BAC Information

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BAC

Clone NameB6Ng01-182H16
Chromosome7 (Build37)
Map Location 150,455,253 - 150,584,189
singlet/doubletdoublet
Overlap geneKcnq1
Upstream geneLOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5
Downstream geneCdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498, Shank2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182H16.bB6Ng01-182H16.g
ACCGA008358GA008359
length7581,118
definitionB6Ng01-182H16.b B6Ng01-182H16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,455,253 - 150,456,009)(150,583,071 - 150,584,189)
sequence
gaattctgtgaattcagcctgttaagtataccgtgattgacattgccaca
taaggaagccaggagccttcactggcttccaggccatgccagcatctcta
gatctcagagactaggaactaggatgtcctttcctcttaagcttctcatg
gtgccccgaagcctccaactcagtatttatgcctatatttgtattccttt
taggagagttcaggtgtccttggcaaaagccatacctgagacgcatctcc
ttggcaatgactggttagcagaggtctgacgataagcccatggctggatc
tatgggtgatctgggtgacatcttggaaacatggaagagaatggggggaa
gtagataggtgtgggaagccacatgtgctgttgcagagtggcgctcacta
ctgctggccaccacgcataagtttggacaaacaaccaatgtgtacacatg
cagtaaaattttttgcaaagacactgcctggcccgggcatgataatgagg
ctttgagagtataaccaatcagatgtgagacatgcaaatgaggtatgata
atgaggctctgtgaggtacagagagagagtagccaatcagatgaggaaca
tgcaaatgaggcttagtgcataaccaatccaggtgtgagacacgcctctc
ctaggcctatataagcagcaccagttctgggctcggggtctcttcgcctc
tgcaatcaagctctccccaataaatgtgtgcagaaggatcctgttgcagc
attgttac
gaattcagaaccgcccgtaggacttcaggctgccttacacaaatccagag
gccgcttatccttgaacctaggggtctagttgttccatgtataggcctct
aaagagaatgctagtggccgggcgtggtggcgcacacctttaatctcagc
actcgggaggtagaggcaggcggttttctgagtttgaggccagcctggtc
tacaaagtgagttccaggacagccagggctatacagaaaaaccctgtctt
gaaaaacaaaacaaacaaacaaaaaccacaaaaaacaaaacaacaacaac
aacaaaaaagagaatgctagctggattcccacctcctgagtagcctgtga
ccagggtcctggagatggctggctatccaggtttccttaaaggtacagcc
tgttcatagcaagctttggtccttcattgatcttagtatggtttgggtct
gagatgtcctccaaaggctcatctgttaaagacgtgaggtttggaggaag
tgatggacttgcagatagagaaacccataggtagatcctgattttagtgt
actgacaggaggtactgggcactgatgaggtgggatccagctgaagggag
tgggtccttggaggctagatcttgcccctagccccttgcctttgttctct
gttctctagctactacaggggaataaccttgcctctaccagaggctccta
ccaccatgatactgtgccttattgcagcccacagaccacagcaccaagtc
attgcccactgaagcctcccaaaccacaagccaaagcaactccttcttcc
ttttgagttattttttccctcaagaattctgttatagaaacagaaaagtt
gactaatgtgggataagaaagagtgggtacagataacaccaacaagattt
tctccagtgctgaaaaagtgtggtggggaggagttgctatgacatcagcc
tttcccaaggttctatgaggctatgaaggagacctgggtttgtagtcagc
tggcacctggataggccctgctggagttttacatggactctgctcaccaa
accccatactaagtcaagtagcactgagcctaggtaaacgaatgaggtgg
tgctaatagcatcttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_150455253_150456009
seq2: B6Ng01-182H16.b_43_800

seq1  GAATTCTGTGAATTCAGCCTGTTAAGTATACCGTGATTGACATTGCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGAATTCAGCCTGTTAAGTATACCGTGATTGACATTGCCACA  50

seq1  TAAGGAAGCCAGGAGCCTTCACTGGCTTCCAGGCCATGCCAGCATCTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAGCCAGGAGCCTTCACTGGCTTCCAGGCCATGCCAGCATCTCTA  100

seq1  GATCTCAGAGACTAGGAACTAGGATGTCCTTTCCTCTTAAGCTTCTCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCAGAGACTAGGAACTAGGATGTCCTTTCCTCTTAAGCTTCTCATG  150

