGGGTGATAG  739

seq1  CACTGAACTTCCAGAAGCAGTGGTCTTCATTTCATCTGACAAATGCTTGT  795
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CACTGAACTTCCAGAAGCAGTGGTCTTCATTTCATCTGGCAAATGCTTGT  789

seq1  AAAGTGGGTTCTGCCCTTATAAGTAAAGAACAGAGGAGCCAAAGGTAAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAAGTGGGTTCTGCCCTTATAAGTAAAGAACAGAGGAGCCAAAGGAAAGG  839

seq1  CTGGCTGCATGTGTTCCCTTATTCAGACTTTCGTGCTCTTCTGCCCATTT  895
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTGGCTGCATGTGTTCCCTTATTCAGACTTTCGTGCTCTTCTGCCCATAT  889

seq1  TCTGCTATTTCTGGGTATTTTTCTCTCCTCTTCTTTTGTTTTCCCAAGTT  945
      ||||||||||||| ||||||||||||||||||||||||||||||   |||
seq2  TCTGCTATTTCTGAGTATTTTTCTCTCCTCTTCTTTTGTTTTCCTGTGTT  939

seq1  AGGATTTCCTCTCTAGCTCATGTTCTGGATCTCTCTGTACATCACTGTCT  995
      |||||||||| |||||||||||||||||||||||||||| ||||||||||
seq2  AGGATTTCCTATCTAGCTCATGTTCTGGATCTCTCTGTATATCACTGTCT  989

seq1  GCCCTCAGACTCAATGGACATTCTTGTTGTCTTTGTCTCCCTGTTTTTGG  1045
      |||||||||||||||||||||||||||||| ||||||||||||||||| |
seq2  GCCCTCAGACTCAATGGACATTCTTGTTGTGTTTGTCTCCCTGTTTTTAG  1039

seq1  TATCATGGTTGTGAGCTACCCAAGCTGGCTGCCTTCTCTCTTTGTCCCCA  1095
      ||||| |||||||||||||||| |||||||||||||||||||| ||||||
seq2  TATCAAGGTTGTGAGCTACCCAGGCTGGCTGCCTTCTCTCTTTATCCCCA  1089

seq1  CCTGAAAGGAGTGTGACAGTTCCTGTACCTTCTTCCTTCTTGTA-ACAGC  1144
      |||||||||||||||||||||||||||||||||||||||||||| |   |
seq2  CCTGAAAGGAGTGTGACAGTTCCTGTACCTTCTTCCTTCTTGTAGAATTC  1139

seq1  CTGTGTAGAATTC  1157
      || ||||||||||
seq2  CTCTGTAGAATTC  1152

seq1: chr7_46514346_46515075
seq2: B6Ng01-165M13.g_72_802

seq1  GAATTCTGCATGGCTACGGATAGGGGTTGTTAATGGCCCGTCCCCATCAA  50
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  GAATTCTGCATGGCTAGGGATAGGTGTTGTTAATGGCCCGTCCCCATCAA  50

seq1  CAGATGGTGTCTTCCTCTGGGAAACTGTGGTGCAAGTGATGTATAATTCT  100
      ||||||||||||||||||||||||||| | ||||||||||||| ||||||
seq2  CAGATGGTGTCTTCCTCTGGGAAACTGGGTTGCAAGTGATGTAGAATTCT  100

seq1  GGACTCTGTAGCAGAGAAAGTGTTTGGCCTGAAGGCGACAATCCCAGGGA  150
      |||||||| |||||  ||| |||||||| |||||| ||||||||||||||
seq2  GGACTCTGCAGCAGGCAAAATGTTTGGCTTGAAGGTGACAATCCCAGGGA  150

seq1  TGTATCCAGTTCCACCACTGCAAAAGAGTCAAGGAAGAAGTCAGTACACA  200
      ||||||||||||||||||| |||||||||||||||||||||||||| |  
seq2  TGTATCCAGTTCCACCACTACAAAAGAGTCAAGGAAGAAGTCAGTATAAG  200

seq1  GTAAATAAGATTTTCTCCTTTTGTAGCACTACAGGGAAATTGGTACCAGC  250
      ||||||||||||||||||||||||||||||| ||| ||||||||||||||
seq2  GTAAATAAGATTTTCTCCTTTTGTAGCACTAGAGGAAAATTGGTACCAGC  250

seq1  ATAGTGGGGTATCCCTGTGATAATCTGACCTTGTTTGTGAAAGGACTTTG  300
      |||||||||||||||||||| ||||||||| | |||||| ||||||||||
seq2  ATAGTGGGGTATCCCTGTGACAATCTGACCGT-TTTGTGGAAGGACTTTG  299

seq1  GAACTTTGGGCTAAAAGATCCATTCGGTGTTAAATGCTCTGTGGGATGTT  350
      ||| |||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAATTTTGGGCTAAAAGATCCATTTGGTGTTAAATGCTCTGTGGGATGTT  349

seq1  GTGTAGGAGCTTGGAAGACATGGTTGAGATCAATGCAGAAGATGGAGGCC  400
      ||||||||||||||||||||   |||||| ||||||||||||||||||||
seq2  GTGTAGGAGCTTGGAAGACACTTTTGAGAACAATGCAGAAGATGGAGGCC  399

seq1  TGACTTGTGAAATTTCAGTTTTGATTAGCTGGGGCTGAAGAATCAGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGTGAAATTTCAGTTTTGATTAGCTGGGGCTGAAGAATCAGCTGT  449

seq1  GATGAACAAGATACCAGAACCACTAAAGTGAATCTTTGTGTTAGTGGGAC  500
      |||||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  GATGAACAAGATACCAGAACCACTAATGTGAATCTTTGTGTTACTGGGAC  499

seq1  TATTGATGCTGGTTAGCTGGAGCTAAGAAATTATCGGTGATTAAAAGGAG  550
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATTGATGCTGGTTAGCTGGAGCTAAGAAATTATCAGTGATTAAAAGGAG  549

seq1  ACCAACATTG-TGAGGTGAAATCTTCTAGGAAGATAGGCAAGTTTGTACC  599
      |||||||||| |||||||||||||||||||||||||   |||    ||||
seq2  ACCAACATTGTTGAGGTGAAATCTTCTAGGAAGATACCTAAGGACATACC  599

seq1  TTGTGTTGTAGCTGGACTTGGTAATGTGTAAGAGTCACCCAGGTGGTACT  649
      ||| ||| |||||||||||||||||||||||||||||||| |||||||||
seq2  TTGAGTTATAGCTGGACTTGGTAATGTGTAAGAGTCACCCTGGTGGTACT  649

seq1  GGTGTTGAAGGCATTAAGAGCATTTGAGGCTACAGAAGGCCA-TTGGTGA  698
      ||||||||||||||||||||||| |||| ||||||||||||| ||| |||
seq2  GGTGTTGAAGGCATTAAGAGCATCTGAGTCTACAGAAGGCCATTTGATGA  699

seq1  AAGTGCAGCCTCAGTTGCAATTGATGGCCAAG  730
      | |||||| |||||||||||||||||||||||
seq2  AGGTGCAGTCTCAGTTGCAATTGATGGCCAAG  731