BAC Information

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BAC

Clone NameB6Ng01-182M13
Chromosome7 (Build37)
Map Location 17,612,060 - 17,613,224
singlet/doubletsinglet
Overlap genePpp5c
Upstream geneZfp541, Napa, Kptn, Slc8a2, Mrg2, Dhx34, Gpr77, C5ar1, 2610014I16Rik, Ccdc9, Bbc3, Sae1, BC057627, Tmem160, Npas1, LOC629352, Grlf1, LOC670915, LOC100038912, Ceacam15, EG666641, LOC434127, Ceacam9, Ap2s1, Slc1a5, Fkrp, Strn4, Prkd2, Dact3, Gng8, Ptgir, Calm3, EG434128, 0710005I19Rik, LOC100042835, LOC434130
Downstream geneHif3a, Psg16, LOC100042844, LOC640145, Ceacam3, Psg29, LOC414361, LOC671132, LOC100042868, Psg-ps1, LOC666767, Psg30, Ppia-ps7_184.1, Ceacam14, EG381852, Ceacam11, Ceacam13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182M13.bB6Ng01-182M13.g
ACCGA008583GA008584
length1,1591,159
definitionB6Ng01-182M13.b B6Ng01-182M13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagattttgcatgctctgtccccttatcttaatcttctcttgtat
cagtcttcccctcgtacccccagtttcctcaaactccagccaagccagtc
tgttttcaatcactctccaccccagggtcttcacacaaactcagtggtca
ggacccacgtgtaaaactccttgtcaattcgcctcaaaaagcctctttct
ccaggcactcccgacctcaccatcgaaagcagactctaagctgtatttcc
tgtgttgtcaccttgacccaaagtgatcatcacaagtttgcaatgattgg
ttctgcttaaatccgagtcatgtgttgcattcatcgctgcagcctcagag
ccaagcacaggccgtgtagcacatgacacttatttaatacaagtgtactg
aaagaatgaatgaacggagacatgtcctcccacatggcactcttagccca
agatcaccctattcgttcctgctccacctctccaccctactcgtttcctt
ggatcaccccaaatcgccttccaatataattatctacctccatccccata
attcccttctctattgggccttctcttctcggtcatactcatctcaggcc
tccccactcggcagcgccatcactgccctaaacacatgtcactatttggt
agcgccctcttcaggtctgaccaccatttagcacctctgtccaggtctca
catttggtagcactcacatgtcggccccctgcttttcccctatcgtgtag
cagcgcctgcctcagtctccccagtgagtggcttctgcttggtatccact
tctcagcagctctccccagtctgtcgtccagcctgagcctcctcctcgcg
cctggctactctgtagtgcttgcccggcgcccaggctgccgctccgcgtt
gccatggttccccgccgggcctggcacccccacagcctgggccgctgtcc
accctccctcaccccgtccgggccgggcgcaccttgaagtagtcgttggc
ctgtgtctgagctcctctgcccgcttcagaagtgccatcggccgggggtt
cgtcccggggggtcttcagcacactcagtccgctccgccctccgcatcgc
catgccgcaagcgaccccaccttgcaacggccgctcgcgtaacaggcgaa
ccgtccgaa
gaattcactggacttaattgtcgagggccatacaggaggaacaacatttg
gaaatgactttagaactcatggaatgtggcccactagttactacagccca
tgaatgagcctcactgtgacatggccagaggactggtgtcctgaggactt
cacgctgttatgaaggtctgctctgcttgctgccctcatatccttcttca
tctaaattatgtgaaaaatctaaggggtcttctagtccctcactgggcaa
tatttctggcactcacaataataatgattgatctctttcagaattgctgc
tggggcagattaatgattcaaaccccaccctaggaaagaacttagagacg
tagactgtccacaatgaccatcacccttagaaaacatttggaaaaataaa
attgttagtgaaactatgttgagatgtttttactatgggatccgatgtag
aaaatcttagggaacaatctgaagttcagaaagtcacactcttagtagtt
aagctaggaccttttatagtcagggaacaagaggaatggcagcactgact
gacctgactctcattgaggctggctagtgatgatgttacccatttttgcc
ctcagcttcctgatgtgatttattgaaagttgcaaatgagtaatgtgctg
tgcattctgaggatttaaggtagatatgactgacttttatataaaatttt
ggctttgtaattcttttaagctttttacaagattacttttaaagataaat
aataaactaattactgccttctttgtaaatttcttcctgcccataagaga
aactggctgagaaaactactttgcttgcttacactttgttaatctataac
gaattgcttagttacaaatgcacatgggtttttggaaataattgttgtct
tacctgcactatataatgttatttctgtaaagaacttttatcatttaagg
catgttagattttttgtcaaagacgttttttctgcactagagatgatata
tagcttattgtatataagtattgtatatatagtgttgttaccatatctat
catctatcttctacctatctatctatctatctatcattgtaatctattca
tgaaaccaagtataaatgcaggaatgtgcactgaaaagtttgctggatat
cataggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_17612060_17613224
seq2: B6Ng01-182M13.b_41_1199

seq1  GAATTCAGATTTTGCATGCTCTGTCCCCTTATCTTAATCTTCTCTTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTTTGCATGCTCTGTCCCCTTATCTTAATCTTCTCTTGTAT  50

