BAC Information

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BAC

Clone NameB6Ng01-171B13
Chromosome7 (Build37)
Map Location 70,398,811 - 70,495,978
singlet/doubletdoublet
Overlap genenone
Upstream geneNdn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251, Chrna7
Downstream geneOtud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171B13.bB6Ng01-171B13.g
ACCGA000070GA000071
length1,063942
definitionB6Ng01-171B13.b B6Ng01-171B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,494,910 - 70,495,978)(70,398,811 - 70,399,727)
sequence
gaattcttcctaaatgtgcacatttaaaattatgatgctatatacaggga
cattctaatggggatttggggattaatgaagaaacattatcgtaaataaa
tataaaaatcagcattctaaaggagactagttctaatgtacgatatgaac
tcttataaaatgtaaaccatcaagatgtcaacaggtacacagccagatcg
acaacaaagtgcagaataccccagagagtaaaaatatggtagtgcactaa
tgaaactcagaattgttgatgacatgttttatttaaaagtgttattgcag
aggagaggagaggaaataccattagtgttctctgcctgcagcttccaggt
ctgtagatacaaccaccctcaattcaaatcatctggaaaaagaaagccat
gtgtactctcatgtgagcatgtacctctttgctattattctctcaacagc
acagcgtaacaactaatagcccaacatttgtgatgtcctgagtattatga
gttatatggagatggtttaaagtgtacaggaagatgtatccaagtactat
gtagaaaccaaaaccaaaccaaacaaacaaattaaaaccccaaaaaataa
acacaaaaaaggaaaaacaaacaaaaacaacaaaaaacaaaagtatccta
tgattaaaggaacttggattgtgttacctgaggattcctgaatatggtct
tccacagtcactatgataaaggaaggacacagtgagccagatggtctgac
tctaaagtctgcaagtgtcccaagaattaggccaacaaggctaacccatt
aacaagatggcagacagatgtttctggagtgcactctcttacaggaacac
taatgtgaacgggtacctgacagtgcctttacaggaggagctaagggatc
ccagtgagagatgccagcacttgatggtgggatatgtaggatagatgacg
tggcaagaaagaggatagtgatttgtgttaccttcccttgtgtttaaggc
aacgcacataaggctgagaagagacagtctcttacgtgaaggaatggagt
gagattttgactt
gaattcacacgatgaaggaaagaggcctgttcacatcacagggaccgtga
agtaaagagagagaaaatgctacatacacacaattaaaaagaataaaaat
gaatcttaaaaaataaccacaagctggagatcaagccttcaacacaaggc
ctttgggagaccccccacattgaaagtaaagtctctgatttagagggaat
ggtaagctccgaagatttccaagccattagcagttttgtccagcctcttc
ccctggggcctaaaatcagctcagtatctaaccatcatcctacagcttac
tcttctcgctgacctatacattcttgcctctcctattaatacattaggtc
tcacacaagcttctatgtagctcttgctgctgttgttatgaccctcatgt
tttagtagagaaaatcattttttagcaaaaaggccaccaaaaaattagga
aaggattttaacaatcctatccaataggggcctaatatccaatatataca
aaaaactcaagaagctggactccaaaaaatcaaataaccccattaaaaaa
atggggctcagagctaaacaaagaattctcaactgaggactaccgaaagg
ctaagaagcacctgaaaaaatgttcaacatccttaatcatcagggaaatg
caaatcaaaacaaccctgagattccacctcacaccagacagaatggctaa
gatcaaaaattcaggtgacagcagatgctggcgaggatgtggagaaagag
caacaatcctccattgctggtgggattgcaagcttgtacaaccactctgg
aaatcagactggcagtttctcagaaaattggacatagtactaccgggatg
atccagcaaatcctctcctgggcatctatccagaagatgttccaactagt
aataagaacacatgctcccactatgttcatagcagctttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70494910_70495978
seq2: B6Ng01-171B13.b_49_1111 (reverse)

seq1  AAGTAAAATACTCACTCCATTCTCCTTCCACGT-AGAGACTGTCTCTCTC  49
      |||| |||  ||||||||||  ||||| ||||| ||||||||||||| ||
seq2  AAGTCAAAATCTCACTCCAT--TCCTT-CACGTAAGAGACTGTCTCT-TC  46

