BAC Information

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BAC

Clone NameB6Ng01-173N22
Chromosome7 (Build37)
Map Location 127,075,792 - 127,273,238
singlet/doubletdoublet
Overlap geneDnahc3, Tmem159
Upstream geneIqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1
Downstream geneZp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173N22.bB6Ng01-173N22.g
ACCGA002103GA002104
length949975
definitionB6Ng01-173N22.b B6Ng01-173N22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,272,294 - 127,273,238)(127,075,792 - 127,076,743)
sequence
gaattcatagatgcgatagatggttttcatatggctggatgaggcaggtt
agcaatcactaagtcctagtaaagaagaaacaggagacctgggctctgaa
gaagatatgacactgatagccaccatctaagtgctgcagggttacgagcc
aaggagcccaggtagcctctaacagaggaacaggtgaggaaccgtggtgg
agccttcagaatcagctctactgcccctgtttgcacttctgagtttgcct
ccagagtactaactactaagtttatgttcctgaagctgctaagggaaacc
aatccaccctctaatgactcatgacccacaaattagaaaaaaaaaatcac
tggaaatgctaacatgagttactcagaccttataatcacccaggatggca
cagtcccttaagctcttggtagaccctggccttcaagttggcccatgtgt
gttggcatcagatcttctgggcttctggatatctctacagcaaactccct
tctgaagtgtttgccacagtactaaagcagaacttgcctggagcagcagc
tcagatgaacacttgttgccatggtagcctggaacaagtacaaggagcaa
tagattcacgtcgggttctcaacttttgaaagtacacatcctacggtatg
tgggggaggcagcctattcagagagtaagtatgtgggcaaggaattgagc
tcaaaccccaagaggctgctctttcatccatactggggttgcgacctgcc
taactgggtagtgatgggttgtaatttgtaaaacaggtgtcagaaatagg
ataaaatgttcctttggtggtttctgacagtgaagggtgccggggctggg
aatggtgcttgtgtactgtagaaagaggtccccaacttttcttccctgac
ctgttctgtggctactatagtttacttgggtacacacaatacttcctgg
gaattccaggacagccaggactacatagagagactgtatctctaaataca
atcatacatacatacatgcatacatacatacatacatacatacatacata
catacatacaaaaacaaatttaaaaaagagttaggcaattatctgaaggg
gacagtaagcccagattgtacatgcgtgcatacatgcttgcacatgtgcc
tatacacacacacacacacacacacacacacacacacacacactcacaca
ctcatacatgcatgtacagggcacccagaaaagtgggttcatttctcata
tccgggaagggaaattagaatcaagttagagaggagggtaagtgcccaag
ttcgaggagcctcgttgcctaggaggtgaatctcaggcgggtaactaagc
taccagaaactcatactgagtaaggtgagcagtacaagagcagtttcact
ataagccaggtcatctggatttctgtaactctatgagcaacctcagacct
tcagcaaagttcagttggaacatactgcagatgatttctactataaggaa
gtttatataaacccctaaactacatgcagtattttttttgaaagtttcat
tttctttttttttattagacattttctttatttacatttcaaatgttatc
ccctttccgagtttcccctctgaaaatctcctattccctcctctccgccc
cacccccactccccaacccacccactcccattcctggccctgggtatttc
ccctatactggggcatagaaaccttcacaggacctagggccctctccctc
ccatttgatgacccgactaggccatcctctgctaacatatacagctagag
ccacaaagttctaccatgtggttttcctttggttggtttaagttcccaag
gagctttggggggtactgggttaagttcatatttgatggtcctccctggg
ggggccttcagaacccccttcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_127272294_127273238
seq2: B6Ng01-173N22.b_44_992 (reverse)

seq1  CCAGGAGATATTGTGTGTACCCAAGTAAACTATAGTAGCCACAGAACAGG  50
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAGTATTGTGTGTACCCAAGTAAACTATAGTAGCCACAGAACAGG  50

seq1  TCAGGGAAGGAAAGTTGGGGACCTCTTTCTACAGTACACAAGC-CCATTC  99
      ||||||||| ||||||||||||||||||||||||||||||||| ||||||
seq2  TCAGGGAAGAAAAGTTGGGGACCTCTTTCTACAGTACACAAGCACCATTC  100

