BAC Information

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BAC

Clone NameB6Ng01-173C06
Chromosome7 (Build37)
Map Location 65,347,478 - 65,348,601
singlet/doubletsinglet
Overlap genenone
Upstream geneGabrg3, Gabra5, Gabrb3, EG668807, LOC434189
Downstream geneAtp10a, LOC621446, LOC668811, LOC668813
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173C06.bB6Ng01-173C06.g
ACCGA001571GA001572
length1,127744
definitionB6Ng01-173C06.b B6Ng01-173C06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatatcccaaggcagccactaggagactagcttctacactgggt
ggagtttgagcataggagacttcaaagcctgcccctagagtgacacactt
cctcccaaaagaccacacctcataatagtaccactctccacggaccaagc
attcaatcacatgaatctatgggggacatacctattcaaaccactcaagg
gggcaatatcccttaggctcatcataaatgtttaattacagtattcttta
caagaaaattgtataagattactattccacagaataaaaaaggatgtctc
tctctagctgggcactggcattaaaggtcaggagaacaagaacttctgca
gcaagatttaagtggaccaatacaactctaagcaagtgatggaggtcagt
cctacagggctgcagcaccaggaagcatggggatagactataatataagc
cttgctttcacaaaaagagagaaggcataatcagaattgaaggctgatga
tgttgatgcttgactctagagaactccaggtcataacagaaagaagatag
tttacatttaaccttctttgctaaagtctcaggaagatttcttcccaagt
atgatgttggaacctgtctattgtattttggatgactagctctggcttcc
tgttaccttgtgtcacttttggtcagagcagaggccaacaaaggagaagc
atggcttcaagactgctgccataagcctgcatatactgtgagtatacaga
ggcaagatggctgcccaaagtcatgtgtctcaagattttcacatacactc
attcaggattcccatcactatgcaagaggtctgagtggtttttttgggcc
tgcatttctaagacattccaatacactgtttactatggatctatacatgg
agggagatgtttttaaaccatcttttaaactcttactttcacatttttat
ttcactcaaggaggttctaaacccaccctgttacaatggagctctaagtc
attgtcatgatctccctccctcccctctcctttctctctctttctctctc
tcttctttccccctctctgtgtctgcctgtttctgctgtttggactctct
aaataatatggtatatatttgcctttt

gaattctttgttcagttctgagccccattttttaatggggttatttgaat
ttctgaagtccaccttcttgagttctttatatatgttggatattagtcca
aaaggggacttttttccctggtacaatctatttggtgttctatgtgcttt
atctatctatctatctatctatctatctatctatctatctatctatttat
ttatttaacctgtataggcatctctatctttaggttaggaaatttttcat
ctattatcttgttgaaaatattttctacgtcttttagctgccactattct
ttctcccctcttttcattatttctagatttagtcatttcataatgtccca
gatttcctggatgttttatgtcaggagatttttagatttaactttttctt
ttacagatgtatctatgtcttttatcatatcgttaacttctaggattctc
tctctctctctctctctctctctctctctctctctctctctctctcatct
tttgtattctgttgaagctttcctatgcacttcatgtatcgattcctaaa
atttttaatttcccgcagatcccctcagattgtattttcatttcacccta
tatctatattttaggacttgaataggttcattcactgtccttgtgtgtgt
gggtttgtcttggatgttcttaaggggattatttatctccctcatttttt
gaggggaaggaatccttgaatttttgtaggaatctatatcattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_65347478_65348601
seq2: B6Ng01-173C06.b_44_1170 (reverse)

seq1  AAAAAGCAAATATATA-CATATATATTTAGAGAGT-CAAACAGGCAGAAA  48
      |||| ||||||||||| ||||| |||||||||||| |||||| |||||||
seq2  AAAAGGCAAATATATACCATAT-TATTTAGAGAGTCCAAACA-GCAGAAA  48

seq1  CAGGCAGACACAGAGAGGGGGAAGGAAGAGAGAGAGAAAGAGAGAGAAAG  98
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAGGCAGACACAGAGAGGGGGAAAGAAGAGAGAGAGAAAGAGAGAGAAAG  98

seq1  GAGAGGGGAGGGAGGGAGATCATGACAATGACTTAGAAGCTCCA-TGTAA  147
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  GAGAGGGGAGGGAGGGAGATCATGACAATGACTTAG-AGCTCCATTGTAA  147

seq1  CAGGGTGGGTTTAGAACCTCCTTGAGTGAAAT-AAAATGTGAAAGTAAGA  196
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGGGTGGGTTTAGAACCTCCTTGAGTGAAATAAAAATGTGAAAGTAAGA  197

