BAC Information

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BAC

Clone NameB6Ng01-166K22
Chromosome7 (Build37)
Map Location 86,968,071 - 86,969,166
singlet/doubletsinglet
Overlap geneAnpep
Upstream geneDet1, Isg20l1, Isg20, Acan, Hapln3, Mfge8, Abhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2
Downstream geneAp3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166K22.bB6Ng01-166K22.g
ACCDH958388DH958389
length1,0921,219
definitionDH958388|Mus musculus domesticus DNA, BAC clone: B6Ng01-166K22, 5' end.DH958389|Mus musculus domesticus DNA, BAC clone: B6Ng01-166K22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggccagccagagccacatagtgagaccctgtctcaaaacata
aaataattaaataaaaggcgtagaggggtacaggtaggtgctgatctgct
tgctgcaacagcaaggccctgagttgaagccctagcactgcaaacacatt
ttttaaaaaaaaaaaattgtcctactctgggtggtggtggcgcacgcctt
taatcccagcacttgggaggcagaggcaggaggatttctgagttcgaggc
cagcctggtctacaaagtgagttctaggacagcaagggctatacagagaa
accctgtctcgaaaaagccacacacacacacacacacacacacacacaca
cacacaaattgtcctacatgtacaaaaatatcaataaaactctttaaaac
acacaggtataggagctggagagatggctcagcagttaagagcaatgact
gctcttctagaggtcctgagttcaattcccagcaatcacatggtagctca
caaccatctgtaatgggatctgatgacttcttctggtgtgtctgaagaca
gctacagtgtactcatatacataaattaaataaatttttaaaaaacattt
aaaaaacccacaggtataaaactacatgatacccaagtgtaagcaaggga
aaataacacatttttctgcaagtgggaagcagaggcaggacgattactga
atgagaagaaaatgtttgcaggtcatgcatctatctcaaaacacacacac
accttcgcacaaccttcatacaacacacaacttcgcacaactttcttaca
acacacgccttcacacaaccttcttacaacacacgccttcacacaaccca
gcgacggaaaggcagaagctcaatttaaaccagggaaaagacgtgaatag
aagttattctagcgatatgcaaacagccagcaagctcctgcccttagtca
tccatacactgcccaagaccctgagaaactgggaactgggcctcactgaa
agcagaatgtgcagtagtgcattgcttcggggtaatgaaaacttatgtcc
tgatcctcccagccctatgggtcagatgaagagactcagact
gaattccaggacagccagggctatacagagaaaccctgtctcgaaacaaa
acaaaacaaaacaaaacaaaacaaaacaaaaccccccaaaaaaagaaaga
aagaaagaaaggaaggaaggaaggaaggaaggaagaaagaaagggaaagg
aaaggaaaggaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaaga
aaaattgaatatatttatggtgaccaacctgatgtttagacatatgcttg
tatctcagagtggctaaatcaagctgattaccatttgtgtgagaacatta
ggacctgcccttagcagtttacaagaacacagcactcagttgtgacacag
tcacagtgttgctctcttgacccttgaattcctgcctccatctcactgat
agtctctaccctgtggctgttatctctccaatgcattcccacccctggct
actctagcccttggaaaccattttattctatgtttctttgaggtagacat
ttttattacttttaagttagcttatgcaacattgtcttactatgcccgat
tcatttcacttaaggcaatatcttccaggttcacccaagctgctgcaagg
gtgagctctcctctctctccttttttattttttaatttttaatttttttt
acaagggtctcacattgcccagcgtggcctccaactttccatgtagcaaa
gaatggccttaaacttctgatccttctgcctctactcacaagcactgggc
aagggcagtactaaatgacccatagagccagccctagttgtcttttatta
attcatttaaaaatgtgtttgtatatatgtttatgggtatgtctgtgtgc
atgtgtgtaggcaagaggctgctgtgggctgtattcttctattgctctcc
acctgttttttttacattaattaattataattaattaactaattaattaa
tgtgtgtgtgtgtgtgtctgtctgtctgtctgtctagtagggttttattg
ctatgaagagaaaccatgactaagcaactctttataaagaaaaactttag
ttcgggctggctaagtcaagagtttaagtccatttatcgtcatgcagaaa
catgtgcatgcagtagaatatgtactggagaggtagactgaagttctctg
ctcggatcgagttacacaccctttggatgatccactcaaggtctttcatt
tagaagcgcctgaagcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86968071_86969166
seq2: B6Ng01-166K22.b_45_1136

seq1  GAATTCCAGGCCAGCCAGAGCCACATAGTGAGACCCTGTCTCAAAACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAGCCAGAGCCACATAGTGAGACCCTGTCTCAAAACATA  50

