BAC Information

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BAC

Clone NameB6Ng01-167E09
Chromosome7 (Build37)
Map Location 103,925,798 - 103,926,902
singlet/doubletsinglet
Overlap geneOdz4
Upstream geneFrda-ps, EG666836, LOC670727, LOC666858
Downstream geneNars2, Gab2, LOC100040457, Usp35, EG622320, Alg8, Ndufc2, Thrsp, Kctd14, Ints4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167E09.bB6Ng01-167E09.g
ACCDH958815DH958816
length1,0941,169
definitionDH958815|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E09, 5' end.DH958816|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcttaatacaataaagcagaaaacagtagaggaaggcaccca
gcatcttgccagcatcttgctcttagtcgacttgtatatacatacaacac
acacagagagagatgtgctcactcacacacatgtgcacaattgggtgcat
acacacatacgcattagaggaaaatcctttctgatcgattttatctgtgt
gtccttctgaaccctagttcccccatctgagactcctcctccctcgttgc
agtttttgcaaacatggtaggctctgggtgccatgctgatgcttgttgga
cattaatactcagtttacctcacaagccaaagggcagggacttgtagcca
catttttcaggtgacgaaacagtcttggagaactgggaactcaggtccac
cattcactgaaatcctactctttactgaacctgttacctcccctagtgga
cagattaacagtgttgtccttcccaagagtctcacactgctgtcccaata
ctcactgtaccatcttccttccctgtcacagtggactgcatggaccccac
atgttccagcaggggtgtctgtgtcagaggcgagtgccactgctctgtgg
gatggggaggcaccaactgcgagacacccagggccacatgcttggaccag
tgctcaggccacggaaccttcctcccagacacaggactttgcaactgtga
cccaagctggactggacacgactgttccattggtaaataccggggaaagg
gttggcgagggtggagggtgggttcgactgttacaatttaacctttcagc
actggtgggggtgtggccctaactgcaaactcctcctgctgtggactcat
ttcctcttcttgcccttacattctaatctttgatgcctttcctttggtga
gcagataatttaaaaacttacactctcctcttgttcagccttgggattct
aaactgtgttgtactgggcatttctgcatagctctaccagaatgatgaga
gatgaatcaagagaagatcgtgtcggatcaaagttttcagaagttctttc
aggattgcttaaggcatgccattcttttgtaagaccagagccag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtatccaagagctaaagggattttcaacccta
taggtggacaacattatgaactaaccagtacccctggagctcctgactct
agctgcaaatgtatcaaaagaatggcctagttcggcattcattgaagaga
tgtccattgacacgcgaacttggttgcccggatacaggaacgctaggcca
agatatgaatgtgtgtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_103925798_103926902
seq2: B6Ng01-167E09.b_48_1141

seq1  GAATTCTATCTTAATACAATAAAGCAGAAAACAGTAGAGGAAGGCACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTTAATACAATAAAGCAGAAAACAGTAGAGGAAGGCACCCA  50

seq1  GCATCTTGCCAGCATCTTGCTCTTAGTCGACTTGTATATACATACAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTGCCAGCATCTTGCTCTTAGTCGACTTGTATATACATACAACAC  100

seq1  ACACAGAGAGAGATGTGCTCACTCACACACATGTGCACAATTGGGTGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGAGAGATGTGCTCACTCACACACATGTGCACAATTGGGTGCAT  150

seq1  ACACACATACGCATTAGAGGAAAATCCTTTCTGATCGATTTTATCTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATACGCATTAGAGGAAAATCCTTTCTGATCGATTTTATCTGTGT  200

seq1  GTCCTTCTGAACCCTAGTTCCCCCATCTGAGACTCCTCCTCCCTCGTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCTGAACCCTAGTTCCCCCATCTGAGACTCCTCCTCCCTCGTTGC  250

seq1  AGTTTTTGCAAACATGGTAGGCTCTGGGTGCCATGCTGATGCTTGTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTGCAAACATGGTAGGCTCTGGGTGCCATGCTGATGCTTGTTGGA  300

