BAC Information

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BAC

Clone NameB6Ng01-167J02
Chromosome7 (Build37)
Map Location 25,629,815 - 25,630,694
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936
Downstream geneLOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167J02.bB6Ng01-167J02.g
ACCDH959026DH959027
length881814
definitionDH959026|Mus musculus domesticus DNA, BAC clone: B6Ng01-167J02, 5' end.DH959027|Mus musculus domesticus DNA, BAC clone: B6Ng01-167J02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttggaggccacttggcctccaactcacagagatccgcctgc
ctctgcctccccagtgctgggatcaaaggcgtgcaccaccactgcccagc
tgaaaaacacctcttaaaagattttagtgcaggcacccatgcaaggtaga
agagataagatggccggatatccaggagctggagttgtaggcggttgtga
gccttccgatgtggatgctgtgaaccttccgatgtggatgctgtgaacct
tccgatgtggatgctgtgaaccttccgatgtggatgccaggtctcctgtg
agagcagtgcgcatgctcttaactgttgagccatctctcaccagttctga
aaagcacctcttgtgtttggccattcttggcacagacaagcgcagggagg
acagaaacctaggcaagtttctaagttaccgtagcttcaggacttattgt
ttaaccaagatggtcactgcttaacattttccacttttatttttattagg
tagttggaagatgagatataatttttattttgtttttgtaacattttttt
gggggtgcgagggggctggacaaaggtaatgtcttcatcaggaggatctt
tggtatatgacatttcagagggagagaatacagtgagggagagcccccaa
gctcactagtatctgtctggctgcctaccattcttccttcaagagttggg
accctaaaatcatctaggagatagacatcgggtcactcacccttactttc
ctggctgagataggaaggcgaaggcttagggtctccccctttgctgagtt
ttcagatatagagggtgaccaactaaatgctgtttagattgttacaggat
catctgagtgggatggtggatgggatggtgg
gaattctctcttgctcttcggttgtgaagagcatctgcaacagctgttga
caatcatcccaaataggctgatgagagaacataagggactccaccaaccc
tgtgaggcgttggggatcctgagaaagggggtggttagttttccagttat
aaagatcagtagaggaaaatgaccagtactgaaggttttaaagtttgggc
gggtccaccagagtctgcccagactctgtgctctgcggctccatgtaccc
acagctgtccgcctctcgacaccccgaggggtttggggttcccccagtgg
ctggggttgaggctgtggataagggggaggtagtggaccatgccactcag
gaggctttatagattttggaggagccgatgggtttagctggtggctctga
tttgggagaagccttcaatttctcttgtaacatgagagagtacaaccaca
attatgagaagcaaaacacaattttaacagtgtaaacaactttttttttt
aaatgaactcccaaaacattacttgctacaaattttggctgcctgttcct
gcatacaaacacaagaaggtgtagcctgcaatatttcaaaaagacactac
cctaaatcttatccggtttctagaataagaattacatagatttacccaat
ttcaggtgtatctttagagacatgtttccatgagttgtctcatgctgcat
gttgtagttctaaattactctaacccagagttaccagtttttaagtcaac
ttttttgttaccatggtacaaatttttaatcataaccaataaacttatga
gccactaattataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25629815_25630694
seq2: B6Ng01-167J02.b_43_923 (reverse)

seq1  CCACCATCCCATCCACCATCCCACTCAGATGGTCCTGTAACAATCTAAAC  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCACCATCCCATCCACCATCCCACTCAGATGATCCTGTAACAATCTAAAC  50

seq1  AGCATTTAGTTGGTCACCCTCTATATCTG-AAACTCAGCAAAGGGGGAGA  99
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGCATTTAGTTGGTCACCCTCTATATCTGAAAACTCAGCAAAGGGGGAGA  100

seq1  CCCTAAGCCTTCGCCTTCCTATCTCAGCCAGGAAAGTAAGGGTGAGTGAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGCCTTCGCCTTCCTATCTCAGCCAGGAAAGTAAGGGTGAGTGAC  150

seq1  CCGATGTCTATCTCCTAGATGATTTTAGGGTCCCAACTCTTGAAGGAAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATGTCTATCTCCTAGATGATTTTAGGGTCCCAACTCTTGAAGGAAGA  200

seq1  ATGGTAGGCAGCCAGACAGATACTAGTGAGCTTGGGGGCTCTCCCTCACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGGCAGCCAGACAGATACTAGTGAGCTTGGGGGCTCTCCCTCACT  250

seq1  GTATTCTCTCCCTCTGAAATGTCATATACCAAAGATCCTCCTGATGAAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTCTCCCTCTGAAATGTCATATACCAAAGATCCTCCTGATGAAGA  300

seq1  CATTACCTTTGTCCAGCCCCCTCGCACCCCCAAAAAAATGTTACAAAAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCTTTGTCCAGCCCCCTCGCACCCCCAAAAAAATGTTACAAAAAC  350

seq1  AAAATAAAAATTATATCTCATCTTCCAACTACCTAATAAAAATAAAAGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAATTATATCTCATCTTCCAACTACCTAATAAAAATAAAAGTG  400

seq1  GAAAATGTTAAGCAGTGACCATCTTGGTTAAACAATAAGTCCTGAAGCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTTAAGCAGTGACCATCTTGGTTAAACAATAAGTCCTGAAGCTA  450

seq1  CGGTAACTTAGAAACTTGCCTAGGTTTCTGTCCTCCCTGCGCTTGTCTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAACTTAGAAACTTGCCTAGGTTTCTGTCCTCCCTGCGCTTGTCTGT  500

seq1  GCCAAGAATGGCCAAACACAAGAGGTGCTTTTCAGAACTGGTGAGAGATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAATGGCCAAACACAAGAGGTGCTTTTCAGAACTGGTGAGAGATG  550

seq1  GCTCAACAGTTAAGAGCATGCGCACTGCTCTCACAGGAGACCTGGCATCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAACAGTTAAGAGCATGCGCACTGCTCTCACAGGAGACCTGGCATCC  600

seq1  ACATCGGAAGGTTCACAGCATCCACATCGGAAGGTTCACAGCATCCACAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGGAAGGTTCACAGCATCCACATCGGAAGGTTCACAGCATCCACAT  650

seq1  CGGAAGGTTCACAGCATCCACATCGGAAGGCTCACAACCGCCTACAACTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGGTTCACAGCATCCACATCGGAAGGCTCACAACCGCCTACAACTC  700

seq1  CAGCTCCTGGATATCCGGCCATCTTATCTCTTCTACCTTGCATGGGTGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTGGATATCCGGCCATCTTATCTCTTCTACCTTGCATGGGTGCC  750

seq1  TGCACTAAAATCTTTTAAGAGGTGTTTTTCAGCTGGGCAGTGGTGGTGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTAAAATCTTTTAAGAGGTGTTTTTCAGCTGGGCAGTGGTGGTGCA  800

seq1  CGCCTTTGATCCCAGCACTGGGGAGGCAGAGGCAGGCGGATCTCTGTGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTTGATCCCAGCACTGGGGAGGCAGAGGCAGGCGGATCTCTGTGAG  850

seq1  TTGGAGGCCAAGTGGCCTCCAAAGAGAATTC  880
      |||||||||||||||||||||||||||||||
seq2  TTGGAGGCCAAGTGGCCTCCAAAGAGAATTC  881