seq1  CAGTCTTCCCCTCGTACCCCCAGTTTCCTCAAACTCCAGCCAAGCCAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTCCCCTCGTACCCCCAGTTTCCTCAAACTCCAGCCAAGCCAGTC  100

seq1  TGTTTTCAATCACTCTCCACCCCAGGGTCTTCACACAAACTCAGTGGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAATCACTCTCCACCCCAGGGTCTTCACACAAACTCAGTGGTCA  150

seq1  GGACCCACGTGTAAAACTCCTTGTCAATTCGCCTCAAAAAGCCTCTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCACGTGTAAAACTCCTTGTCAATTCGCCTCAAAAAGCCTCTTTCT  200

seq1  CCAGGCACTCCCGACCTCACCATCGAAAGCAGACTCTAAGCTGTATTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCACTCCCGACCTCACCATCGAAAGCAGACTCTAAGCTGTATTTCC  250

seq1  TGTGTTGTCACCTTGACCCAAAGTGATCATCACAAGTTTGCAATGATTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTCACCTTGACCCAAAGTGATCATCACAAGTTTGCAATGATTGG  300

seq1  TTCTGCTTAAATCCGAGTCATGTGTTGCATTCATCGCTGCAGCCTCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTAAATCCGAGTCATGTGTTGCATTCATCGCTGCAGCCTCAGAG  350

seq1  CCAAGCACAGGCCGTGTAGCACATGACACTTATTTAATACAAGTGTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCACAGGCCGTGTAGCACATGACACTTATTTAATACAAGTGTACTG  400

seq1  AAAGAATGAATGAACGGAGACATGTCCTCCCACATGGCACTCTTAGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATGAATGAACGGAGACATGTCCTCCCACATGGCACTCTTAGCCCA  450

seq1  AGATCACCCTATTCGTTCCTGCTCCACCTCTCCACCCTACTCGTTTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACCCTATTCGTTCCTGCTCCACCTCTCCACCCTACTCGTTTCCTT  500

seq1  GGATCACCCCAAATCGCCTTCCAATATAATTATCTACCTCCATCCCCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCACCCCAAATCGCCTTCCAATATAATTATCTACCTCCATCCCCATA  550

seq1  ATTCCCTTCTCTATTGGGCCTTCTCTTCTCGGTCATACTCATCTCAGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTCTCTATTGGGCCTTCTCTTCTCGGTCATACTCATCTCAGGCC  600

seq1  TCCCCACTCGGCAGCGCCATCACTGCCCTAAACACATGTCACTATTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACTCGGCAGCGCCATCACTGCCCTAAACACATGTCACTATTTGGT  650

seq1  AGCGCCCTCTTCAGGTCTGACCACCATTTAGCACCTCTGTCCAGGTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCCCTCTTCAGGTCTGACCACCATTTAGCACCTCTGTCCAGGTCTCA  700

seq1  CATTTGGTAGCACTCACATGTCGGCCCCCTGCTTTTCCCCTATCGTGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGTAGCACTCACATGTCGGCCCCCTGCTTTTCCCCTATCGTGTAG  750

seq1  CAGCGCCTGCCTCAGTCTCCCCAGTGAGTGGCTTCTGCTTGGTATCCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCCTGCCTCAGTCTCCCCAGTGAGTGGCTTCTGCTTGGTATCCACT  800

seq1  TCTCAGCAGCTCTCCCCAGTCTGTCGTCCAGCCTGAGCCTCCTCCTCGCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCAGCTCTCCCCAGTCTGTCGTCCAGCCTGAGCCTCCTCCTCGCG  850

seq1  CCTGGCTACTCTGTAGTGCTTGCCCGGCGCCCAGGCTGCCGCTCCGCGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTACTCTGTAGTGCTTGCCCGGCGCCCAGGCTGCCGCTCCGCGTT  900

seq1  GCCATGGTTCCCCGCCGGGCCTGGCACCCCCACAGCCTGGGCCGCTGTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGTTCCCCGCCGGGCCTGGCACCCCCACAGCCTGGGCCGCTGTCC  950

seq1  ACCCTCCCTCACCCCGTCCGGGCCGGGCGCACCTTTGAAGTAGTCGTTGG  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACCCTCCCTCACCCCGTCCGGGCCGGGCGCACC-TTGAAGTAGTCGTTGG  999

seq1  CCTGTGTCTTGAGCTCCTCTGCCCGCTTCAG-AGTGCCATCGGCCGGGGG  1049
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  CCTGTGTC-TGAGCTCCTCTGCCCGCTTCAGAAGTGCCATCGGCCGGGGG  1048

seq1  TTCGTCCCGGGGGGTC-TCAGCACACTCAGTCCGCT-CGCCCTCCGCCAT  1097
      |||||||||||||||| ||||||||||||||||||| ||||||||| |||
seq2  TTCGTCCCGGGGGGTCTTCAGCACACTCAGTCCGCTCCGCCCTCCG-CAT  1097

seq1  CGCCATGCCGCAAAGCGACCCCCACCCTGGCAACGGCCGCTCGCGGCACC  1147
      ||||||||||| ||||||||||   ||| ||||||||||||||| | | |
seq2  CGCCATGCCGC-AAGCGACCCC--ACCTTGCAACGGCCGCTCGC-GTAAC  1143

seq1  AGGCCGAACCGTCGCGAA  1165
      ||| ||||||||| ||||
seq2  AGG-CGAACCGTC-CGAA  1159