seq1  CCAGCCCCGGCACCCTTCACTGTCAG-AACCACC-AAGGAACATTTTATC  147
      |||||||||||||||||||||||||| ||||||| |||||||||||||||
seq2  CCAGCCCCGGCACCCTTCACTGTCAGAAACCACCAAAGGAACATTTTATC  150

seq1  CTATTTCTGACACCTGTTTTAC-AATTACAACCCATCACTACCCAGTTAG  196
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTATTTCTGACACCTGTTTTACAAATTACAACCCATCACTACCCAGTTAG  200

seq1  GCAGGTCGCAACCCCAGTATGGATGAAAGAGCAGCCTCTTGGGGTTTGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCGCAACCCCAGTATGGATGAAAGAGCAGCCTCTTGGGGTTTGAG  250

seq1  CTCAATTCCTTGCCCACATACTTACTCTCTGAATAGGCTGCCTCCCCCAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATTCCTTGCCCACATACTTACTCTCTGAATAGGCTGCCTCCCCCAC  300

seq1  ATACCGTAGGATGTGTACTTTCAAAAGTTGAGAACCCGACGTGAATCTAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCGTAGGATGTGTACTTTCAAAAGTTGAGAACCCGACGTGAATCTAT  350

seq1  TGCTCCTTGTACTTGTTCCAGGCTACCATGGCAACAAGTGTTCATCTGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTGTACTTGTTCCAGGCTACCATGGCAACAAGTGTTCATCTGAG  400

seq1  CTGCTGCTCCAGGCAAGTTCTGCTTTAGTACTGTGGCAAACACTTCAGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCTCCAGGCAAGTTCTGCTTTAGTACTGTGGCAAACACTTCAGAA  450

seq1  GGGAGTTTGCTGTAGAGATATCCAGAAGCCCAGAAGATCTGATGCCAACA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTTGCTGTAGAGATATCCAGAAGCCCAGAAGATCTGATGCCAACA  500

seq1  CACATGGGCCAACTTGAAGGCCAGGGTCTACCAAGAGCTTAAGGGACTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGGCCAACTTGAAGGCCAGGGTCTACCAAGAGCTTAAGGGACTGT  550

seq1  GCCATCCTGGGTGATTATAAGGTCTGAGTAACTCATGTTAGCATTTCCAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCTGGGTGATTATAAGGTCTGAGTAACTCATGTTAGCATTTCCAG  600

seq1  TGATTTTTTTTTTCTAATTTGTGGGTCATGAGTCATTAGAGGGTGGATTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTTTTCTAATTTGTGGGTCATGAGTCATTAGAGGGTGGATTG  650

seq1  GTTTCCCTTAGCAGCTTCAGGAACATAAACTTAGTAGTTAGTACTCTGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCTTAGCAGCTTCAGGAACATAAACTTAGTAGTTAGTACTCTGGA  700

seq1  GGCAAACTCAGAAGTGCAAACAGGGGCAGTAGAGCTGATTCTGAAGGCTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACTCAGAAGTGCAAACAGGGGCAGTAGAGCTGATTCTGAAGGCTC  750

seq1  CACCACGGTTCCTCACCTGTTCCTCTGTTAGAGGCTACCTGGGCTCCTTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACGGTTCCTCACCTGTTCCTCTGTTAGAGGCTACCTGGGCTCCTTG  800

seq1  GCTCGTAACCCTGCAGCACTTAGATGGTGGCTATCAGTGTCATATCTTCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTAACCCTGCAGCACTTAGATGGTGGCTATCAGTGTCATATCTTCT  850

seq1  TCAGAGCCCAGGTCTCCTGTTTCTTCTTTACTAGGACTTAGTGATTGCTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCCCAGGTCTCCTGTTTCTTCTTTACTAGGACTTAGTGATTGCTA  900

seq1  ACCTGCCTCATCCAGCCATATGAAAACCATCTATCGCATCTATGAATTC  945
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTCATCCAGCCATATGAAAACCATCTATCGCATCTATGAATTC  949

seq1: chr7_127075792_127076743
seq2: B6Ng01-173N22.g_70_1044

seq1  GAATTCCAGGACAGCCAGGACTACATAGAGAGACTGTATCTCTAAATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGACTACATAGAGAGACTGTATCTCTAAATACA  50

seq1  ATCATACATACATACATGCATACATACATACATACATACATACATACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACATACATACATGCATACATACATACATACATACATACATACATA  100

