BAC Information

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BAC

Clone NameB6Ng01-179C20
Chromosome7 (Build37)
Map Location 98,565,761 - 98,707,954
singlet/doubletdoublet
Overlap geneDlg2
Upstream geneCcdc89, Crebzf, Tmem126a, Tmem126b, B230218P12Rik, LOC666689, LOC621816, LOC100039943
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179C20.bB6Ng01-179C20.g
ACCGA005970GA005971
length8551,141
definitionB6Ng01-179C20.b B6Ng01-179C20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,707,104 - 98,707,954)(98,565,761 - 98,566,907)
sequence
gaattctccccactagaactgtgagaggttaatatattaacctaggttat
tgtattttctcagtttctggaactacatgaaatgtcccattatcatgcat
gtgtatttcataaaacagtctgagatcagcagaactagtttgaaacttct
ttaagagacatacattctcatccccatgcaatactgaccaaacttaaaaa
gaaactgtttcaaaggccttaggtaatttgcaccaacactctccctagag
gagactataaaatgtcgtagcctctactttactcttcttctttctaatac
atctcagttttcaactagaagaaaaatttccaaattttaaatgtgatact
ctcctttctctcattcactcactggtgcctcattaactaaataaaaccca
aacgttgagaaataattagatagcaagctaaaactttcacctactgcccc
agatgactttcccatcatttcccaggttctcacagtcatgatttacccag
gctgacatcagccccctgctgctccatcaaaggcccaaacttaaaatctg
tgcatatcctagtgaatccctattcttagaataagtatatcacctcctct
gcttgccaggccctttcttatccccttacctaggttccttctggttccac
cctgtcctcactacttctgtcttcatgcctggaaatcccattgaatacat
aggacctctgttgtacaacagatgtaatgactatatttgaattgtgatat
catctggtcatctattagaaagatttctgtcttaatagcctaagaacttc
acattttgaaagggaaattggacaaatttataccgtgggggggggggggg
gactg

gaattcttttcatagagaggagaaataatacaggaggtgtgaagggaata
atatctaccatgtgtatctggggagccagaaataaataacatttataata
aaatgttaattgtggaacactcataactgatatatactattaatcaaata
atttaaaaatacaaaaggaaacgtgttaagattaaataaaagattagaat
aggcatcattgagaaagcagaatcagagaccagagcaaagcagaaagaaa
accagctctgttaagggcttcaagaagagagcatccacaatattggctta
tgtcttttctggagtgtaaatagtacagagtagatcagtggcaggttggc
tgaaggagccttgccttggggatctttcattgtggtcccaggtgcatacc
actgtggcttctttagacaattatggtcctgtgatcattataaacagaaa
ccaaatttccaaaagagagagttagaggtttacagtcactctgcaattat
ataaaaatgaaagcaaaatagctttttaaacttataaaatatgactttta
gaatgtatgttgataaaaccttttacaaggaggaaaaaatgaaacaggta
actattgccacagtgaaggattactttaatttccttttggtggctttgtt
tcccttttatgtgtttggtatgtatgcatgtgtgcattcacttccacaca
cctacctatgctcatacatgtatatgcagatacacaagtacttgtgtata
cgtggtgcatatgaaggctggataatgacttctacaggattcctcaatca
atttctgacttatatattgaaacacaatttctcaatcagaaccagaagta
tctctgataccactagtctaactagatagattcccatttaaccactagtc
tcactagatagattcccatttaaccactagtctaactagatagattccca
tttaaccactagtctaactagatagattcccatttaaccactagtctact
agatagatttccatttaaccactagtctcacttagatagattcccatttt
tctgcttctggcactgggctgacctcatgcttaccagccatttacctgga
tattgaattgaacttctgtcaagtctcatggctatgtttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_98707104_98707954
seq2: B6Ng01-179C20.b_41_895 (reverse)

seq1  CAGT---CCCCCCCCCCCCACGGTAT-AATTTGTCCAATTTCCCTTTCAA  46
      ||||   ||||||||||||||||||| |||||||||||||||||||||||
seq2  CAGTCCCCCCCCCCCCCCCACGGTATAAATTTGTCCAATTTCCCTTTCAA  50

seq1  AATGTGAAGTTCTTAGGCTATTAAGACAGAAATCTTTCTAATAGATGACC  96
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAAGTTCTTAGGCTATTAAGACAGAAATCTTTCTAATAGATGACC  100

