BAC Information

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BAC

Clone NameB6Ng01-165N24
Chromosome7 (Build37)
Map Location 94,546,588 - 94,547,707
singlet/doubletsinglet
Overlap geneNox4
Upstream geneOlfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477
Downstream geneTyr, Grm5, Ctsc, LOC100039756
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165N24.bB6Ng01-165N24.g
ACCDH957814DH957815
length1,1851,130
definitionDH957814|Mus musculus domesticus DNA, BAC clone: B6Ng01-165N24, 5' end.DH957815|Mus musculus domesticus DNA, BAC clone: B6Ng01-165N24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaactctaacaacaaaattaacaagaagcaacagtgaattttcc
ttaatgtctcttaatatcaatggactcagttccccaataaaaagacatag
actaacaggctcattatgtaaacaggacccaactttttgctgcatacagg
aaacccacctcagggacaaagagagacactactttagagtaaaaggatgg
aaaataatttttccaggaaaatggtcccaagaaacatgctggagtctcca
ttctaatattgaataaaatcgactttcaacctaaagttctgaaaaagata
aaaaggaacacttcttactcagcaaaggaaaaatttaccaagataaactc
taaattctgaacatctatgctgtaaattcaaggacatccacattcattaa
agaaactttgttaaaactcaaagtacacattacacctcacacaataatag
tgggagacttcaacacaccaatctcatcaatcaacagatcctggaaacag
aaactaaacagatacatagtgaaactaacagaagttatgaaataaatgga
tttaacagatatctataaaacgcttcatcctaaaacaaaaggatatacct
tctcagcatctcatggtactttctccaaaactgagcatataatcggtcac
aaaacaggcctcaacagatacaaaaatattgaaataatttcatgtaccct
atcagatcaccactgactaaggctgatcttcaataataacataaataata
gaaagtacatggaagctgaacaaaactctactcaatgataacttgatcat
gaagaaataaagatattaaagactttttagagtttaatgaaaatgaagcc
acaacattcccaaacttatgggacacaatgaaagtattcctaagaggaaa
cctcaaagctctgagtgcctccaaaagaaccggagagatcatacactagc
agcttgacagcacacctaaagctctagaaaaaaaagagtaaattcaccca
ggggagtagactgcagaaataatcaaactcaggctgaaatcacaagtgta
aacaaaagactatacaaaaatattcacatcaattttcttgagaaatcacg
gataattatccactattcgacctatcctgaggtaacggaactgatcttat
aagagatcttgaaatgtaaagaaaggattccatat
gaattcttgtgtcccaaaattacatccagtatgctatatgtcatacaatt
ccattattttctcaaaaagatatattacataagataattaatatttgggt
atgtgtgtatttataattctaaaacttgggaaacaagagacagaaggaaa
caaagtgcaaggctatctttggctacatagcaaatttgagaatgactcat
tcaatatgaggctttgtttcaaaacaattgagaaagtaagtactatttta
tattcctcaccaggctcaaaggcaaaatctaatggccagtgtgagaagta
atttgccgcattcacatgactggactatgacattaacagctgtagaatgc
acattctcaagattattatgccagtgtgtagttaggcagtactccttcaa
ttatttttcttttttcacaaaccaacaaccacctctccttggaattacta
atttatctgtaaacttatagaaattccacagacaccattttaattttaat
atttattaccatcaaaattcgtgatttaagatttatacaacagtaaccac
caccatagaatctaaaaagaaatgaagctgtcttctatatgtgtgataaa
gctttaatttattcctgttcaaaaatataccatgtttaacatatagatcc
ttgaacatgcactggagtttagattaggcaaggaagttcactcaacatag
cacacaagtctgaaatatcatcttgttttgtaagtttgacctgaattttt
gaaatgtgatgaattcacataggcataaaaataagttatgattggtaagg
aatcagtattgcacatcaagcctggacaagcccaagttttttttttatga
ggtttatttttatttttatttttgtagtatgtgttttgtgaaaactcttt
gtaatctagacagcattgctatgatgtcatagtttatgtcttccacagtt
cagttctaacatgagcattgcacattgcccataggagggataggaaagtg
tttcccaaggataaaaaaaaatatatgtgtaactctaatatacaggtggt
ttatttgatgctcaaaagttttaagtatgcctttgtctgttagtactgaa
caccatgaatccaatataacaggatttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94546588_94547707
seq2: B6Ng01-165N24.g_66_1195 (reverse)

seq1  AATAAATCCTGTTATTATTTGGATTTCATGTGATTCAGTACTAACAGACA  50
      |||||||||||||||   ||||| ||||||   |||||||||||||||||
seq2  AATAAATCCTGTTAT--ATTGGA-TTCATGGTGTTCAGTACTAACAGACA  47

seq1  A--GCATAC-TAAAACATTT-AGCATCAAAT-AACCACCTGTATATT-TA  94
      |  |||||| |||||| ||| |||||||||| |||||||||||||||  |
seq2  AAGGCATACTTAAAACTTTTGAGCATCAAATAAACCACCTGTATATTAGA  97