seq1  CATACATACAAAAACAAATTTAAAAAAGAGTTAGGCAATTATCTGAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATACAAAAACAAATTTAAAAAAGAGTTAGGCAATTATCTGAAGGG  150

seq1  GACAGTAAGCCCAGATTGTACATGCGTGCATACATGCTTGCACATGTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTAAGCCCAGATTGTACATGCGTGCATACATGCTTGCACATGTGCC  200

seq1  TATACACACACACACACACACACACACACACACACACACACACTCACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACACACACACACACACACACACACACACACACACACACTCACACA  250

seq1  CTCATACATGCATGTACAGGGCACCCAGAAAAGTGGGTTCATTTCTCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATACATGCATGTACAGGGCACCCAGAAAAGTGGGTTCATTTCTCATA  300

seq1  TCCGGGAAGGGAAATTAGAATCAAGTTAGAGAGGAGGGTAAGTGCCCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGGAAGGGAAATTAGAATCAAGTTAGAGAGGAGGGTAAGTGCCCAAG  350

seq1  TTCGAGGAGCCTCGTTGCCTAGGAGGTGAATCTCAGGCGGGTAACTAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGGAGCCTCGTTGCCTAGGAGGTGAATCTCAGGCGGGTAACTAAGC  400

seq1  TACCAGAAACTCATACTGAGTAAGGTGAGCAGTACAAGAGCAGTTTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGAAACTCATACTGAGTAAGGTGAGCAGTACAAGAGCAGTTTCACT  450

seq1  ATAAGCCAGGTCATCTGGATTTCTGTAACTCTATGAGCAACCTCAGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCAGGTCATCTGGATTTCTGTAACTCTATGAGCAACCTCAGACCT  500

seq1  TCAGCAAAGTTCAGTTGGAACATACTGCAGATGATTTCTACTATAAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAAGTTCAGTTGGAACATACTGCAGATGATTTCTACTATAAGGAA  550

seq1  GTTTATATAAACCCCTAAACTACATGCAGTATTTTTTTTGAAAGTTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATAAACCCCTAAACTACATGCAGTATTTTTTTTGAAAGTTTCAT  600

seq1  TTTCTTTTTTTTTATTAGACATTTTCTTTATTTACATTTCAAATGTTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTTTTATTAGACATTTTCTTTATTTACATTTCAAATGTTATC  650

seq1  CCCTTTCCGAGTTTCCCCTCTGAAAATCTCCTATTCCCTCCTCTCCGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCGAGTTTCCCCTCTGAAAATCTCCTATTCCCTCCTCTCCGCCC  700

seq1  CACCCCCACTCCCCAACCCACCCACTCCCATTCCTGGCCCT-GGTA-TTC  748
      ||||||||||||||||||||||||||||||||||||||||| |||| |||
seq2  CACCCCCACTCCCCAACCCACCCACTCCCATTCCTGGCCCTGGGTATTTC  750

seq1  CCCTATACTGGGGCATAG-AACCTTCACAGGACCTAGGG-CCTCT-CCTC  795
      |||||||||||||||||| |||||||||||||||||||| ||||| ||||
seq2  CCCTATACTGGGGCATAGAAACCTTCACAGGACCTAGGGCCCTCTCCCTC  800

seq1  CCA-TTGATGA-CCGACTAGGCCATCCTCTGCT-ACATATACAGCTAGAG  842
      ||| ||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  CCATTTGATGACCCGACTAGGCCATCCTCTGCTAACATATACAGCTAGAG  850

seq1  CCAC-AAGTTCTACCATGTG--TTTTCTTTGG-TGGTTT-AGTT-CCAAG  886
      |||| |||||||||||||||  ||| |||||| |||||| |||| |||||
seq2  CCACAAAGTTCTACCATGTGGTTTTCCTTTGGTTGGTTTAAGTTCCCAAG  900

seq1  GAGCTCT-GGGGGTACTGG--TTAGTTCATA-TTGATGTTCCT-CCTGTG  931
      ||||| | |||||||||||  | |||||||| |||||| |||| |||| |
seq2  GAGCTTTGGGGGGTACTGGGTTAAGTTCATATTTGATGGTCCTCCCTGGG  950

seq1  GGG--CTTCAGA--CCCCTTCAGCT  952
      |||  |||||||  |||||||||||
seq2  GGGGCCTTCAGAACCCCCTTCAGCT  975