BAC Information

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BAC

Clone NameB6Ng01-176F06
Chromosome7 (Build37)
Map Location 86,864,225 - 87,048,979
singlet/doubletdoublet
Overlap genePlin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2
Upstream geneMrpl46, Mrps11, Det1, Isg20l1, Isg20, Acan, Hapln3, Mfge8, Abhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik
Downstream gene2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176F06.bB6Ng01-176F06.g
ACCGA003889GA003890
length2021,043
definitionB6Ng01-176F06.b B6Ng01-176F06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,864,225 - 86,864,426)(87,047,931 - 87,048,979)
sequence
gaattctgatagggtctggtgtatatgtggatatgtaaatgacaggtgtg
ccccgatagcttatgtgcatttctatggtgatcatcagtattgcaaatta
tacattgtttcatcaagaatgtcataggttacagtttgtacacacacata
tccatatatatgcataagattgtgtgtgtgagtgtgtgtgtgtgtgtgtg
tg
gaattcttttgtatgtagacattttgttaatttctttgcagtgttcttac
tttttatgtttcttgtacccgcactctgttgtccaggatctctagtgttg
tgcgggctaggcatggggtaaatggcatcaggtctgggtcgctggtttcc
aaagcacctcagctgttgccgtgaagcgcagcgtttgctgtgggtcttct
gtaaacatcctgtatcaggtgagggcttcttccttgttcttcctaatggc
tagggattgctggtcatgaaaggatgtcaggatttgtcagaagtccttcc
tctgcctcttgggtgcctttttgcctcatccttctaatgccattttaaac
atctgtgaggatgtctgctcagccagtaaacgattccatttattgggcat
ggcttttagaaggaagtaagtggccataaaaatgctgcccttcctttctc
gtgcatcttatcttcttgtcagttccataaagcaccttgctgctgcagca
gatttttttgctgttcatacaactgtttatttttagctgtgggttggcac
tgagaaatgactgctcatatctatttgttgttgaagttgatggtagaagg
agtcagaatcctgtcttagtcacccttagacttactgaaggtgtttccca
gagagcgactccactttccttgcatgtcagcctggctatctgcactctca
caaagtatttgccatctcaggtgtgccttgatagtcagctgttttgttta
acttacgtaggcaaaagacctatctgaaaacagcaagcttatcactggat
tcatgcttctaacggaagactctttcccttaacttgaggcccagcagcgc
ctggcggtggatctttgctggtcccggcagctgcttaattaagctgcccc
cttaatgctcatgaagcctagagcaccagcccacccagacacattgactg
aatttctataactttcaaatttccagtctggtgtttcttttgtacttgag
aaaagtcttcatgttagcctagctggcctggagcttccttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86864225_86864426
seq2: B6Ng01-176F06.b_42_243

seq1  GAATTCTGATAGGGTCTGGTGTATATGTGGATATGTAAATGACAGGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATAGGGTCTGGTGTATATGTGGATATGTAAATGACAGGTGTG  50

seq1  CCCCGATAGCTTATGTGCATTTCTATGGTGATCATCAGTATTGCAAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGATAGCTTATGTGCATTTCTATGGTGATCATCAGTATTGCAAATTA  100

seq1  TACATTGTTTCATCAAGAATGTCATAGGTTACAGTTTGTACACACACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGTTTCATCAAGAATGTCATAGGTTACAGTTTGTACACACACATA  150

seq1  TCCATATATATGCATAAGATTGTGTGTGTGAGTGTGTGTGTGTGTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATATATGCATAAGATTGTGTGTGTGAGTGTGTGTGTGTGTGTGTG  200

seq1  TG  202
      ||
seq2  TG  202

seq1: chr7_87047931_87048979
seq2: B6Ng01-176F06.g_66_1108 (reverse)

seq1  AGTAAGGAAGCTCCAGGCCAGCCTAGGCT-ACATGAGACCTTTTCTCAAA  49
      ||||||||||||||||||||| ||||||| ||||||   |||||||| ||
seq2  AGTAAGGAAGCTCCAGGCCAG-CTAGGCTAACATGAAGACTTTTCTC-AA  48

seq1  GTAACAAAAGAAACACCAAGACTGGAAAATTTTGAAAGTATTAGAAATTC  99
      || |||||||||||||| ||||||||||  |||||||||  |||||||||
seq2  GT-ACAAAAGAAACACC-AGACTGGAAA--TTTGAAAGTTATAGAAATTC  94