seq1  GTTACACATATA-TTTTTTTTATCCTTGG--AACACTTTCCTATCCCTCC  141
      |||||||||||| ||||||||||||||||  |||||||||||||||||||
seq2  GTTACACATATATTTTTTTTTATCCTTGGGAAACACTTTCCTATCCCTCC  147

seq1  TATGGGCAATGTGCAATGCTCATG-TAG-ACTGAACTGTGG-AGACATAA  188
      |||||||||||||||||||||||| ||| |||||||||||| ||||||||
seq2  TATGGGCAATGTGCAATGCTCATGTTAGAACTGAACTGTGGAAGACATAA  197

seq1  ACTATGACATCATAGCAATGCTGTCTAGATTACAAAGAGTTTTCACAAAA  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGACATCATAGCAATGCTGTCTAGATTACAAAGAGTTTTCACAAAA  247

seq1  CACATACTACAAAAATAAAAATAAAAATAAACCTCAT-AAAAAAAAACTT  287
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CACATACTACAAAAATAAAAATAAAAATAAACCTCATAAAAAAAAAACTT  297

seq1  GGGCTTGTCCAGGCTTGATGTGCAATACTGATTCCTTACCAATCATAACT  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGTCCAGGCTTGATGTGCAATACTGATTCCTTACCAATCATAACT  347

seq1  TATTTTTATGCCTATGTGAATTCATCACATTTCAAAAATTCAGGTCAAAC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATGCCTATGTGAATTCATCACATTTCAAAAATTCAGGTCAAAC  397

seq1  TTACAAAACAAGATGATATTTCAGACTTGTGTGCTATGTTGAGTGAACTT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAACAAGATGATATTTCAGACTTGTGTGCTATGTTGAGTGAACTT  447

seq1  CCTTGCCTAATCTAAACTCCAGTGCATGTTCAAGGATCTATATGTTAAAC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCTAATCTAAACTCCAGTGCATGTTCAAGGATCTATATGTTAAAC  497

seq1  ATGGTATATTTTTGAACAGGAATAAATTAAAGCTTTATCACACATATAGA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATATTTTTGAACAGGAATAAATTAAAGCTTTATCACACATATAGA  547

seq1  AGACAGCTTCATTTCTTTTTAGATTCTATGGTGGTGGTTACTGTTGTATA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTTCATTTCTTTTTAGATTCTATGGTGGTGGTTACTGTTGTATA  597

seq1  AATCTTAAATCACGAATTTTGATGGTAATAAATATTAAAATTAAAATGGT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTAAATCACGAATTTTGATGGTAATAAATATTAAAATTAAAATGGT  647

seq1  GTCTGTGGAATTTCTATAAGTTTACAGATAAATTAGTAATTCCAAGGAGA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGGAATTTCTATAAGTTTACAGATAAATTAGTAATTCCAAGGAGA  697

seq1  GGTGGTTGTTGGTTTGTGAAAAAAGAAAAATAATTGAAGGAGTACTGCCT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTGTTGGTTTGTGAAAAAAGAAAAATAATTGAAGGAGTACTGCCT  747

seq1  AACTACACACTGGCATAATAATCTTGAGAATGTGCATTCTACAGCTGTTA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACACACTGGCATAATAATCTTGAGAATGTGCATTCTACAGCTGTTA  797

seq1  ATGTCATAGTCCAGTCATGTGAATGCGGCAAATTACTTCTCACACTGGCC  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATAGTCCAGTCATGTGAATGCGGCAAATTACTTCTCACACTGGCC  847

seq1  ATTAGATTTTGCCTTTGAGCCTGGTGAGGAATATAAAATAGTACTTACTT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATTTTGCCTTTGAGCCTGGTGAGGAATATAAAATAGTACTTACTT  897

seq1  TCTCAATTGTTTTGAAACAAAGCCTCATATTGAATGAGTCATTCTCAAAT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATTGTTTTGAAACAAAGCCTCATATTGAATGAGTCATTCTCAAAT  947

seq1  TTGCTATGTAGCCAAAGATAGCCTTGCACTTTGTTTCCTTCTGTCTCTTG  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATGTAGCCAAAGATAGCCTTGCACTTTGTTTCCTTCTGTCTCTTG  997

seq1  TTTCCCAAGTTTTAGAATTATAAATACACACATACCCAAATATTAATTAT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAAGTTTTAGAATTATAAATACACACATACCCAAATATTAATTAT  1047

seq1  CTTATGTAATATATCTTTTTGAGAAAATAATGGAATTGTATGACATATAG  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTAATATATCTTTTTGAGAAAATAATGGAATTGTATGACATATAG  1097

seq1  CATACTGGATGTAATTTTGGGACACAAGAATTC  1120
      |||||||||||||||||||||||||||||||||
seq2  CATACTGGATGTAATTTTGGGACACAAGAATTC  1130