BAC Information

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BAC

Clone NameB6Ng01-180L12
Chromosome7 (Build37)
Map Location 3,207,771 - 3,208,751
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041028, LOC627003, EG664817, Speer9-ps1, AU018091, LOC100041503
Downstream geneNlrp12, GA_x5J8B7W3939-136239-135295, LOC384710, Myadm, Prkcc, Cacng7, LOC672553, Cacng8, Cacng6, LOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180L12.bB6Ng01-180L12.g
ACCGA007074GA007075
length953982
definitionB6Ng01-180L12.b B6Ng01-180L12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctttaccccattgtttaatagggttatttggtt
ctctggagtctaacttgttgagttctttggatatattgaatattggccct
ctatcagatgtgggatttgtaaagatcttttcccaatgtgttggttgact
ttttgcattaatgacagtgtcctttgccttacagaagctttgcaatttta
caaggtcccatttgtcaattcttgatctcacagcccaagccattggtgtt
ctggtcaggaatttttccctgtgcccatatgtttgaggagcttccccact
ttctcctctataagtttcagtgtatctgatttcatgtgggggtccatgat
tcacttagacttgaggtttgtacaaaaagataagaatggattgattctca
ttctgctacttgctgaccaccagttgagccaacaccatttgttgaaaacg
ctgtcttttttccaatggatgattttagctcctttgtcaaagaccaagtg
accttaggtataggggttcatttctgggtcttcaatactatcccattgat
ctacctgtccatcactatgccagaaccatgcagtttttatcacaattgct
ctgtagtactgcttgaggtcctggatggcttttccacaagaagttctttt
attgttgagagtagattttgctatcctaggttttttgttattccagatga
gtttgcaaattgccctttccagctctttgaagaattaatttggaattttg
attgggattgcattgaaatctgtagattgctttcagcaagaagtacattt
ttagtatatcaattcctgccaatccatgaccatgtaagagcttcctatct
tctgagaccttcttccatttttttctccagggattataagttcctcacca
aggtattttatattattttgtgattatttgtgaagggtggttgtttccct
aat
gaattctctatgcaaaccaacctagattttgggaccttgggcatggtctg
ccactcccagctttattgtttttttttgttgttgttgtttgttttttttt
tttgttttttgtttttttagagaggatttcctagagcctaaagtggctag
acagctgaaggtgactttgatttgggccacctgcccccaccccccagaat
gtagatattgcagaacagtttaactcttcttggagagtttatgcagtgct
gagactctgacctaaagttaggtacctgatagggaagcttgctacaagct
cagttacacctctagggacccttgcaggttttcaaagaccctctcctaag
gactcccttggtggcttgtctagggcatggcctagtctccagtcctggcg
tggttggttttagtgccaagccagtggttgctgagtgactcaagttgcaa
accagaactgaagttctccattaaaatgtcctcagcctgacaaggtggct
tatacttctaatcttcactagggagaggaggcaggcagtttgtcaggagt
ttaaagcctgccttggccattcctgagaatgtccaggaagttggcctgtg
acctccatgtctcctggacacatggacacccaacatgtgcatacggaaac
acacaggcaggcacacacacttttaaaatgtaaaatagggctggtgagat
ggctcagcaggtaagagcacccgactgctcttccaaaggtcctgagtttc
aaatcccagcaaccacatggtggctcacaaccatccataacaagatctga
ctccctcttctggtgtgtctgaagacagctacagtgtacttacacataat
caataattaaatcttttaaaataaaaaaaaaaataaaaaaataaaaaagt
aaataaaagaaaatttgccgggcatgtggcacaggcctttaatcccagca
ctttgggaaggcagaagacagacaaatttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_3207771_3208751
seq2: B6Ng01-180L12.g_66_1047 (reverse)

seq1  CAGAAATCTGCCTGTC-TCTGCCT--CCCAAGTGCTGGGATTAAAGGCCT  47
      ||||||| || ||||| |||||||  || |||||||||||||||||||||
seq2  CAGAAATTTGTCTGTCTTCTGCCTTCCCAAAGTGCTGGGATTAAAGGCCT  50