seq1  CAGGCTTTATGTTGCCGTTGCC-TAGACACAAGGGAAGGTAACACAAATC  98
         || ||||||   ||||||| || ||||||||||||||||||||||||
seq2  TCAGCCTTATGT--GCGTTGCCTTAAACACAAGGGAAGGTAACACAAATC  94

seq1  ACTATCCTCCTTCCTGCCCACGTTCATCTATCCTACATATCCCACCATCA  148
      ||||||||| ||| || ||||| |||||||||||||||||||||||||||
seq2  ACTATCCTCTTTCTTG-CCACG-TCATCTATCCTACATATCCCACCATCA  142

seq1  GGTGCTGGCATCTCTCACTGGGATTCCTTAGCTCCTCCTGTAAAGGCACT  198
       ||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGTGCTGGCATCTCTCACTGGGATCCCTTAGCTCCTCCTGTAAAGGCACT  192

seq1  GTCAGGTACCCGTTCACATTAGTGTTCCTGTAAGGGAGTGCACTCCAGAA  248
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTCAGGTACCCGTTCACATTAGTGTTCCTGTAAGAGAGTGCACTCCAGAA  242

seq1  ACATCTGTCTGCCATCTTGTTAATGGGTTAGCCTTGTTGGCCTAATTCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTCTGCCATCTTGTTAATGGGTTAGCCTTGTTGGCCTAATTCTT  292

seq1  GGGACACTTGCAGACTTTAGAGTCAGACCATCTGGCTCACTGTGTCCTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACTTGCAGACTTTAGAGTCAGACCATCTGGCTCACTGTGTCCTTC  342

seq1  CTTTATCATAGTGACTGTGGAAGACCATATTCAGGAATCCTCAGGTAACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCATAGTGACTGTGGAAGACCATATTCAGGAATCCTCAGGTAACA  392

seq1  CAATCCAAGTTCCTTTAATCATAGGATACTTTTGTTTTTTGTTGTTTTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCAAGTTCCTTTAATCATAGGATACTTTTGTTTTTTGTTGTTTTTG  442

seq1  TTTGTTTTTCCTTTTTTGTGTTTATTTTTTGGGGTTTTAATTTGTTTGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTCCTTTTTTGTGTTTATTTTTTGGGGTTTTAATTTGTTTGTT  492

seq1  TGGTTTGGTTTTGGTTTCTACATAGTACTTGGATACATCTTCCTGTACAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGGTTTTGGTTTCTACATAGTACTTGGATACATCTTCCTGTACAC  542

seq1  TTTAAACCATCTCCATATAACTCATAATACTCAGGACATCACAAATGTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACCATCTCCATATAACTCATAATACTCAGGACATCACAAATGTTG  592

seq1  GGCTATTAGTTGTTACGCTGTGCTGTTGAGAGAATAATAGCAAAGAGGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTAGTTGTTACGCTGTGCTGTTGAGAGAATAATAGCAAAGAGGTA  642

seq1  CATGCTCACATGAGAGTACACATGGCTTTCTTTTTCCAGATGATTTGAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCACATGAGAGTACACATGGCTTTCTTTTTCCAGATGATTTGAAT  692

seq1  TGAGGGTGGTTGTATCTACAGACCTGGAAGCTGCAGGCAGAGAACACTAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTGGTTGTATCTACAGACCTGGAAGCTGCAGGCAGAGAACACTAA  742

seq1  TGGTATTTCCTCTCCTCTCCTCTGCAATAACACTTTTAAATAAAACATGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTCCTCTCCTCTCCTCTGCAATAACACTTTTAAATAAAACATGT  792

seq1  CATCAACAATTCTGAGTTTCATTAGTGCACTACCATATTTTTACTCTCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACAATTCTGAGTTTCATTAGTGCACTACCATATTTTTACTCTCTG  842

seq1  GGGTATTCTGCACTTTGTTGTCGATCTGGCTGTGTACCTGTTGACATCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTCTGCACTTTGTTGTCGATCTGGCTGTGTACCTGTTGACATCTT  892

seq1  GATGGTTTACATTTTATAAGAGTTCATATCGTACATTAGAACTAGTCTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTTACATTTTATAAGAGTTCATATCGTACATTAGAACTAGTCTCC  942