seq1  AGATGATATCACAATTCAAATATAGTCATTACATCTGTTGTACAACAGAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATATCACAATTCAAATATAGTCATTACATCTGTTGTACAACAGAG  150

seq1  GTCCTATGTATTCAATGGGATTTCCAGGCATGAAGACAGAAGTAGTGAGG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTATGTATTCAATGGGATTTCCAGGCATGAAGACAGAAGTAGTGAGG  200

seq1  ACAGGGTGGAACCAGAAGGAACCTAGGTAAGGGGATAAGAAAGGGCCTGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTGGAACCAGAAGGAACCTAGGTAAGGGGATAAGAAAGGGCCTGG  250

seq1  CAAGCAGAGGAGGTGATATACTTATTCTAAGAATAGGGATTCACTAGGAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGAGGAGGTGATATACTTATTCTAAGAATAGGGATTCACTAGGAT  300

seq1  ATGCACAGATTTTAAGTTTGGGCCTTTGATGGAGCAGCAGGGGGCTGATG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAGATTTTAAGTTTGGGCCTTTGATGGAGCAGCAGGGGGCTGATG  350

seq1  TCAGCCTGGGTAAATCATGACTGTGAGAACCTGGGAAATGATGGGAAAGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTGGGTAAATCATGACTGTGAGAACCTGGGAAATGATGGGAAAGT  400

seq1  CATCTGGGGCAGTAGGTGAAAGTTTTAGCTTGCTATCTAATTATTTCTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGGGCAGTAGGTGAAAGTTTTAGCTTGCTATCTAATTATTTCTCA  450

seq1  ACGTTTGGGTTTTATTTAGTTAATGAGGCACCAGTGAGTGAATGAGAGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTGGGTTTTATTTAGTTAATGAGGCACCAGTGAGTGAATGAGAGAA  500

seq1  AGGAGAGTATCACATTTAAAATTTGGAAATTTTTCTTCTAGTTGAAAACT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGTATCACATTTAAAATTTGGAAATTTTTCTTCTAGTTGAAAACT  550

seq1  GAGATGTATTAGAAAGAAGAAGAGTAAAGTAGAGGCTACGACATTTTATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTATTAGAAAGAAGAAGAGTAAAGTAGAGGCTACGACATTTTATA  600

seq1  GTCTCCTCTAGGGAGAGTGTTGGTGCAAATTACCTAAGGCCTTTGAAACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTCTAGGGAGAGTGTTGGTGCAAATTACCTAAGGCCTTTGAAACA  650

seq1  GTTTCTTTTTAAGTTTGGTCAGTATTGCATGGGGATGAGAATGTATGTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTTAAGTTTGGTCAGTATTGCATGGGGATGAGAATGTATGTCT  700

seq1  CTTAAAGAAGTTTCAAACTAGTTCTGCTGATCTCAGACTGTTTTATGAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGAAGTTTCAAACTAGTTCTGCTGATCTCAGACTGTTTTATGAAA  750

seq1  TACACATGCATGATAATGGGACATTTCATGTAGTTCCAGAAACTGAGAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATGCATGATAATGGGACATTTCATGTAGTTCCAGAAACTGAGAAA  800

seq1  ATACAATAACCTAGGTTAATATATTAACCTCTCACAGTTCTAGTGGGGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATAACCTAGGTTAATATATTAACCTCTCACAGTTCTAGTGGGGAG  850

seq1  AATTC  851
      |||||
seq2  AATTC  855


seq1: chr7_98565761_98566907
seq2: B6Ng01-179C20.g_63_1203

seq1  GAATTCTTTTCATAGAGAGGAGAAATAATACAGGAGGTGTGAAGGGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCATAGAGAGGAGAAATAATACAGGAGGTGTGAAGGGAATA  50

seq1  ATATCTACCATGTGTATCTGGGGAGCCAGAAATAAATAACATTTATAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTACCATGTGTATCTGGGGAGCCAGAAATAAATAACATTTATAATA  100

seq1  AAATGTTAATTGTGGAACACTCATAACTGATATATACTATTAATCAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTAATTGTGGAACACTCATAACTGATATATACTATTAATCAAATA  150

seq1  ATTTAAAAATACAAAAGGAAACGTGTTAAGATTAAATAAAAGATTAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAATACAAAAGGAAACGTGTTAAGATTAAATAAAAGATTAGAAT  200