seq1  AGTCAAATGTGTCTGGGTGGGCCTGCTGCTCTAAGCTTCATGAGCATTAA  149
      |||| |||||||||||||||| ||| ||||||| ||||||||||||||||
seq2  AGTC-AATGTGTCTGGGTGGG-CTGGTGCTCTAGGCTTCATGAGCATTAA  142

seq1  GGGGGCAGCTTAATTAAGCAGCTGCCGGGACCAGC-AAGATCCACCGCCA  198
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGGGGCAGCTTAATTAAGCAGCTGCCGGGACCAGCAAAGATCCACCGCCA  192

seq1  GGCGCTGCT-GGCCTCAAGTTAAGGGAAAGAGTCTTCCGTTAAGAAGCAT  247
      ||||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  GGCGCTGCTGGGCCTCAAGTTAAGGGAAAGAGTCTTCCGTT-AGAAGCAT  241

seq1  GAATCCAGTGATAAGCTTGCTGTTTTCAGATAGGTCTTTTGCCTACGTAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAGTGATAAGCTTGCTGTTTTCAGATAGGTCTTTTGCCTACGTAA  291

seq1  GTTAAACAAAACAGCTGACTATCAAGGCACACCTGAGATGGCAAATACTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAACAAAACAGCTGACTATCAAGGCACACCTGAGATGGCAAATACTT  341

seq1  TGTGAGAGTGCAGATAGCCAGGCTGACATGCAAGGAAAGTGGAGTCGCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAGTGCAGATAGCCAGGCTGACATGCAAGGAAAGTGGAGTCGCTC  391

seq1  TCTGGGAAACACCTTCAGTAAGTCTAAGGGTGACTAAGACAGGATTCTGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAAACACCTTCAGTAAGTCTAAGGGTGACTAAGACAGGATTCTGA  441

seq1  CTCCTTCTACCATCAACTTCAACAACAAATAGATATGAGCAGTCATTTCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTACCATCAACTTCAACAACAAATAGATATGAGCAGTCATTTCT  491

seq1  CAGTGCCAACCCACAGCTAAAAATAAACAGTTGTATGAACAGCAAAAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCAACCCACAGCTAAAAATAAACAGTTGTATGAACAGCAAAAAAA  541

seq1  TCTGCTGCAGCAGCAAGGTGCTTTATGGAACTGACAAGAAGATAAGATGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCAGCAGCAAGGTGCTTTATGGAACTGACAAGAAGATAAGATGC  591

seq1  ACGAGAAAGGAAGGGCAGCATTTTTATGGCCACTTACTTCCTTCTAAAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAAAGGAAGGGCAGCATTTTTATGGCCACTTACTTCCTTCTAAAAG  641

seq1  CCATGCCCAATAAATGGAATCGTTTACTGGCTGAGCAGACATCCTCACAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCAATAAATGGAATCGTTTACTGGCTGAGCAGACATCCTCACAG  691

seq1  ATGTTTAAAATGGCATTAGAAGGATGAGGCAAAAAGGCACCCAAGAGGCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAAAATGGCATTAGAAGGATGAGGCAAAAAGGCACCCAAGAGGCA  741

seq1  GAGGAAGGACTTCTGACAAATCCTGACATCCTTTCATGACCAGCAATCCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGACTTCTGACAAATCCTGACATCCTTTCATGACCAGCAATCCC  791

seq1  TAGCCATTAGGAAGAACAAGGAAGAAGCCCTCACCTGATACAGGATGTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATTAGGAAGAACAAGGAAGAAGCCCTCACCTGATACAGGATGTTT  841

seq1  ACAGAAGACCCACAGCAAACGCTGCGCTTCACGGCAACAGCTGAGGTGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGACCCACAGCAAACGCTGCGCTTCACGGCAACAGCTGAGGTGCT  891

seq1  TTGGAAACCAGCGACCCAGACCTGATGCCATTTACCCCATGCCTAGCCCG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAACCAGCGACCCAGACCTGATGCCATTTACCCCATGCCTAGCCCG  941

seq1  CACAACACTAGAGATCCTGGACAACAGAGTGCGGGTACAAGAAACATAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACACTAGAGATCCTGGACAACAGAGTGCGGGTACAAGAAACATAAA  991

seq1  AAGTAAGAACACTGCAAAGAAATTAACAAAATGTCTACATACAAAAGAAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGAACACTGCAAAGAAATTAACAAAATGTCTACATACAAAAGAAT  1041

seq1  TC  1049
      ||
seq2  TC  1043