BAC Information

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BAC

Clone NameB6Ng01-178A01
Chromosome7 (Build37)
Map Location 127,835,002 - 127,835,639
singlet/doubletsinglet
Overlap geneBC030336
Upstream geneBC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik
Downstream geneE030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa, LOC668556, Hs3st2, Usp31
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178A01.g
ACCGA005116
length1,152
definitionB6Ng01-178A01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttagtatgcatatagttttactgcataacactgtataacaaag
acaaagcaaatttatatattgatgagaaggataggcttctttaatttaca
taaaggttcagtctcagctgaatatttgctactgcaaggcatagagcatc
atcaacatttttcagctgatcaatattttgatttgatgattgtcagtgct
gagaatgctacttcacataaatacatagtacaaaatagcagaaatcgatt
taaggccatgtcaggaatggcgggcagttctgtcctaatcccaagccaaa
atcatttaatgaattttctttaatgaaactgaagtcagcacctcaaaata
gtttttaaaaatcaaacattcttgcacagtataatcaaaagataacttaa
tttgataaatgctaaagaatgctaacaggaaaacactacaataaaaactg
tagttcacaacctagaggagtctcaggcctgagctggggtgtctcaggca
gtgttcttttgctttacatggaaagcctgcattcagttcactgcaaaatg
caagtgtgtgtagagccaagggtgcagtgagttcacacagcacacgggcc
agcaggggtagaaacgtctcagctttgttatggcgattttgcattggttt
ctgtttacttcattttcagaaaccttttactgctggtcattggtgccata
gatttaactccagctcttaagaggcagaggcaggtggatcttagtcaggt
ctacagagggagttccaggacagcagacttccagagaaaccctgtcttgg
aaaaaactaaaaaaaaaaagaaaggggtgggggactgtagagatggctca
gaagttaagagtacttactgactgctcttccagaggtcctgagttcaatt
cccagcaaccacatggtggctcacaaccatctgtaatgggatctgatgcc
tcttcttggtgtgtctgagacacctacaatgcactcatataatgaaaagg
aaagaaattgtctgagttggggcttcattgtactgcagagcctgttgtag
aagactgctactacagaaggtggtatttttttggaatccttttgtcttaa
ggcaatatcccattaagcataccaccaagctcagcagtaagtcttgctgc
ca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_127835002_127835639
seq2: B6Ng01-178A01.g_586_1214

seq1  AGCCTGCATTCAGTTCACTGCAAAATGCAAGTGTGTGTAGAGCCAAGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCATTCAGTTCACTGCAAAATGCAAGTGTGTGTAGAGCCAAGGGT  50

seq1  GCAGTGAGTTCACACAGCACACGGGCCAGCAGGGGTAGAAACGTCTCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGAGTTCACACAGCACACGGGCCAGCAGGGGTAGAAACGTCTCAGC  100

seq1  TTTGTTATGGCGATTTTGCATTGGTTTCTGTTTACTTCATTTTCAGAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTATGGCGATTTTGCATTGGTTTCTGTTTACTTCATTTTCAGAAAC  150

seq1  CTTTTACTGCTGGTCATTGGTGCCATAGATTTAACTCCAGCTCTTAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACTGCTGGTCATTGGTGCCATAGATTTAACTCCAGCTCTTAAGAG  200

seq1  GCAGAGGCAGGTGGATCTTAGTCAGGTCTACAGAGGGAGTTCCAGGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGTGGATCTTAGTCAGGTCTACAGAGGGAGTTCCAGGACAG  250

seq1  CAGACTTCCAGAGAAACCCTGTCTTGGAAAAAACTAAAAAAAAAA--GAA  298
      |||||||||||||||||||||||||||||||||||||||||||||   ||
seq2  CAGACTTCCAGAGAAACCCTGTCTTGGAAAAAACTAAAAAAAAAAAGAAA  300

seq1  GGGGTGGGGGACTGTAGAGATGGCTCAGAAGTTAAGAGTACTTACTGACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGGACTGTAGAGATGGCTCAGAAGTTAAGAGTACTTACTGACT  350

seq1  GCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCA  400

seq1  CAACCATCTGTAATGGGATCTGATGCCCTCTTC-TGGTGTGTCTGAAGAC  447
      ||||||||||||||||||||||||| ||||||| ||||||||||| ||||
seq2  CAACCATCTGTAATGGGATCTGATG-CCTCTTCTTGGTGTGTCTG-AGAC  448

seq1  ACCTACAATGCACTCATATAAATGAAAA-GAAAGAAA-TGTCTGAGTTTG  495
      ||||||||||||||||||| |||||||| |||||||| |||||||||| |
seq2  ACCTACAATGCACTCATAT-AATGAAAAGGAAAGAAATTGTCTGAGTTGG  497

seq1  GGCTTTCATTGTACTGCAGAG-CTGTTGTAGGAGGACTGCTACCTACAGA  544
      ||| ||||||||||||||||| |||||||| || |||||||| |||||||
seq2  GGC-TTCATTGTACTGCAGAGCCTGTTGTA-GAAGACTGCTA-CTACAGA  544

seq1  GGTTGGTATTTTTTTGAAATTCTTTTTGTCCTTAGGCAATATCCCATTAA  594
       | ||||||||||||| || || ||||||| | |||||||||||||||||
seq2  AGGTGGTATTTTTTTGGAA-TCCTTTTGTCTTAAGGCAATATCCCATTAA  593

seq1  GGGAATACAACCAAAAGCTCAGCAGGTAAAGGCTCTTGCTGCCA  638
        | |||| |||  |||||||||| ||||    |||||||||||
seq2  --GCATACCACC--AAGCTCAGCA-GTAA---GTCTTGCTGCCA  629