BAC Information

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BAC

Clone NameB6Ng01-177O05
Chromosome7 (Build37)
Map Location 15,473,222 - 15,474,333
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312
Downstream geneLOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762, Obox1, LOC100042765, Obox3, LOC100042771, Obox5, EG638338, Obox6, Crx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177O05.bB6Ng01-177O05.g
ACCGA005032GA005033
length1,0961,098
definitionB6Ng01-177O05.b B6Ng01-177O05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcttctcaattgagtgtatgacagcagtatgtgcattttgga
atgaatgaacacataagcctagaagaggtggaagaggctgtactggatgt
tctcaaagaagagaaacaaagaacaagaaagtgataactgaaatctgctc
tctgaactggtacccaagattttaattttctgattttgtggcacagtata
aagtagtatgggagagaagtagagatttattcaaatcacattttttattt
taaggataaagtataaataacacaataggagattacttcaactcattaat
tgactatagatgatagtgaaactagtgagttagtacacattttgaatctc
cacacttaggagaagaaagacataaggttaggccattctggggtcagcag
gcattgctgcaactggaagaccatattgatgtgagtggcttgtactttct
cctacgtcaatgtcaatggttctgcctgcctccgtgagccttgtcttgtt
ccatcattctcctcctgctgggggccaagtttctgctctgtgtttgctca
aggactcatgtggatgccaataatatatgctaccattgactatgaagagc
aacaaggatattattgttgtgatatcagtatctgcatccttacagttgag
agggaatgacattgaaattatctttgtaagcaataaccacatcccatccc
aatccatcccttaaaactaatgaactagacaggaattcaacaaaaaagaa
ctcttaaaatgtggtaggataatgaagtgtagctttccacaggtcatgag
ttctggcaagagtgttggagggccaacactctgttctatttaaggagcag
ttcatgaagactatgaccatgctccagtgagtatgtaggtgataaaaaaa
aactgacccaattctttttttttctgcatcctacatcctgtattcttgga
tagagctccattgagacttgaccaatgcttgagaagataattgctggtct
gagaattaatctactgctgcattcagaagaagctcacacagatggtctct
gaccatgagaagttgatctgagttagcatagttgaaaactgacagg
gaattctggacaaggtaaggctgttgatccaggtgggacccaggtctgct
ctgaaaaacaatggctttaacttcaaagataagagtcaaaccaaaagtcc
cctgcagtgaccattttacattaaaagtcggccactccacttggaggcac
aaaaatctgccaaggtcccttcttaatttctactgaaagattatgggccc
ttgatataacttcagtacagtggtctaaagtcaaacttaggggggtcttt
acagtctgccccatcatttacaccaccacgtaaaacacgaaacaaacaca
gaaaacacacatacacacactgacagatgcccattttctaacggactgtc
aaaaccaactcagaaatgcagaaggttggggaagtgcacaacccgcccca
gaaggactcctggagtccttacccttgctcagggggtcccacagagcgag
cagcatccagtgattccagcacgtctgctgttcacactcagtgcctcatc
ctgaggcaaaggtctccgtttctcatgaaacatagaggctgcaaatttca
acactgaacctcgcctgctcacagaaatatttttagacaaaaaatttcac
ctccaagtgggtcttcggagatgtgggtggtcacgagatcccagacgagc
ccccaaatgaaagattccgagtggagccccttgctcagatctcaggacaa
tagcagacacccaagaattcacaatggaccaagcttgatgcaaaccacgt
gaggctttattcagagaaatccagagctctggggacgactcatatcccac
acaggggtagatgagttgacctcgaggggaaagaaggtcccatttttata
gggcctcaggggagaatgagaggggaataggggattcctgatctaacatt
gtctatctcagaattggtattgagaaggttacatgaaaagtctggtacag
gtgaccactaggattgacgacctgtggttgctggagatttctgatctttc
agcaacgagatcaaacacctggcatgggctctctacgtgtcagatggact
aatattgtctaacttgcatccaggctaggaaggccagcattggacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15473222_15474333
seq2: B6Ng01-177O05.b_43_1138 (reverse)

seq1  CCTGCTCAGTTTTTCAACTCTTGCTAAAAACTCAGAATCCACCTTCTTCA  50
      |||| |||| |||||||||  ||||   ||||||||   || |||| |||
seq2  CCTG-TCAG-TTTTCAACT-ATGCT---AACTCAGA--TCAACTTC-TCA  41

seq1  TGTGTCAGAGACCATCTGTTGTGAGCCTTCTTCCTGAATGCAGCACTTAG  100
      || ||||||||||||||| |||||| |||||| ||||||||||||  |||
seq2  TG-GTCAGAGACCATCTG-TGTGAG-CTTCTT-CTGAATGCAGCA-GTAG  86

