BAC Information

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BAC

Clone NameB6Ng01-172F20
Chromosome7 (Build37)
Map Location 144,511,206 - 144,512,051
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546009, EG621677, EG668771, Mgmt, EG621804, Ebf3
Downstream gene9430038I01Rik, Txnl2, LOC435235, Tcerg1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172F20.bB6Ng01-172F20.g
ACCGA000998GA000999
length969851
definitionB6Ng01-172F20.b B6Ng01-172F20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatgtttagctctgtgccctattttttaatagagttatttggtt
ctctggagtctaccttcttgagttctttgtatagattgaatattagccct
ctatcagacatagggttggtaaagatcattttcccaatccttagattgcc
attttgtcctattgacagtgtcctttgccttacagaagcttttcaagttt
atgaggtcccatttgtcaattgttgatcttagagcctgagacattggtgt
tctgttcaggaaaatttcccctgaaccgatgtgttcaaggctctttccca
ctttctcttctattagattcagtgtatctggttgtgctagagcggtgagg
cgggagtgggtaagtgggtggaggagcaatctcttaaacgcaaacggaaa
gaaatctggaaatgaaaattttaagaactcagaaaaggccgggcagcacc
tgggaggcagaggcaggcagatttctgagttcgaagccagcctggtctac
aaagtgagttccaggacagccagagctatactgagaaaccctgtctcaaa
aaaacaaaacaaaacaaaacaaaacaaaacaaaacaaactcagaaaagaa
actcagaggtaagcttcaccaacagagtacaagattcagaaaagagaaca
tcaggcattgaagacacaatagaaaaaaatagatattttggataaataaa
atgttaaacctggggctggagagatggctcagtggttaagattactgact
gctcttccaaaggtcctgagttcaatcccagcaaccacatggtggctcac
agccatctgtaatgagatctgatgccctcttctggtgtgtctgaagacag
ctacagtatatacacataataaataaataaattcttttttttttaaatgt
taaaccttaaaaaaacaaaaacaaaaaaaaaaaaaaacccaaaaaactta
gaataattaggaatagagg
gaattctactggcaaactttcgagggctagaacatggcacccatcagcgt
ccaggaaagagttaagatttatggcttgctggaggagtcttgttaagatg
taatctgcatttttaaactactgcgtaataaaaagtgagaagttttgaga
cacctttcttgattatacctttggcgatactttaggttttacatttaatt
tgcattttgttcttagagagtattgaagtcttgagtggaggattgaattt
tattaggacatctggactgacaatatcaaatcaaacaccagtgtcccaaa
gcatgctaaaatttcagagttaattagaacgcagtgtgtttaattaaagc
caattataatatctgaaattatctgatcgatccgtgtttgtactgtttgg
ttctgtttaagtgttgattggcgcactttgtgcgctgttcgatccaaaaa
cttctctagggaaagtttgctttgtaaattggcgcgggcaggcagtgtgg
actccgtgtcccaggcgctggttctggggcatccaacaggaccgccttta
gagcaccgctgaacgcagctagggaaatcccagcttgttgctaaaccgct
gctccttttcgggtctgagagaccccgccacacaccagctgtctttcaga
gctccgttgctcctccaaagtgccccccccctcggagaggcgacctttaa
ggttgtaaggtgggatgggagaaacccaagcttccgcgtgtctcgagttg
ggactcccggtgtgtctgatcagtccatcaggactcactgacgaactgta
tggtcagtctaattatccgaatggaaatcgggaaaagtaaagggcagaga
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_144511206_144512051
seq2: B6Ng01-172F20.g_62_912 (reverse)

seq1  CTCTCTGCCC-TTACTTTTCCCTATCTCC-TTCGGTCACTTTGGCTGACC  48
      |||||||||| ||||||||||| || ||| |||||  | || | ||||||
seq2  CTCTCTGCCCTTTACTTTTCCCGATTTCCATTCGGATAATTAGACTGACC  50