seq1  GTGCCACCATGCCCGGCAATTTTTCTTTTATTTTACTTTTTTATTTTTTT  97
      |||||| |||||||||||| |||||||||| |||||||||||| ||||||
seq2  GTGCCA-CATGCCCGGCAAATTTTCTTTTA-TTTACTTTTTTA-TTTTTT  97

seq1  TATTTTTTTTTTTATTTTTAAAGATTTATTTATTGATTATGTGTAAGTAC  147
      |||||||||||||||||| ||||||||| |||||||||||||||||||||
seq2  TATTTTTTTTTTTATTTTAAAAGATTTAATTATTGATTATGTGTAAGTAC  147

seq1  ACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATCTTGTTATG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATCTTGTTATG  197

seq1  GATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTG-AACTCAGGACCTT  246
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAAACTCAGGACCTT  247

seq1  TGGAAGAGCAGTCGGGTGCTCTTACCTGCTGAGCCATCTCACCAGCCCTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGCAGTCGGGTGCTCTTACCTGCTGAGCCATCTCACCAGCCCTA  297

seq1  TTTTACATTTTAAAAGTGTGTGTGCCTGCCTGTGTGTTTCCGTATGCACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATTTTAAAAGTGTGTGTGCCTGCCTGTGTGTTTCCGTATGCACA  347

seq1  TGTTGGGTGTCCATGTGTCCAGGAGACATGGAGGTCACAGGCCAACTTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGTGTCCATGTGTCCAGGAGACATGGAGGTCACAGGCCAACTTCC  397

seq1  TGGACATTCTCAGGAATGGCCAAGGCAGGCTTTAAACTCCTGACAAACTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATTCTCAGGAATGGCCAAGGCAGGCTTTAAACTCCTGACAAACTG  447

seq1  CCTGCCTCCTCTCCCTAGTGAAGATTAGAAGTATAAGCCACCTTGTCAGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCCTCTCCCTAGTGAAGATTAGAAGTATAAGCCACCTTGTCAGG  497

seq1  CTGAGGACATTTTAATGGAGAACTTCAGTTCTGGTTTGCAACTTGAGTCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGACATTTTAATGGAGAACTTCAGTTCTGGTTTGCAACTTGAGTCA  547

seq1  CTCAGCAACCACTGGCTTGGCACTAAAACCAACCACGCCAGGACTGGAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAACCACTGGCTTGGCACTAAAACCAACCACGCCAGGACTGGAGA  597

seq1  CTAGGCCATGCCCTAGACAAGCCACCAAGGGAGTCCTTAGGAGAGGGTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCATGCCCTAGACAAGCCACCAAGGGAGTCCTTAGGAGAGGGTCT  647

seq1  TTGAAAACCTGCAAGGGTCCCTAGAGGTGTAACTGAGCTTGTAGCAAGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAACCTGCAAGGGTCCCTAGAGGTGTAACTGAGCTTGTAGCAAGCT  697

seq1  TCCCTATCAGGTACCTAACTTTAGGTCAGAGTCTCAGCACTGCATAAACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATCAGGTACCTAACTTTAGGTCAGAGTCTCAGCACTGCATAAACT  747

seq1  CTCCAAGAAGAGTTAAACTGTTCTGCAATATCTACATTCTGGGGGGTGGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGAAGAGTTAAACTGTTCTGCAATATCTACATTCTGGGGGGTGGG  797

seq1  GGCAGGTGGCCCAAATCAAAGTCACCTTCAGCTGTCTAGCCACTTTAGGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTGGCCCAAATCAAAGTCACCTTCAGCTGTCTAGCCACTTTAGGC  847

seq1  TCTAGGAAATCCTCTCTAAAAAAACAAAAAACAAAAAAAAAAAACAAACA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAAATCCTCTCTAAAAAAACAAAAAACAAAAAAAAAAAACAAACA  897

seq1  ACAACAACAAAAAAAAACAATAAAGCTGGGAGTGGCAGACCATGCCCAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAAAAAAAAACAATAAAGCTGGGAGTGGCAGACCATGCCCAAG  947

seq1  GTCCCAAAATCTAGGTTGGTTTGCATAGAGAATTC  981
      |||||||||||||||||||||||||||||||||||
seq2  GTCCCAAAATCTAGGTTGGTTTGCATAGAGAATTC  982