BAC Information

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BAC

Clone NameB6Ng01-172F07
Chromosome7 (Build37)
Map Location 33,227,121 - 33,228,351
singlet/doubletsinglet
Overlap geneEG384589
Upstream geneLOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373
Downstream geneEG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172F07.bB6Ng01-172F07.g
ACCGA000978GA000979
length1,2141,048
definitionB6Ng01-172F07.b B6Ng01-172F07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttctggcccggtcccactctgatttccaggctgaaattctgt
tcactgtgaggagcaggaagcctcacaacaacctttgaaataggtacttt
tattttattttctacatgggaaacactgtgacacacagaaacgcacaact
ggatcatgtaccaaacactagggagcagggacagtttctgctatctagac
ctgtgtggtcctcaacagaccattggtatttctggtactcctcagttcca
tgttcctggggagttcagtctgggaggtcatgcatgtgccctgtggaccc
tgtcccatgagggtgacagaaactctagtgtagtgactatggtcttttag
cattctctaatgcattctgcagggcattttggcagcaccacaattgagct
gtgacaactcaatgtcccagaggttgtccctgcaatatccttaaaccaaa
tcagacccaaccttgaattcaaaaatccaggctcccctttgaattgcaag
gttttattgtttgattcctgttcttagacacctggagtgaaggactataa
tctgctgcatctatgcaggtaggcaggcaagtggcttccttgagaccaaa
gttgtagccatcaacatagcgggctggcttctatcttttcctgcaaacag
aaagccaagtgaaacctttggggtgaaggagacctcaggcaccactgacc
atgcaatgagacacctcctagaaagacctgcatccaatatgcaattgctc
ttgtatcaggacaaaggagccttgtctccaacctattgagacaactttga
aaagagcctcaaatctagccatatgggaggagacaacttgtatgacaaca
tagtcccagtggcaccaaatgtggaggagctcaaagagcaccacgtgagc
ctttgggaagctggggccacacaagtaaactgaccactgtcacatgttga
tgatgaccctcaaatatcttcagctaaaggcagggacttaacacaccagt
tctagggacatgaggcctgttcacttcatcctatcctgaatgtccacacg
tggaatccacaaaggtgccttcaagtcagagaacagataacatagacttt
tttggagatggagtggtagtttggaacttaggataaagaccaagcctaga
gaaggtgcaggtgccagctcggaactgactgcaggcttgtagcaggctga
gggagggaccaaac
gaattctttgtttagctctgtacccccattaaaatggggttacttgaatt
tctggagttcagtttcttgagctctttgtatatattgcatattagtcccc
tatcagaattagaattggtaaaaatactttcccaatctgttggtggcctt
tttgtcatattgactgtgtcttttgccttacagaagctttgcagttttat
gaggttccacttgtgaattcatgatcttacagcacaaaacattgcggttc
tgtttaggaattattccactctacccatatttttgaggcttttccccact
ttatcctctataactttccgtgtttctggtttgatgtgatggtctttctt
ctacttagacttgaggtttgtaaggtgagataagaatggatgaatttgta
ttcttctacattataaccaccagttgtgccagcaccattttttgaaaatg
ctgactttttaccactgcatggtttaattccattgtcaaagatcaactga
ccataggtgtgtggatttatttctgggtcttcaattgtattccattgatc
tacctgtctgtctctgaaccagtaccatgctatttttatcacaattgctc
tgtagtacagcttaagtttagacatggtgattccagcagaggttctttta
ttgttgacaatagtttttgctatcctactttcaaaggatagacattttga
ttatattaatcctgccaatccatgagcatgggagatctttccatcttctg
agatcttcttgaaattctttcttcagagacttgaagttcttatcatagag
atttttcacttccttagttagagacacactaaggtattttgtattatttg
tgagtattgagaagggtgttgtttcactaattttttctcagtcaggttat
cccttgtggagagaatgaccattgatttggtttgagttaatttttaaatc
cagcctaactttccctgagccctgttatcaggtttagtgtctctggggat
ttcttaggccacttacatataccatcatatcctctggcaaaatgagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33227121_33228351
seq2: B6Ng01-172F07.b_44_1257 (reverse)

seq1  GTTTGG--CCTCCCTCAGCCTTCCTACAAAGCCTTCCAAGTCTAGCTACA  48
      ||||||  |||||||||||| | |||| |||||| |  |||| || | | 
seq2  GTTTGGTCCCTCCCTCAGCC-TGCTAC-AAGCCTGC--AGTC-AGTTCC-  44

seq1  GAAGCTTGGCACCTGGCACCTTTCTCTAGCCTGGGTCTTTTATCCTAAAT  98
        ||| |||||||| ||||| |||||||| || |||| ||||||||||  
seq2  -GAGC-TGGCACCT-GCACC-TTCTCTAGGCTTGGTC-TTTATCCTAA--  87

seq1  TTTCAAACCTACCACTCCATCTCCAAAAAAGTCCTATGTTATCCTGTTCT  148
       ||| || |||||||||||||||||||||||| ||||||||| |||||||
seq2  GTTCCAAACTACCACTCCATCTCCAAAAAAGT-CTATGTTAT-CTGTTCT  135