seq1  AAATAATTAAATAAAAGGCGTAGAGGGGTACAGGTAGGTGCTGATCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTAAATAAAAGGCGTAGAGGGGTACAGGTAGGTGCTGATCTGCT  100

seq1  TGCTGCAACAGCAAGGCCCTGAGTTGAAGCCCTAGCACTGCAAACACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAACAGCAAGGCCCTGAGTTGAAGCCCTAGCACTGCAAACACATT  150

seq1  TTTTAAAAAAAAAAAATTGTCCTACTCTGGGTGGTGGTGGCGCACGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAAAAAAAATTGTCCTACTCTGGGTGGTGGTGGCGCACGCCTT  200

seq1  TAATCCCAGCACTTGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGCACTTGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGC  250

seq1  CAGCCTGGTCTACAAAGTGAGTTCTAGGACAGCAAGGGCTATACAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGTCTACAAAGTGAGTTCTAGGACAGCAAGGGCTATACAGAGAA  300

seq1  ACCCTGTCTCGAAAAAGCCACACACACACACACACACACACACACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTCGAAAAAGCCACACACACACACACACACACACACACACACA  350

seq1  CACACAAATTGTCCTACATGTACAAAAATATCAATAAAACTCTTTAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAATTGTCCTACATGTACAAAAATATCAATAAAACTCTTTAAAAC  400

seq1  ACACAGGTATAGGAGCTGGAGAGATGGCTCAGCAGTTAAGAGCAATGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTATAGGAGCTGGAGAGATGGCTCAGCAGTTAAGAGCAATGACT  450

seq1  GCTCTTCTAGAGGTCCTGAGTTCAATTCCCAGCAATCACATGGTAGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCTAGAGGTCCTGAGTTCAATTCCCAGCAATCACATGGTAGCTCA  500

seq1  CAACCATCTGTAATGGGATCTGATGACTTCTTCTGGTGTGTCTGAAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATCTGTAATGGGATCTGATGACTTCTTCTGGTGTGTCTGAAGACA  550

seq1  GCTACAGTGTACTCATATACATAAATTAAATAAATTTTTAAAAAACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGTGTACTCATATACATAAATTAAATAAATTTTTAAAAAACATTT  600

seq1  AAAAAACCCACAGGTATAAAACTACATGATACCCAAGTGTAAGCAAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCCACAGGTATAAAACTACATGATACCCAAGTGTAAGCAAGGGA  650

seq1  AAATAACACATTTTTCTGCAAGTGGGAAGCAGAGGCAGGACGATTACTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACACATTTTTCTGCAAGTGGGAAGCAGAGGCAGGACGATTACTGA  700

seq1  ATGAGAAGAAAATGTTTGCAGGTCATGCATCTATCTCAAAACACACACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAGAAAATGTTTGCAGGTCATGCATCTATCTCAAAACACACACAC  750

seq1  ACCTTCGCACAACCTTCATACAACACACAACTTCGCACAACTTTCTTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCGCACAACCTTCATACAACACACAACTTCGCACAACTTTCTTACA  800

seq1  ACACACGCCTTCACACAACCTTCTTACAACACACGCCTTCACACAACCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGCCTTCACACAACCTTCTTACAACACACGCCTTCACACAACCCA  850

seq1  GCGACGGAAAGGCAGAAGCTCAATTTAAAACCAGGGAAAAGACGTGAATA  900
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCGACGGAAAGGCAGAAGCTCAATTT-AAACCAGGGAAAAGACGTGAATA  899

seq1  GAAGTTATTCTAGCGATATGCAAACAGCCAGCAAGCTCCTGCCCTTAGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTATTCTAGCGATATGCAAACAGCCAGCAAGCTCCTGCCCTTAGTC  949

seq1  ATCCATACACTGCCCAAGGACCCTGAGAAACT-GGAACT-GGCCTCACTG  998
      ||||||||||||||||| |||||||||||||| |||||| ||||||||||
seq2  ATCCATACACTGCCCAA-GACCCTGAGAAACTGGGAACTGGGCCTCACTG  998

seq1  AAAGCAGGAATGTTGCAGTAGTGCATTTGCTCGGGGTAATGGAGAACTTA  1048
      |||||| ||||| ||||||||||||||   |||||||||| || ||||||
seq2  AAAGCA-GAATG-TGCAGTAGTGCATTGCTTCGGGGTAAT-GAAAACTTA  1045

seq1  TGTCCTGGTTCCTCCCAGCCCTATGGGTCCAGATG-AGAGACTCAGACT  1096
      |||||| | ||||||||||||||||||| |||||| |||||||||||||
seq2  TGTCCT-GATCCTCCCAGCCCTATGGGT-CAGATGAAGAGACTCAGACT  1092