seq1  ATTAATTTCTCAGACCAGCAATGTATCTTCTCCAGCATTGGTCAAGTCTC  150
      ||||| |||||||||||||||| ||||||||| |||||||||||||||||
seq2  ATTAA-TTCTCAGACCAGCAAT-TATCTTCTCAAGCATTGGTCAAGTCTC  134

seq1  AATGGAGCTCTATCCAAAGAATACAGGATGTAGGATGCAGAAAAAAAAAG  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATGGAGCTCTATCC-AAGAATACAGGATGTAGGATGCAGAAAAAAAAAG  183

seq1  AATTGGGTCAG-TTTTTTTTATCACCTACATACTCACTGGAGCATGGTCA  249
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGTCAGTTTTTTTTTATCACCTACATACTCACTGGAGCATGGTCA  233

seq1  TAGTCTTCATGAACTGCTCCTTAAATAGAACAGAGTGTTGGCCCTCCAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTCATGAACTGCTCCTTAAATAGAACAGAGTGTTGGCCCTCCAAC  283

seq1  ACTCTTGCCAGAACTCATGACCTGTGGAAAGCTACACTTCATTATCCTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGCCAGAACTCATGACCTGTGGAAAGCTACACTTCATTATCCTAC  333

seq1  CACATTTTAAGAGTTCTTTTTTGTTGAATTCCTGTCTAGTTCATTAGTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTAAGAGTTCTTTTTTGTTGAATTCCTGTCTAGTTCATTAGTTT  383

seq1  TAAGGGATGGATTGGGATGGGATGTGGTTATTGCTTACAAAGATAATTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGATGGATTGGGATGGGATGTGGTTATTGCTTACAAAGATAATTTC  433

seq1  AATGTCATTCCCTCTCAACTGTAAGGATGCAGATACTGATATCACAACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATTCCCTCTCAACTGTAAGGATGCAGATACTGATATCACAACAA  483

seq1  TAATATCCTTGTTGCTCTTCATAGTCAATGGTAGCATATATTATTGGCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCCTTGTTGCTCTTCATAGTCAATGGTAGCATATATTATTGGCAT  533

seq1  CCACATGAGTCCTTGAGCAAACACAGAGCAGAAACTTGGCCCCCAGCAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGAGTCCTTGAGCAAACACAGAGCAGAAACTTGGCCCCCAGCAGG  583

seq1  AGGAGAATGATGGAACAAGACAAGGCTCACGGAGGCAGGCAGAACCATTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATGATGGAACAAGACAAGGCTCACGGAGGCAGGCAGAACCATTG  633

seq1  ACATTGACGTAGGAGAAAGTACAAGCCACTCACATCAATATGGTCTTCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGACGTAGGAGAAAGTACAAGCCACTCACATCAATATGGTCTTCCA  683

seq1  GTTGCAGCAATGCCTGCTGACCCCAGAATGGCCTAACCTTATGTCTTTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAGCAATGCCTGCTGACCCCAGAATGGCCTAACCTTATGTCTTTCT  733

seq1  TCTCCTAAGTGTGGAGATTCAAAATGTGTACTAACTCACTAGTTTCACTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAAGTGTGGAGATTCAAAATGTGTACTAACTCACTAGTTTCACTA  783

seq1  TCATCTATAGTCAATTAATGAGTTGAAGTAATCTCCTATTGTGTTATTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTATAGTCAATTAATGAGTTGAAGTAATCTCCTATTGTGTTATTTA  833

seq1  TACTTTATCCTTAAAATAAAAAATGTGATTTGAATAAATCTCTACTTCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATCCTTAAAATAAAAAATGTGATTTGAATAAATCTCTACTTCTC  883

seq1  TCCCATACTACTTTATACTGTGCCACAAAATCAGAAAATTAAAATCTTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATACTACTTTATACTGTGCCACAAAATCAGAAAATTAAAATCTTGG  933

seq1  GTACCAGTTCAGAGAGCAGATTTCAGTTATCACTTTCTTGTTCTTTGTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGTTCAGAGAGCAGATTTCAGTTATCACTTTCTTGTTCTTTGTTT  983

seq1  CTCTTCTTTGAGAACATCCAGTACAGCCTCTTCCACCTCTTCTAGGCTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTTGAGAACATCCAGTACAGCCTCTTCCACCTCTTCTAGGCTTA  1033

seq1  TGTGTTCATTCATTCCAAAATGCACATACTGCTGTCATACACTCAATTGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCATTCATTCCAAAATGCACATACTGCTGTCATACACTCAATTGA  1083

seq1  GAAGACAGAATTC  1112
      |||||||||||||
seq2  GAAGACAGAATTC  1096