seq1  CTGAACTTTGAAGGCCACTTTGTGGATTCCACGTGTGGACATTCAAGGAT  198
      ||||   ||||||||  ||||||||||||||||||||||||||| |||||
seq2  CTGA--CTTGAAGGCACCTTTGTGGATTCCACGTGTGGACATTC-AGGAT  182

seq1  AGGATTGAAGTGAACAGGCCTCATGTCCCTAGAACTGGTGTGTTAAGTCC  248
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGA-TGAAGTGAACAGGCCTCATGTCCCTAGAACTGGTGTGTTAAGTCC  231

seq1  CTGCCTTTAGCTGAAGATATTTGAGGGTCATCATCAACATGTGACAGTGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTAGCTGAAGATATTTGAGGGTCATCATCAACATGTGACAGTGG  281

seq1  TCAGTTTACTTGTGTGGCCCCAGCTTCCCAAAGGCTCACGTGGTGCTCTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTACTTGTGTGGCCCCAGCTTCCCAAAGGCTCACGTGGTGCTCTT  331

seq1  TGAGCTCCTCCACATTTGGTGCCACTGGGACTATGTTGTCATACAAGTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCCTCCACATTTGGTGCCACTGGGACTATGTTGTCATACAAGTTG  381

seq1  TCTCCTCCCATATGGCTAGATTTGAGGCTCTTTTCAAAGTTGTCTCAATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCCATATGGCTAGATTTGAGGCTCTTTTCAAAGTTGTCTCAATA  431

seq1  GGTTGGAGACAAGGCTCCTTTGTCCTGATACAAGAGCAATTGCATATTGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGAGACAAGGCTCCTTTGTCCTGATACAAGAGCAATTGCATATTGG  481

seq1  ATGCAGGTCTTTCTAGGAGGTGTCTCATTGCATGGTCAGTGGTGCCTGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGTCTTTCTAGGAGGTGTCTCATTGCATGGTCAGTGGTGCCTGAG  531

seq1  GTCTCCTTCACCCCAAAGGTTTCACTTGGCTTTCTGTTTGCAGGAAAAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTTCACCCCAAAGGTTTCACTTGGCTTTCTGTTTGCAGGAAAAGA  581

seq1  TAGAAGCCAGCCCGCTATGTTGATGGCTACAACTTTGGTCTCAAGGAAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCCAGCCCGCTATGTTGATGGCTACAACTTTGGTCTCAAGGAAGC  631

seq1  CACTTGCCTGCCTACCTGCATAGATGCAGCAGATTATAGTCCTTCACTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCCTGCCTACCTGCATAGATGCAGCAGATTATAGTCCTTCACTCC  681

seq1  AGGTGTCTAAGAACAGGAATCAAACAATAAAACCTTGCAATTCAAAGGGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCTAAGAACAGGAATCAAACAATAAAACCTTGCAATTCAAAGGGG  731

seq1  AGCCTGGATTTTTGAATTCAAGGTTGGGTCTGATTTGGTTTAAGGATATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGATTTTTGAATTCAAGGTTGGGTCTGATTTGGTTTAAGGATATT  781

seq1  GCAGGGACAACCTCTGGGACATTGAGTTGTCACAGCTCAATTGTGGTGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGACAACCTCTGGGACATTGAGTTGTCACAGCTCAATTGTGGTGCT  831

seq1  GCCAAAATGCCCTGCAGAATGCATTAGAGAATGCTAAAAGACCATAGTCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAATGCCCTGCAGAATGCATTAGAGAATGCTAAAAGACCATAGTCA  881

seq1  CTACACTAGAGTTTCTGTCACCCTCATGGGACAGGGTCCACAGGGCACAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTAGAGTTTCTGTCACCCTCATGGGACAGGGTCCACAGGGCACAT  931

seq1  GCATGACCTCCCAGACTGAACTCCCCAGGAACATGGAACTGAGGAGTACC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACCTCCCAGACTGAACTCCCCAGGAACATGGAACTGAGGAGTACC  981

seq1  AGAAATACCAATGGTCTGTTGAGGACCACACAGGTCTAGATAGCAGAAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATACCAATGGTCTGTTGAGGACCACACAGGTCTAGATAGCAGAAAC  1031

seq1  TGTCCCTGCTCCCTAGTGTTTGGTACATGATCCAGTTGTGCGTTTCTGTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGCTCCCTAGTGTTTGGTACATGATCCAGTTGTGCGTTTCTGTG  1081

seq1  TGTCACAGTGTTTCCCATGTAGAAAATAAAATAAAAGTACCTATTTCAAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAGTGTTTCCCATGTAGAAAATAAAATAAAAGTACCTATTTCAAA  1131

seq1  GGTTGTTGTGAGGCTTCCTGCTCCTCACAGTGAACAGAATTTCAGCCTGG  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTGTGAGGCTTCCTGCTCCTCACAGTGAACAGAATTTCAGCCTGG  1181

seq1  AAATCAGAGTGGGACCGGGCCAGAACAGAATTC  1231
      |||||||||||||||||||||||||||||||||
seq2  AAATCAGAGTGGGACCGGGCCAGAACAGAATTC  1214