seq1  GTGCCCCGAAGCCTCCAACTCAGTATTTATGCCTATATTTGTATTCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCCGAAGCCTCCAACTCAGTATTTATGCCTATATTTGTATTCCTTT  200

seq1  TAGGAGAGTTCAGGTGTCCTTGGCAAAAGCCATACCTGAGACGCATCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAGTTCAGGTGTCCTTGGCAAAAGCCATACCTGAGACGCATCTCC  250

seq1  TTGGCAATGACTGGTTAGCAGAGGTCTGACGATAAGCCCATGGCTGGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAATGACTGGTTAGCAGAGGTCTGACGATAAGCCCATGGCTGGATC  300

seq1  TATGGGTGATCTGGGTGACATCTTGGAAACATGGAAGAGAATGGGGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTGATCTGGGTGACATCTTGGAAACATGGAAGAGAATGGGGGGAA  350

seq1  GTAGATAGGTGTGGGAAGCCACATGTGCTGTTGCAGAGTGGCGCTCACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATAGGTGTGGGAAGCCACATGTGCTGTTGCAGAGTGGCGCTCACTA  400

seq1  CTGCTGGCCACCACGCATAAGTTTGGACAAACAACCAATGTGTACACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGCCACCACGCATAAGTTTGGACAAACAACCAATGTGTACACATG  450

seq1  CAGTAAAATTTTTTGCAAAGACACTGCCTGGCCCGGGCATGATAATGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAATTTTTTGCAAAGACACTGCCTGGCCCGGGCATGATAATGAGG  500

seq1  CTTTGAGAGTATAACCAATCAGATGTGAGACATGCAAATGAGGTATGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGAGTATAACCAATCAGATGTGAGACATGCAAATGAGGTATGATA  550

seq1  ATGAGGCTCTGTGAGGTACAGAGAGAGAGTAGCCAATCAGATGAGGAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCTCTGTGAGGTACAGAGAGAGAGTAGCCAATCAGATGAGGAACA  600

seq1  TGCAAATGAGGCTTAGTGCATAACCAATCCAGGTGTGAGACACGCCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATGAGGCTTAGTGCATAACCAATCCAGGTGTGAGACACGCCTCTC  650

seq1  CTAGGCCTATATAAGCAGCACCAGTTCTGGGCTCGGGGTCTCTTCGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCTATATAAGCAGCACCAGTTCTGGGCTCGGGGTCTCTTCGCCTC  700

seq1  TGCAATCAAGCTCT-CCCAATAAATGTGTGCAGAAGGATCCTGTTGCAGC  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGCAATCAAGCTCTCCCCAATAAATGTGTGCAGAAGGATCCTGTTGCAGC  750

seq1  ATTGTTAC  757
      ||||||||
seq2  ATTGTTAC  758

seq1: chr7_150583071_150584189
seq2: B6Ng01-182H16.g_63_1180 (reverse)

seq1  GAGAAGATGCTAATAAAGCCAACCACCTCCCTCTGTTTCCCT-GGCTCAG  49
      |||||||||||| |  |||  ||||||||  || |||| ||| |||||||
seq2  GAGAAGATGCTATT--AGC--ACCACCTCATTC-GTTTACCTAGGCTCAG  45

seq1  TGCTCCTTGGGCCTAGTGTGGGGTTTGGTGAGCAAGAGCCCATGTAAAAC  99
      |||| ||| | | |||| ||||||||||||||| |||| |||||||||||
seq2  TGCTACTT-GACTTAGTATGGGGTTTGGTGAGC-AGAGTCCATGTAAAAC  93

seq1  TCCAGCAGGGCCTATCCA-GTGCCAGCTGACTACAAACCCAGGTCTTCCT  148
      |||||||||||||||||| ||||||||||||||||||||||||||| | |
seq2  TCCAGCAGGGCCTATCCAGGTGCCAGCTGACTACAAACCCAGGTCTCCTT  143

seq1  CATAGCCTCATAG-ACCTTGGG-AAGGCTGATGTCATAGCAACTCTTCCC  196
      ||||||||||||| |||||||| |||||||||||||||||||||| ||||
seq2  CATAGCCTCATAGAACCTTGGGAAAGGCTGATGTCATAGCAACTCCTCCC  193

