BAC Information

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BAC

Clone NameB6Ng01-178I09
Chromosome7 (Build37)
Map Location 12,037,072 - 12,037,745
singlet/doubletsinglet
Overlap genenone
Upstream geneZik1, EG628580, V1re9, V1rl1, EG628596, Nlrp4b, LOC333184, V1re13, BQ559217, LOC637237, LOC236479, EG665879, Zscan4b, LOC665793, EG665798, Gm397, Zscan4-ps1, LOC635187, LOC100042997, LOC100042293, Zscan4d, LOC628737, LOC676750, LOC672893, LOC546931, LOC675762, Zscan4e, LOC665857, LOC665861, Zscan4f, LOC673742, LOC665887
Downstream geneLOC637541, LOC100042361, Zscan4-ps2, LOC675782, LOC100042386, LOC665926, LOC637571, LOC100043042, LOC628853, V1rg1, V1rg2, EG628898, V1rg5, V1rg6, LOC665999, V1rg4, LOC100042423, LOC628946, LOC100043075, LOC100042433, V1rg7, LOC100042437, V1rg3, LOC100042446, LOC100043092, V1rg9, V1rg12, V1rg8, V1rg11, Zfp551, EG666065
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178I09.bB6Ng01-178I09.g
ACCGA005487GA005488
length1,1071,201
definitionB6Ng01-178I09.b B6Ng01-178I09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattggtcttaccatgttccccatcatcctgaagcagctggtctg
atagaaagatggaatggccttttgaagatgaagttacagcaccaattagg
tggtaacagcatggaaggctgggacatagttcttcagaaggcagtatatg
ctttgaatcagtgtctgatatatggtacagtttcccccatagccaggatc
catgggtccaggaatcaggggtggaaaagggaatagttccacttactatc
actcctagtgaccctctaggaaaatttttgcttcctttccccataatttt
aggttctactggcctagaagttttggctccagacaggggagtgctcctac
caggagctacaacaatcattccattgaactggaatctcagacttcaccct
ggttattttgggcttctaatgcccttaaaccaacaggctaaaaaaggagt
aacagtgttaggaggggtgatagatccagattaccatggggaaattggat
tacctcttcacaatggaggtaagcaagattatgtctggagtgtaggagat
cccttagggtgtctcttagtactaccatgtcctgtgattaaagtcaatgg
gaaactacaacagcctaatccaagtaggatgtcaaaggacacagacccat
caggaatgaaggtatgggtcaatcctccaggaagtgagccaagacctgct
gagttgctggctgaaggtgaaggaaattcagaatgggtagtagaggaaca
tccctccatggcctctgcatcagctcctgcttcctgacctgcttgagttc
cagtcctgacttcctttggtcatacagcagtatggaagtgtaagctgaat
aaaccctttcctccccaactgcttcttggttatgatgtttgtgcaggaat
agaaaccctgactaagacaccactcaattgccatgttcagctggtttctt
cttggcttgttaggtgggcaccctgcagattcctggctactttgtactct
cctccaccagagaaagagaactagtggttcaactgtcttatactgactat
tgacagtgacattttgaaataaagacgagttcctacaaaagaaaaaatat
aagaaag
gaattccagttttatgtttgatgccaaattctttacaaaatgaagtaaaa
tttttgctagaataggatggcccattatctgtctaaataagtttaggcaa
tcccatggcattaaacgcttgtaggcaatgatcaattacatttttggagg
cttctccaatatgcatagaagtaaaaagaaatcctgaacaagttccaata
caaatatatatatacatattttaaatttatcaaattctgcataatgagtt
acatccatttgccaaatatgattaggcataagacctcatagattaactcc
taaatgtgacactggagataatgtaatacatttaggacattgtttgataa
tcattcttgcctgctccttagtgatcttatgttggagccttaaggtgtgg
ttagagagatgaaatttttcatgatcatgtttgaccaaagcaacaggatc
tgaatttaaggtttttttgtttttgttttttttttttctattagagctct
gtcgatgcaatcatagccttcagctaaaggtccaggaagaccaaaatgag
atcgtatgtggccaacatagaatgaatttttgggggcaagaatgatgttt
tccaattgtgaaaacagggatcatgctggtatattaaaattgaacgtacc
acaggtctccaataagggtaccaattgtgcaacatataaattatcagtaa
atatattaaaagcctcattcacagactgaaagacattcagtactgctgtt
aattctgctaattgagctgaaaggtcaggcgtctttatgattacctgttg
attatttaaaagaaatccagatcgccctttagaggcgccatcagtaaaca
ccagaacagcattctgtatgggttgtaaagaggtcatattaggaaatatc
acctcatgtacattaaaaattttatcaacctatcttggagggtagtggct
gtctatagttccttcaagctaattgagcagcaaccaatctgttactgtgc
tgtttagccagtgtctgactaagctgtgaggcaaaaataaacatctgctc
ttggccaaataggttgtgctgcttcttccagatatcatctgactactact
tcaaatatgcaagatattatgttagagaattcctcaatgtaccattaaga
acttttccatacaaatctgtaggacatagtgaaatcgcatttaacagatg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_12037072_12037745
seq2: B6Ng01-178I09.b_478_1149