seq1  CTACAGTTCG-GAGTGAGTCCTGA-GGACTCTTCAGACACACCGGGAATC  96
       |||||||||  |||||||||||| |||||  ||||||||||||||| ||
seq2  ATACAGTTCGTCAGTGAGTCCTGATGGACTGATCAGACACACCGGGAGTC  100

seq1  CCAACTC-AAACACGCGGAAGCTTGGGTTTCTCCCATCCCACCTTACAAC  145
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCGAGACACGCGGAAGCTTGGGTTTCTCCCATCCCACCTTACAAC  150

seq1  CTTAAAGGTCGCCTCTCCGAGGGGGGGGGCACTTTGGAGGAGCAACGGAG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGGTCGCCTCTCCGAGGGGGGGGGCACTTTGGAGGAGCAACGGAG  200

seq1  CTCTGAAAGACAGCTGGTGTGTGGCGGGGTCTCTCAGACCCGAAAAGGAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAAGACAGCTGGTGTGTGGCGGGGTCTCTCAGACCCGAAAAGGAG  250

seq1  CAGCGGTTTAGCAACAAGCTGGGATTTCCCTAGCTGCGTTCAGCGGTGCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGGTTTAGCAACAAGCTGGGATTTCCCTAGCTGCGTTCAGCGGTGCT  300

seq1  CTAAAGGCGGTCCTGTTGGATGCCCCAGAACCAGCGCCTGGGACACGGAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGCGGTCCTGTTGGATGCCCCAGAACCAGCGCCTGGGACACGGAG  350

seq1  TCCACACTGCCTGCCCGCGCCAATTTACAAAGCAAACTTTCCCTAGAGAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTGCCTGCCCGCGCCAATTTACAAAGCAAACTTTCCCTAGAGAA  400

seq1  GTTTTTGGATCGAACAGCGCACAAAGTGCGCCAATCAACACTTAAACAGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGATCGAACAGCGCACAAAGTGCGCCAATCAACACTTAAACAGA  450

seq1  ACCAAACAGTACAAACACGGATCGATCAGATAATTTCAGATATTATAATT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACAGTACAAACACGGATCGATCAGATAATTTCAGATATTATAATT  500

seq1  GGCTTTAATTAAACACACTGCGTTCTAATTAACTCTGAAATTTTAGCATG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTAATTAAACACACTGCGTTCTAATTAACTCTGAAATTTTAGCATG  550

seq1  CTTTGGGACACTGGTGTCTGATTTGATATTGTCAGTCCAGATGTCCTAAT  595
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTTTGGGACACTGGTGTTTGATTTGATATTGTCAGTCCAGATGTCCTAAT  600

seq1  AAAATTCAATCCTCCACTCAAGACTTCAATACTCTCTAAGAACAAAATGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCAATCCTCCACTCAAGACTTCAATACTCTCTAAGAACAAAATGC  650

seq1  AAATTAAATGTAAAACCTAAAGTATCGCCAAAGGTATAATCAAGAAAGGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAATGTAAAACCTAAAGTATCGCCAAAGGTATAATCAAGAAAGGT  700

seq1  GTCTCAAAACTTCTCACTTTTTATTACGCAGTAGTTTAAAAATGCAGATT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAAAACTTCTCACTTTTTATTACGCAGTAGTTTAAAAATGCAGATT  750

seq1  ACATCTTAACAAGACTCCTCCAGCAAGCCATAAATCTTAACTCTTTCCTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTAACAAGACTCCTCCAGCAAGCCATAAATCTTAACTCTTTCCTG  800

seq1  GACGCTGATGGGTGCCATGTTCTAGCCCTCGAAAGTTTGCCAGTAGAATT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCTGATGGGTGCCATGTTCTAGCCCTCGAAAGTTTGCCAGTAGAATT  850

seq1  C  846
      |
seq2  C  851