seq1  TTTAGAATGCTGATTTTTATATTTATTTACGATAATGTTTCTTCATTAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAATGCTGATTTTTATATTTATTTACGATAATGTTTCTTCATTAAT  992

seq1  CCCCAAATCCCCATTAGAATGTCCCTGTATATAGCATCATAATTTTAAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATCCCCATTAGAATGTCCCTGTATATAGCATCATAATTTTAAAT  1042

seq1  GTGCACATTTAGGAAGAATTC  1069
      |||||||||||||||||||||
seq2  GTGCACATTTAGGAAGAATTC  1063

seq1: chr7_70398811_70399727
seq2: B6Ng01-171B13.g_68_985

seq1  GAATTCACACGATGAAGGAAAGAGGCCTGTTCACATCACAGGGACCGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACGATGAAGGAAAGAGGCCTGTTCACATCACAGGGACCGTGA  50

seq1  AGTAAAGAGAGAGAAAATGCTACATACACACAATTAAAAAGAATAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGAGAGAGAAAATGCTACATACACACAATTAAAAAGAATAAAAAT  100

seq1  GAATCTTAAAAAATAACCACAAGCTGGAGATCAAGCCTTCAACACAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTAAAAAATAACCACAAGCTGGAGATCAAGCCTTCAACACAAGGC  150

seq1  CTTTGGGAGACCCCCCACATTGAAAGTAAAGTCTCTGATTTAGAGGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGAGACCCCCCACATTGAAAGTAAAGTCTCTGATTTAGAGGGAAT  200

seq1  GGTAAGCTCCGAAGATTTCCAAGCCATTAGCAGTTTTGTCCAGCCTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGCTCCGAAGATTTCCAAGCCATTAGCAGTTTTGTCCAGCCTCTTC  250

seq1  CCCTGGGGCCTAAAATCAGCTCAGTATCTAACCATCATCCTACAGCTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGGCCTAAAATCAGCTCAGTATCTAACCATCATCCTACAGCTTAC  300

seq1  TCTTCTCGCTGACCTATACATTCTTGCCTCTCCTATTAATACATTAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCGCTGACCTATACATTCTTGCCTCTCCTATTAATACATTAGGTC  350

seq1  TCACACAAGCTTCTATGTAGCTCTTGCTGCTGTTGTTATGACCCTCATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAAGCTTCTATGTAGCTCTTGCTGCTGTTGTTATGACCCTCATGT  400

seq1  TTTAGTAGAGAAAATCATTTTTTAGCAAAAAGGCCACCAAAAAATTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAGAGAAAATCATTTTTTAGCAAAAAGGCCACCAAAAAATTAGGA  450

seq1  AAGGATTTTAACAATCCTATCCAATAGGGGCCTAATATCCAATATATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTTTAACAATCCTATCCAATAGGGGCCTAATATCCAATATATACA  500

seq1  AAAAACTCAAGAAGCTGGACTCCAAAAAATCAAATAACCCCATTAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCAAGAAGCTGGACTCCAAAAAATCAAATAACCCCATTAAAAAA  550

seq1  ATGGGGCTCAGAGCTAAACAAAGAATTCTCAACTGAGGACTACCGAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAGCTAAACAAAGAATTCTCAACTGAGGACTACCGAAAGG  600

seq1  CTAAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG  650

seq1  CAAATCAAAACAACCCTGAGATTCCACCTCACACCAGACAGAATGGCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAAAACAACCCTGAGATTCCACCTCACACCAGACAGAATGGCTAA  700

seq1  GATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAG  750

seq1  CAACAATCCTCCATTGCTGGTGGGATTGCAAGCTTGTACAACCACTCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATCCTCCATTGCTGGTGGGATTGCAAGCTTGTACAACCACTCTGG  800

seq1  AAATCAGACTGGCAGTTTCTCAGAAAATTGGACATAGTACTACC-GGATG  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAATCAGACTGGCAGTTTCTCAGAAAATTGGACATAGTACTACCGGGATG  850

seq1  ATCCAGCAAATCCTCTCCTGGGCATCTATCCAGAAGATGTTCCAACTAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCAAATCCTCTCCTGGGCATCTATCCAGAAGATGTTCCAACTAGT  900

seq1  AATAAGAACACATGCTCC  917
      ||||||||||||||||||
seq2  AATAAGAACACATGCTCC  918