seq1  GGCTAAAAAAGGAATAACAGTGTTAGGAGGGGTGATAGATCCAGATT-TC  49
      ||||||||||||| |||||||||||||||||||||||||||||||||  |
seq2  GGCTAAAAAAGGAGTAACAGTGTTAGGAGGGGTGATAGATCCAGATTACC  50

seq1  ATGGGGAAATTGGATTACCTCTTCACAATGGAGGTAAGCAAGATTATGTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGAAATTGGATTACCTCTTCACAATGGAGGTAAGCAAGATTATGTC  100

seq1  TGGAGTGTAGGAGATCCCTTAGGGTGTCTCTTAGTACTACCATGTCCTGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGTAGGAGATCCCTTAGGGTGTCTCTTAGTACTACCATGTCCTGT  150

seq1  GATTAAAGTCAAAGGGAAACTACAACAGCCTAATCCAAGTAGGATGTCAA  199
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGTCAATGGGAAACTACAACAGCCTAATCCAAGTAGGATGTCAA  200

seq1  AGGACACAGACCCATCAGGAATGAAGGTATGGGTCAATCCTCCAGGAAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGGACACAGACCCATCAGGAATGAAGGTATGGGTCAATCCTCCAGGAAGT  250

seq1  GATCCAAGACCTGCTGAGGTGCTGGCTGAAGGTGAAGGAAATTCAGAATG  299
      || ||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAGCCAAGACCTGCTGAGTTGCTGGCTGAAGGTGAAGGAAATTCAGAATG  300

seq1  GGTAGTAGAGGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTAGAGGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCT  350

seq1  GACCTGCTTGAGTTCCAGTTCTGACTTCCTTTGGTCATACAGCAGTATGG  399
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTCATACAGCAGTATGG  400

seq1  AAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTGCTTCTTGGTTATGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTGCTTCTTGGTTATGA  450

seq1  TGTTTGTGCAGGAATAAAAACCCTGACTAAGACACCACCCAATTGCCACA  499
      |||||||||||||||| ||||||||||||||||||||| |||||||||  
seq2  TGTTTGTGCAGGAATAGAAACCCTGACTAAGACACCACTCAATTGCCATG  500

seq1  TTCAGCTGGTTTCTTCTCAGCCTGAGAGTTGGGCACCCTGCAGACTCCTG  549
      |||||||||||||||||  || ||  || ||||||||||||||| |||||
seq2  TTCAGCTGGTTTCTTCTTGGCTTGTTAGGTGGGCACCCTGCAGATTCCTG  550

seq1  GCTAGTTTGTACTCTCCTCCAACCAAAGAAAGAGAACTCCGTTGTGCAAC  599
      |||| ||||||||||||||| |||| ||||||||||||  || || ||||
seq2  GCTACTTTGTACTCTCCTCC-ACCAGAGAAAGAGAACT-AGTGGTTCAAC  598

seq1  TGTTTTAATACTGAATATTGACAAGTGACAATTTGAAATAAAGAACCAGT  649
      ||| || ||||||| ||||||| ||||||| |||||||||||| || |||
seq2  TGTCTT-ATACTGACTATTGAC-AGTGACATTTTGAAATAAAG-ACGAGT  645

seq1  CCCTACAAA--AAAAAAAAAAAGAAAG  674
       ||||||||  |||||| | |||||||
seq2  TCCTACAAAAGAAAAAATATAAGAAAG  672