seq1  CATTAATACTCAGTTTACCTCACAAGCCAAAGGGCAGGGACTTGTAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATACTCAGTTTACCTCACAAGCCAAAGGGCAGGGACTTGTAGCCA  350

seq1  CATTTTTCAGGTGACGAAACAGTCTTGGAGAACTGGGAACTCAGGTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCAGGTGACGAAACAGTCTTGGAGAACTGGGAACTCAGGTCCAC  400

seq1  CATTCACTGAAATCCTACTCTTTACTGAACCTGTTACCTCCCCTAGTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACTGAAATCCTACTCTTTACTGAACCTGTTACCTCCCCTAGTGGA  450

seq1  CAGATTAACAGTGTTGTCCTTCCCAAGAGTCTCACACTGCTGTCCCAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAACAGTGTTGTCCTTCCCAAGAGTCTCACACTGCTGTCCCAATA  500

seq1  CTCACTGTACCATCTTCCTTCCCTGTCACAGTGGACTGCATGGACCCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTACCATCTTCCTTCCCTGTCACAGTGGACTGCATGGACCCCAC  550

seq1  ATGTTCCAGCAGGGGTGTCTGTGTCAGAGGCGAGTGCCACTGCTCTGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCAGCAGGGGTGTCTGTGTCAGAGGCGAGTGCCACTGCTCTGTGG  600

seq1  GATGGGGAGGCACCAACTGCGAGACACCCAGGGCCACATGCTTGGACCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGGAGGCACCAACTGCGAGACACCCAGGGCCACATGCTTGGACCAG  650

seq1  TGCTCAGGCCACGGAACCTTCCTCCCAGACACAGGACTTTGCAACTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGCCACGGAACCTTCCTCCCAGACACAGGACTTTGCAACTGTGA  700

seq1  CCCAAGCTGGACTGGACACGACTGTTCCATTGGTAAATACCGGGGAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGCTGGACTGGACACGACTGTTCCATTGGTAAATACCGGGGAAAGG  750

seq1  GTTGGCGAGGGTGGAGGGTGGGTTCGACTGTTACAATTTAACCTTTCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCGAGGGTGGAGGGTGGGTTCGACTGTTACAATTTAACCTTTCAGC  800

seq1  ACTGGTGGGGGTGTGGCCCTAACTGCAAACTCCTCCTGCTGTGGACTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGGGGGTGTGGCCCTAACTGCAAACTCCTCCTGCTGTGGACTCAT  850

seq1  TTCCTCTTCCTTGCCCTTACATTCTAATCTTTGATGCCTTTCCTCTTGGT  900
      |||||||| ||||||||||||||||||||||||||||||||||| |||||
seq2  TTCCTCTT-CTTGCCCTTACATTCTAATCTTTGATGCCTTTCCT-TTGGT  898

seq1  GAGCAGATAATTTAAAAACTTACACCCTCCCCTTGTTCAGCCTTGGGATT  950
      ||||||||||||||||||||||||| |||| |||||||||||||||||||
seq2  GAGCAGATAATTTAAAAACTTACACTCTCCTCTTGTTCAGCCTTGGGATT  948

seq1  CTAAACTGTGTTGTACTGGGCATTTCTGCATAGCTCTAACCAGAATGATG  1000
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTAAACTGTGTTGTACTGGGCATTTCTGCATAGCTCT-ACCAGAATGATG  997

seq1  AGAGAATGAATTCAAGGAGGAAAGATTCGTGTCGGATCACAGTTTTTCAG  1050
      |||| ||||| |||| |||  |||| ||||||||||||| || |||||||
seq2  AGAG-ATGAA-TCAA-GAG--AAGA-TCGTGTCGGATCAAAG-TTTTCAG  1040

seq1  AAAGTTCTTTCCAGGATTGCTTAGGGCATGCCA-TCTTTTGTAGAGCAAG  1099
       ||||||||| |||||||||||| ||||||||| |||||||||   | ||
seq2  -AAGTTCTTT-CAGGATTGCTTAAGGCATGCCATTCTTTTGTAAGACCAG  1088

seq1  AGCCAG  1105
      ||||||
seq2  AGCCAG  1094