BAC Information

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BAC

Clone NameB6Ng01-177P24
Chromosome7 (Build37)
Map Location 70,623,356 - 70,624,210
singlet/doubletsinglet
Overlap geneOtud7a
Upstream geneEG665038, LOC669222, LOC384631, LOC622243, EG622251, Chrna7
Downstream geneLOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177P24.bB6Ng01-177P24.g
ACCGA005114GA005115
length992942
definitionB6Ng01-177P24.b B6Ng01-177P24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacaaagagattgaagaaaaaaatctcagaaaaaatcagagaaa
gacaagtagaaagaatgaagcagaggacagactatcaggacttgaagata
aagtaaacaatctggaccaaactggcaaagaatgcaaaaacacaggaaag
gaatgtgaaggaaatgagggattccatccgatgatcaaacctttaaatta
caggcatagatgaggaagaagtacccctagctaatgacatacatcagatc
ttcaagaagattatatacaagaagcaaatagaaccccaactagatgagac
cagaaaaaaaaacctccaaaaagaagaaaagaaaaaaacctcctcacagc
ataccatagtcaaacatctaactatacagaacaaagaaaaaaaaccttga
agactgacagagaaaaaaaccaaatcacgtataaaggaaagttcatcaga
atattagctaatttctgattggaaactccaatagccagaaaaacctggag
taatgtactctaagttccaaaagaccacaactgtcaacctaaactactat
gtccagtaaaaccatgtgccatagttggaggagaaagaaacacaatccag
gtgtgaagaaaaaaaaatccaccactaccaccaccaccaccaccaccacc
actaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccag
atacccactaagcagaattattgggagcaatacttagaaccaaagagagg
aaaaagcataaccaagagactctagaaagaaaacagaaagtggatgctca
cagtcaactattggatggatcacagggtccccaatggaggagctagagaa
agtatccaaggagctaaacagatctgcacccctatcggtggaacaacatt
ataaactaaacaagtacccagagctcttgactctagctgcaatatgtatc
aaaagatgaacttagtcgggcatcactggaaagagaagggct
gaattctgaggacatttgaatctattctgggtcttaaaatgttcatgaat
tgtatgtgctccattttgatattgacctaaataggtcttattggttagac
tacacaaatgtatattttctagaaattggtctttgagtcattagaatgaa
tatcttcctgatttgctgatacagtagcaaagggaatgccaacagtaatt
gtgttgttacaataggagggaaacatccttataccaattctgtcaccttg
accaagaatatttctacagctttcagagataggcctagattgttccaagt
gaagacgatttattttataaatatttcctgtttccttttgtccttttaaa
aggatcaagaatgctacctttcagccattgagaagattactgacataaaa
actaggaaataaatgctggcaaggatgtgactttggaagctttaaccttg
tggatagggtatggaatggtacagtttctggttgaaactttatgttactc
tagaaaattaaacgtggtttcagtatcattgaagacatccactgttggga
tggccctaaaaggattagaaattgactcaaacagacatttgcacatccag
gctcctagctacaccattcctatcagcaatatggcagccagcatccaagg
gttccatggtggataagaacatagacacaagtgctgcaggcatacaacag
actgacagtcagacttaaataggaaggggcttctgacacatactgcagtg
ctgagaaacaaaccttgagtatatatctttataggaaaagtaaggcagtc
caaaacaaacccagacaaataagtgagatgcttccatgtagtcataagtt
atagaggcagaaaatcaatggaaatcatgggggataatggggtgttagcg
tctaaggtggcccagggtttccttttttcaatgatgagagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70623356_70624210
seq2: B6Ng01-177P24.g_69_924

seq1  GAATTCTGAGGACATTTGAATCTATTCTGGGTCTTAAAATGTTCATGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGGACATTTGAATCTATTCTGGGTCTTAAAATGTTCATGAAT  50

seq1  TGTATGTGCTCCATTTTGATATTGACCTAAATAGGTCTTATTGGTTAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGCTCCATTTTGATATTGACCTAAATAGGTCTTATTGGTTAGAC  100

seq1  TACACAAATGTATATTTTCTAGAAATTGGTCTTTGAGTCATTAGAATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAATGTATATTTTCTAGAAATTGGTCTTTGAGTCATTAGAATGAA  150

seq1  TATCTTCCTGATTTGCTGATACAGTAGCAAAGGGAATGCCAACAGTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCTGATTTGCTGATACAGTAGCAAAGGGAATGCCAACAGTAATT  200

seq1  GTGTTGTTACAATAGGAGGGAAACATCCTTATACCAATTCTGTCACCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTTACAATAGGAGGGAAACATCCTTATACCAATTCTGTCACCTTG  250

seq1  ACCAAGAATATTTCTACAGCTTTCAGAGATAGGCCTAGATTGTTCCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAATATTTCTACAGCTTTCAGAGATAGGCCTAGATTGTTCCAAGT  300

seq1  GAAGACGATTTATTTTATAAATATTTCCTGTTTCCTTTTGTCCTTTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACGATTTATTTTATAAATATTTCCTGTTTCCTTTTGTCCTTTTAAA  350

seq1  AGGATCAAGAATGCTACCTTTCAGCCATTGAGAAGATTACTGACATAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCAAGAATGCTACCTTTCAGCCATTGAGAAGATTACTGACATAAAA  400

seq1  ACTAGGAAATAAATGCTGGCAAGGATGTGACTTTGGAAGCTTTAACCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGAAATAAATGCTGGCAAGGATGTGACTTTGGAAGCTTTAACCTTG  450

seq1  TGGATAGGGTATGGAATGGTACAGTTTCTGGTTGAAACTTTATGTTACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGGGTATGGAATGGTACAGTTTCTGGTTGAAACTTTATGTTACTC  500

seq1  TAGAAAATTAAACGTGGTTTCAGTATCATTGAAGACATCCACTGTTGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATTAAACGTGGTTTCAGTATCATTGAAGACATCCACTGTTGGGA  550

seq1  TGGCCCTAAAAGGATTAGAAATTGACTCAAACAGACATTTGCACATCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTAAAAGGATTAGAAATTGACTCAAACAGACATTTGCACATCCAG  600

seq1  GCTCCTAGCTACACCATTCCTATCAGCAATATGGCAGCCAGCATCCAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTAGCTACACCATTCCTATCAGCAATATGGCAGCCAGCATCCAAGG  650

seq1  GTTCCATGGTGGATAAGAACATAGACACAAGTGCTGCAGGCATACAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATGGTGGATAAGAACATAGACACAAGTGCTGCAGGCATACAACAG  700

seq1  ACTGACAGTCAGACTTAAATAGGAAGGGGCTTCTGACACATACTGCAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAGTCAGACTTAAATAGGAAGGGGCTTCTGACACATACTGCAGTG  750

seq1  CTGAGAAACAAACCTTGAGTATATATCTTTATAGGAAAAGTAAGGCAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAACAAACCTTGAGTATATATCTTTATAGGAAAAGTAAGGCAGTC  800

seq1  CAAAACAAACCCAGACAAATAAGTGAGATGCTT-CATGTAGTCATAAGTT  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAAAACAAACCCAGACAAATAAGTGAGATGCTTCCATGTAGTCATAAGTT  850

seq1  ATAGAG  855
      ||||||
seq2  ATAGAG  856