seq1  AGGCATCATTGAGAAAGCAGAATCAGAGACCAGAGCAAAGCAGAAAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCATTGAGAAAGCAGAATCAGAGACCAGAGCAAAGCAGAAAGAAA  250

seq1  ACCAGCTCTGTTAAGGGCTTCAAGAAGAGAGCATCCACAATATTGGCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTCTGTTAAGGGCTTCAAGAAGAGAGCATCCACAATATTGGCTTA  300

seq1  TGTCTTTTCTGGAGTGTAAATAGTACAGAGTAGATCAGTGGCAGGTTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTCTGGAGTGTAAATAGTACAGAGTAGATCAGTGGCAGGTTGGC  350

seq1  TGAAGGAGCCTTGCCTTGGGGATCTTTCATTGTGGTCCCAGGTGCATACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAGCCTTGCCTTGGGGATCTTTCATTGTGGTCCCAGGTGCATACC  400

seq1  ACTGTGGCTTCTTTAGACAATTATGGTCCTGTGATCATTATAAACAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGCTTCTTTAGACAATTATGGTCCTGTGATCATTATAAACAGAAA  450

seq1  CCAAATTTCCAAAAGAGAGAGTTAGAGGTTTACAGTCACTCTGCAATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTCCAAAAGAGAGAGTTAGAGGTTTACAGTCACTCTGCAATTAT  500

seq1  ATAAAAATGAAAGCAAAATAGCTTTTTAAACTTATAAAATATGACTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATGAAAGCAAAATAGCTTTTTAAACTTATAAAATATGACTTTTA  550

seq1  GAATGTATGTTGATAAAACCTTTTACAAGGAGGAAAAAATGAAACAGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTATGTTGATAAAACCTTTTACAAGGAGGAAAAAATGAAACAGGTA  600

seq1  ACTATTGCCACAGTGAAGGATTACTTTAATTTCCTTTTGGTGGCTTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGCCACAGTGAAGGATTACTTTAATTTCCTTTTGGTGGCTTTGTT  650

seq1  TCCCTTTTATGTGTTTGGTATGTATGCATGTGTGCATTCACTTCCACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTTATGTGTTTGGTATGTATGCATGTGTGCATTCACTTCCACACA  700

seq1  CCTACCTATGCTCATACATGTATATGCAGATACACAAGTACTTGTGTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTATGCTCATACATGTATATGCAGATACACAAGTACTTGTGTATA  750

seq1  CGTGGTGCATATGAAGGCTGGATAATGACTTCTACAGGATTCCTCAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTGCATATGAAGGCTGGATAATGACTTCTACAGGATTCCTCAATCA  800

seq1  ATTTCTGACTTATATATTGAAACACAATTTCTCAATCAGAACCAGAAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGACTTATATATTGAAACACAATTTCTCAATCAGAACCAGAAGTA  850

seq1  TCTCTGATACCACTAGTCTAACTAGATAGATTCCCATTTAACCACTAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGATACCACTAGTCTAACTAGATAGATTCCCATTTAACCACTAGTC  900

seq1  TCACTAGATAGATTCCCATTTAACCACTAGTCTAACTAGATAGATTCCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGATAGATTCCCATTTAACCACTAGTCTAACTAGATAGATTCCCA  950

seq1  TTTAACCACTAGTCTAACTAGATAGATTCCCATTTAACCACTAGTCTAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTAACCACTAGTCTAACTAGATAGATTCCCATTTAACCACTAGTCT-AC  999

seq1  TAGATAGATTTCCATTTAACCACTAGTCTCAC-TAGATAGATTCCCA--T  1047
      |||||||||||||||||||||||||||||||| ||||||||||||||  |
seq2  TAGATAGATTTCCATTTAACCACTAGTCTCACTTAGATAGATTCCCATTT  1049

seq1  TTCTGCCTTCTGGGCACTGGGCTGGCCCTCCATGCCTACCCAGCATTTAC  1097
      ||||| ||||| |||||||||||| ||   ||||| ||||   |||||||
seq2  TTCTG-CTTCT-GGCACTGGGCTGACC--TCATGCTTACCAGCCATTTAC  1095

seq1  CTGGATTATTGAAATTTAAACTCTGGTCAAGTCCTCATGCCTATGTTTAT  1147
      ||||| |||||||  || ||||   ||||||| |||||| ||||||||||
seq2  CTGGA-TATTGAA--TTGAACTTCTGTCAAGT-CTCATGGCTATGTTTAT  1141


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