seq1  GTTTAAAAGATGGTTT-AAAACATCTCCCTCCATGTATAGATCCATAGT-  244
      |||||||||||||||| |||||||||||||||||||||||||||||||| 
seq2  GTTTAAAAGATGGTTTAAAAACATCTCCCTCCATGTATAGATCCATAGTA  247

seq1  AACAGTGTATTGGAATGTCTTAGAAATGCAGGCCCAAAAAAACCACTCAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGTATTGGAATGTCTTAGAAATGCAGGCCCAAAAAAACCACTCAG  297

seq1  ACCTCTTGCATAGTGATGGGAATCCTGAATGAGTGTATGTGAAAATCTTG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTGCATAGTGATGGGAATCCTGAATGAGTGTATGTGAAAATCTTG  347

seq1  AGACACATGACTTTGGGCAGCCATCTTGCCTCTGTATACTCACAGTATAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACATGACTTTGGGCAGCCATCTTGCCTCTGTATACTCACAGTATAT  397

seq1  GCAGGCTTATGGCAGCAGTCTTGAAGCCATGCTTCTCCTTTGTTGGCCTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTTATGGCAGCAGTCTTGAAGCCATGCTTCTCCTTTGTTGGCCTC  447

seq1  TGCTCTGACCAAAAGTGACACAAGGTAACAGGAAGCCAGAGCTAGTCATC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGACCAAAAGTGACACAAGGTAACAGGAAGCCAGAGCTAGTCATC  497

seq1  CAAAATACAATAGACAGGTTCCAACATCATACTTGGGAAGAAATCTTCCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATACAATAGACAGGTTCCAACATCATACTTGGGAAGAAATCTTCCT  547

seq1  GAGACTTTAGCAAAGAAGGTTAAATGTAAACTATCTTCTTTCTGTTATGA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTTAGCAAAGAAGGTTAAATGTAAACTATCTTCTTTCTGTTATGA  597

seq1  CCTGGAGTTCTCTAGAGTCAAGCATCAACATCATCAGCCTTCAATTCTGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGTTCTCTAGAGTCAAGCATCAACATCATCAGCCTTCAATTCTGA  647

seq1  TTATGCCTTCTCTCTTTTTGTGAAAGCAAGGCTTATATTATAGTCTATCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCCTTCTCTCTTTTTGTGAAAGCAAGGCTTATATTATAGTCTATCC  697

seq1  CCATGCTTCCTGGTGCTGCAGCCCTGTAGGACTGACCTCCATCACTTGCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTTCCTGGTGCTGCAGCCCTGTAGGACTGACCTCCATCACTTGCT  747

seq1  TAGAGTTGTATTGGTCCACTTAAATCTTGCTGCAGAAGTTCTTGTTCTCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTGTATTGGTCCACTTAAATCTTGCTGCAGAAGTTCTTGTTCTCC  797

seq1  TGACCTTTAATGCCAGTGCCCAGCTAGAGAGAGACATCCTTTTTTATTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTTAATGCCAGTGCCCAGCTAGAGAGAGACATCCTTTTTTATTCT  847

seq1  GTGGAATAGTAATCTTATACAATTTTCTTGTAAAGAATACTGTAATTAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATAGTAATCTTATACAATTTTCTTGTAAAGAATACTGTAATTAAA  897

seq1  CATTTATGATGAGCCTAAGGGATATTGCCCCCTTGAGTGGTTTGAATAGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATGATGAGCCTAAGGGATATTGCCCCCTTGAGTGGTTTGAATAGG  947

seq1  TATGTCCCCCATAGATTCATGTGATTGAATGCTTGGTCCGTGGAGAGTGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCCCCATAGATTCATGTGATTGAATGCTTGGTCCGTGGAGAGTGG  997

seq1  TACTATTATGAGGTGTGGTCTTTTGGGAGGAAGTGTGTCACTCTAGGGGC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTATGAGGTGTGGTCTTTTGGGAGGAAGTGTGTCACTCTAGGGGC  1047

seq1  AGGCTTTGAAGTCTCCTATGCTCAAACTCCACCCAGTGTAGAAGCTAGTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTGAAGTCTCCTATGCTCAAACTCCACCCAGTGTAGAAGCTAGTC  1097

seq1  TCCTAGTGGCTGCCTTGGGATATAGAATTC  1124
      ||||||||||||||||||||||||||||||
seq2  TCCTAGTGGCTGCCTTGGGATATAGAATTC  1127


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