seq1  CA-CACACCTTTTCAGCACTGGAGAAAATCTTGTTGGTGTTATCTGTACC  245
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACTTTTTCAGCACTGGAGAAAATCTTGTTGGTGTTATCTGTACC  243

seq1  AACTCTTTCTTATCCCACATTAGTCAAC-TTTCTGTTTCTATAACAGAAT  294
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CACTCTTTCTTATCCCACATTAGTCAACTTTTCTGTTTCTATAACAGAAT  293

seq1  TCTTGAGGGAAAAAATAACTCAAAAGGAAGAAGGAGTTGCTTTGGCTTGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGGGAAAAAATAACTCAAAAGGAAGAAGGAGTTGCTTTGGCTTGT  343

seq1  GGTTTGGGAGGCTTCAGTGGGCAATGACTTGGTGCTGTGGTCTGTGGGCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGGAGGCTTCAGTGGGCAATGACTTGGTGCTGTGGTCTGTGGGCT  393

seq1  GCAATAAGGCACAGTATCATGGTGGTAGGAGCCTCTGGTAGAGGCAAGGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAGGCACAGTATCATGGTGGTAGGAGCCTCTGGTAGAGGCAAGGT  443

seq1  TATTCCCCTGTAGTAGCTAGAGAACAGAGAACAAAGGCAAGGGGCTAGGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCCTGTAGTAGCTAGAGAACAGAGAACAAAGGCAAGGGGCTAGGG  493

seq1  GCAAGATCTAGCCTCCAAGGACCCACTCCCTTCAGCTGGATCCCACCTCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATCTAGCCTCCAAGGACCCACTCCCTTCAGCTGGATCCCACCTCA  543

seq1  TCAGTGCCCAGTACCTCCTGTCAGTACACTAAAATCAGGATCTACCTATG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCCCAGTACCTCCTGTCAGTACACTAAAATCAGGATCTACCTATG  593

seq1  GGTTTCTCTATCTGCAAGTCCATCACTTCCTCCAAACCTCACGTCTTTAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCTATCTGCAAGTCCATCACTTCCTCCAAACCTCACGTCTTTAA  643

seq1  CAGATGAGCCTTTGGAGGACATCTCAGACCCAAACCATACTAAGATCAAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAGCCTTTGGAGGACATCTCAGACCCAAACCATACTAAGATCAAT  693

seq1  GAAGGACCAAAGCTTGCTATGAACAGGCTGTACCTTTAAGGAAACCTGGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACCAAAGCTTGCTATGAACAGGCTGTACCTTTAAGGAAACCTGGA  743

seq1  TAGCCAGCCATCTCCAGGACCCTGGTCACAGGCTACTCAGGAGGTGGGAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGCCATCTCCAGGACCCTGGTCACAGGCTACTCAGGAGGTGGGAA  793

seq1  TCCAGCTAGCATTCTCTTTTTTGTTGTTGTTGTTGTTTTGTTTTTTGTGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTAGCATTCTCTTTTTTGTTGTTGTTGTTGTTTTGTTTTTTGTGG  843

seq1  TTTTTGTTTGTTTGTTTTGTTTTTCAAGACAGGGTTTTTCTGTATAGCCC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTGTTTGTTTTGTTTTTCAAGACAGGGTTTTTCTGTATAGCCC  893

seq1  TGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAA  943

seq1  AACCGCCTGCCTCTACCTCCCGAGTGCTGAGATTAAAGGTGTGCGCCACC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGCCTGCCTCTACCTCCCGAGTGCTGAGATTAAAGGTGTGCGCCACC  993

seq1  ACGCCCGGCCACTAGCATTCTCTTTAGAGGCCTATACATGGAACAACTAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCCGGCCACTAGCATTCTCTTTAGAGGCCTATACATGGAACAACTAG  1043

seq1  ACCCCTAGGTTCAAGGATAAGCGGCCTCTGGATTTGTGTAAGGCAGCCTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTAGGTTCAAGGATAAGCGGCCTCTGGATTTGTGTAAGGCAGCCTG  1093

seq1  AAGTCCTACGGGCGGTTCTGAATTC  1119
      |||||||||||||||||||||||||
seq2  AAGTCCTACGGGCGGTTCTGAATTC  1118