BAC Information

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BAC

Clone NameB6Ng01-172G21
Chromosome7 (Build37)
Map Location 23,275,503 - 23,276,022
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625, LOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058
Downstream geneEG435947, EG667504, EG667512, LOC100043061, LOC100043638, LOC667527, EG667530, LOC667536, EG667543, LOC100043645, EG667551, LOC100043650, LOC100043067, LOC100043069, LOC670857, LOC620758, EG667570, LOC100043658, LOC100043079, LOC100043083, EG667586, EG667599, LOC100043086, LOC100043665, LOC667616, LOC100043667, LOC667623, LOC100043088, EG628664, Nlrp4e, LOC434261, Nlrp5, LOC100043095
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172G21.bB6Ng01-172G21.g
ACCGA001045GA001046
length9471,176
definitionB6Ng01-172G21.b B6Ng01-172G21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtacaaggttgaataggtagggagaaagtgggcagccttgtc
tagtccctgatttagtgggattgcttccagcttctgaccatttactttga
tgttggccactggtttgctgtagattgcttttatcatgtttaggtatggg
ccttgaattcctgattgttgtaagaatttgtcaaatgttttctcctcatc
tgaggagctgatcatgtggttttcatctttgtgtttgtttatataatgga
ttacgttgatggatttccgtatattaaaccatctctgcatccctggaatg
aaacatatttggtcagtagggatgattgttttaatgtgttcttagattcg
gttagcgagaattttattgagaatttttgcatcaatattcataagggaaa
ttggtctgaagttctctatctttgcatctttctgtggtttaggtatcaga
gtaattgtggcttcatagaatgaattgggtagagtaccttttgcttctat
tttgtggagtagtttgtgcataattggaattagatcatctttgaaggtct
gatagaactctgcactaaacccatctatttctgggctttttttttttttt
tttggttgggagactattaatgactgcttctatttctttaggggatatgg
gactatttagatcattaacttgatcttgatttaatttagtacctggtatc
tgtctagaaatttgccaatttcatccatgttttccagtttcattgagtat
agccttttgtagaaggatctcatgatgttttctgatttcttcaggatctg
ttgttatctgtcccttttcatttttgattttgttaataggatgatgtccc
tgtgcccacttgtgagtctggctaaagggtttatctatcttgttgatttc
tcaagaaccagctccctgtttgggttgattctttgaatagtcttctt
gaattcaaagaaaatgaaggcacagaatacccaaacttatggagcacaat
gaaagcaatgagtgctaagaggaaagttcatagcaccaagtaccttcata
aagacatcacagagatcctgtactagcaaattaatagcacacctgacagc
tctagaaccaataaaagcaaacacaaccagaaagtctaaatggcaataat
caagccataaattagaaacaaaaggaacaacacaaagaatcagcaaaact
aagagctgcttcttttagataatcaacaacatcaacaaacccttggccaa
ctaagtaaaaggcacagataatatacaaattaacaaaatcataaagtaaa
agggatgtgcaacaacacaaactggggaaataaaaaacaaaaataattgt
atcttaattccaaagtctctactccacaaaactggaaaatctagataaag
ttgataattttctagagagatacaatgtaccaaagttaaatcaagttcag
gtaaactatttgaacagaacaataaccccaaaggaaagagaatcagtgat
taatagattcccaaacaatcaaacaaataaatctcagggccagataattt
tagtacaaaatagaggtctaccagactttcaaagaaatgcttataataat
attcctcaaactattccaaaaaatcgatgcagaagaaacactatgtaatt
tattttatgacactgcaattatccatatagataaaccacacaaagactca
aaaaaaggagagagatcttcagaccaattttacttatgaatttcaaagca
aaaatattcaatacaattattgaaaactgaatccaagaaaacatcaaaaa
taccattcactaaaaccaagtagccttcatccaagggctacagagatggg
ttcaatatacaaaaacccatcaatgcaatctatatatcatctcattaaat
gcaaaatgggaaaaatcttcaacaaagttcagcacctcttcatgttaaag
tcttggagtgatcagggattaaaaggtacatactaaacataaagcaaagt
catgtacaatgagcaaaaacacatcaggttaaatggagagaacctgagcc
atctactaaatcatgacaagatggcagtctctcttatctctcgagtatag
acaattttaagttttgagaccttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_23275503_23276022
seq2: B6Ng01-172G21.b_462_983 (reverse)

seq1  AAGAAGAACTATTCAAAGAATCAA-CCAAACGAAGAGCTGGTTCCTTGAG  49
      |||||| ||||||||||||||||| ||||||   ||||||||| ||||||
seq2  AAGAAG-ACTATTCAAAGAATCAACCCAAACAGGGAGCTGGTT-CTTGAG  48

seq1  AAAATGAACAAGATAGATAAACCC-TTAGCCAGACTCACTAAAAAGGGCA  98
       |||| |||||||||||||||||| ||||||||||||||  ||  |||||
seq2  -AAATCAACAAGATAGATAAACCCTTTAGCCAGACTCAC--AAGTGGGCA  95

seq1  CAGGGACAGCATCCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAA  148
      |||||||| |||||| ||||||||||||| ||||||||||||| | ||||
seq2  CAGGGACATCATCCT-ATTAACAAAATCAAAAATGAAAAGGGACAGATAA  144

seq1  CAACAGATCCTGAAGAAATC-CAAAACACCATCAGATCCTTCTACAAAAG  197
      ||||||||||||||||||||  |||||| ||| |||||||||||||||||
seq2  CAACAGATCCTGAAGAAATCAGAAAACATCATGAGATCCTTCTACAAAAG  194

seq1  GCTATACTCAACAAAACTGGAAAACCTGGATGAAATGGACAAATTTCTAG  247
      |||||||||||  |||||||||||| |||||||||| | |||||||||||
seq2  GCTATACTCAATGAAACTGGAAAACATGGATGAAATTGGCAAATTTCTAG  244

seq1  ACAGATACCAGGTACCAAAGTTAAATCAGGATCAGGTTAATGATCTAAAC  297
      ||||||||||||||| ||| |||||||| ||||| |||||||||||||| 
seq2  ACAGATACCAGGTACTAAA-TTAAATCAAGATCAAGTTAATGATCTAAAT  293

seq1  AGTCCCATATCCCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCCTAAC  347
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGTCCCATATCCCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCCCAAC  343

seq1  C------AAAAAAAAAAAGCCCAGGACCAGATAGATTTAGTTCGGAGTTC  391
      |      ||||||||||||||||| |  |||| | |||||| | ||||||
seq2  CAAAAAAAAAAAAAAAAAGCCCAGAAATAGATGGGTTTAGTGCAGAGTTC  393

seq1  TATCAGACCTTCAAAAAAGATCTAATTCCAGCACTGCACAAACTATTCCA  441
      ||||||||||||||| | ||||||||||||    ||||||||||| ||||
seq2  TATCAGACCTTCAAAGATGATCTAATTCCAATTATGCACAAACTACTCCA  443

seq1  CAAAATAGAAGCAGAATGTAATCTACCTAACTCATTCTATGAAGCCACAA  491
      ||||||||||||| || ||| |||||| || |||||||||||||||||||
seq2  CAAAATAGAAGCAAAAGGTACTCTACCCAATTCATTCTATGAAGCCACAA  493

seq1  TTACTCTGATACCTAAACCACAGAAAGAT  520
      |||||||||||||||||||||||||||||
seq2  TTACTCTGATACCTAAACCACAGAAAGAT  522