BAC Information

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BAC

Clone NameB6Ng01-187A15
Chromosome7 (Build37)
Map Location 134,525,277 - 134,670,247
singlet/doubletdoublet
Overlap gene9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597
Upstream geneNfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik
Downstream geneD030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187A15.bB6Ng01-187A15.g
ACCGA011725GA011726
length8851,169
definitionB6Ng01-187A15.b B6Ng01-187A15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,525,277 - 134,525,892)(134,669,060 - 134,670,247)
sequence
gaattccacacccctaagcaccttaccccataaaaacccctagctttcga
gcctcgtggccgacatccgttatctcctgtgtgggatgcatgttggtcta
gagctccgtcattaaacgacctcatgtaattacatcaacatggtccttcg
tgattttttgagtgcacgccaaatcgggaattgagtgggggtttcctcac
taggttctatcaacaccacaattaatggcttcaaacagaagtaaggaaag
atactgacaattttggcattttggttaccttaaaagacacaaaagcattg
taagaatgttttcatcttaactccaggtgtgggatctggggctgcttcag
agtgtccacaaggctgactacaacttgcctcctgctctaacaggggagtg
attttgcgaactgcagatagtttctgtgactgtgtgatgattggcatctt
ggggacttttcagtggatatataataaatgctagggccccgagagggtat
gtggttagttatggtctgttaagtggttgtgtccaaagaagagagaacaa
aaagtaattaggtattctaacaaagatcaaacttgccccaatgaactcaa
ggtccctaatagcagaaccattttaaggatgacatcgccgcatttctgat
acctgagttattcagtgatctctttccctttctctctatcctttcctttt
tttctgtagtgtttaggggggctgcgagggcggaaagaaaagaaccccac
aaaatagctgtagattgaattttggattctcagcttttacaaagtactaa
cagcttctcttcacaagctctgcctcattttcctgcttttttcttttact
gttagtttaactataggtcagtattgtgcacattg
gaattcactatgtaaaccaagctggtctccaagatctacctgcctctgcc
ttctgagtgctgggataaaggtttatcacactacacaagctctaaaagat
tcaaaaaaaatttttttatttatgtatatgggtagcttgcctgtatgtac
atttgcacaccagaagaggacattggatccagatgattatgggccaccat
gtgggtgctgagaactgaactcaggacctttggaagagcagccagtgctc
ttaaccactgagtcatctctctagtgccccccaaaagatttttaagatga
ctatcacaacttccaaatttgtatcacctaacaatttttgtatacacaca
cacacacacacacacacacacacacacacacacacacagataaataaata
acctgcacgtttgtacatggttatggaaaccagagcacattgtttggtgt
cttcctcactcactctccaatgaactcggagctcactgatttagctagac
aaggaagctcttaatgttgagattactgtaacataccactgcacacacct
tgtgttatgagccagatgaggcaatgaactaagctacttctctccagccc
tccccctaggaattttaaaagtacaataaatgtttccattatattagaaa
ccttgccagttgcaggcttcaacttggtttgcaaatgatcaattcctatc
aatgaaactccaactgtccttaacccagattcttaaaaccatggatcaac
ctatgcacaggatttgagagcaaaactttacatctatttccccttgaatc
tttcttcctgtaccttttctgtttatacctctaaatcctgagatggctcc
tcttcaatattttcttcagcccatcctgggtatcactgtcatgagaaggt
gtttgagaggggctaaaaggcccacccaataactgaggagggagggaacg
gagcagctcttccagtggcagttctcctcatgtcgaagaagttcatctca
cgctctgggtctctgcatcattgcttcctggtgtctcactcatgtctctc
atcatcttctcttctctctggggttgaagtccccattctatagcagagac
agttacaaagtcactggtctgcaagtcacagggtggcttttcaagcttct
ggcaagggcacacttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134525277_134525892
seq2: B6Ng01-187A15.b_304_930

seq1  AATTTTGGCATTTTGGTTACCTTAAAAGACACAAAAGCATTGTAAGAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGCATTTTGGTTACCTTAAAAGACACAAAAGCATTGTAAGAATG  50

seq1  TTTTCATCTTAACTCCAGGTGTGGGATCTGGGGCTGCTTCAGAGTGTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATCTTAACTCCAGGTGTGGGATCTGGGGCTGCTTCAGAGTGTCCA  100

seq1  CAAGGCTGACTACAACTTGCCTCCTGCTCTAACAGGGGAGTGATTTTGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTGACTACAACTTGCCTCCTGCTCTAACAGGGGAGTGATTTTGCG  150

seq1  AACTGCAGATAGTTTCTGTGACTGTGTGATGATTGGCATCTTGGGGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCAGATAGTTTCTGTGACTGTGTGATGATTGGCATCTTGGGGACTT  200

seq1  TTCAGTGGATATATAATAAATGCTAGGGCCCCGAGAGGGTATGTGGTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGGATATATAATAAATGCTAGGGCCCCGAGAGGGTATGTGGTTAG  250

seq1  TTATGGTCTGTTAAGTGGTTGTGTCCAAAGAAGAGAGAACAAAAAGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTCTGTTAAGTGGTTGTGTCCAAAGAAGAGAGAACAAAAAGTAAT  300

seq1  TAGGTATTCTAACAAAGATCAAACTTGCCCCAATGAACTCAAGGTCCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATTCTAACAAAGATCAAACTTGCCCCAATGAACTCAAGGTCCCTA  350

seq1  ATAGCAGAACCATTTTAAGGATGACATCGCCGCATTTCTGATACCTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGAACCATTTTAAGGATGACATCGCCGCATTTCTGATACCTGAGT  400

seq1  TATTCAGTGATCTCTTTCCCTTTCTCTCTATCCTTTCC-TTTTTTCTGTA  449
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TATTCAGTGATCTCTTTCCCTTTCTCTCTATCCTTTCCTTTTTTTCTGTA  450

seq1  GTGTT--AGGGGGCTGCGAGGGCGGAA--GAAAGAA-CCCACAAAATAGC  494
      |||||   |||||||||||||||||||   |||||| |||||||||||||
seq2  GTGTTTAGGGGGGCTGCGAGGGCGGAAAGAAAAGAACCCCACAAAATAGC  500

seq1  TGTAGATTGAA-TTTGGATTCTCAGC-TTTACAAAGTACTAACAGC-TCT  541
      ||||||||||| |||||||||||||| ||||||||||||||||||| |||
seq2  TGTAGATTGAATTTTGGATTCTCAGCTTTTACAAAGTACTAACAGCTTCT  550

seq1  CTTCACAAGCTCTGCCTCATTTTCCTGCTTTTTTCTTTTACTGTTAGTTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAAGCTCTGCCTCATTTTCCTGCTTTTTTCTTTTACTGTTAGTTT  600

seq1  AACTATA-GTCAGTA-TGTGCACATGG  616
      ||||||| ||||||| ||||||||| |
seq2  AACTATAGGTCAGTATTGTGCACATTG  627

seq1: chr7_134669060_134670247
seq2: B6Ng01-187A15.g_61_1229 (reverse)

seq1  CCCCAA--GTGCCCTTTCCAG-AGCTGAAAAACCCACCCTGTGGCTTGCA  47
      ||||||  |||||||| |||| ||||  |||| |||||||||| ||||||
seq2  CCCCAAGTGTGCCCTTGCCAGAAGCTTGAAAAGCCACCCTGTGACTTGCA  50

seq1  GGGCCCGTGGACTTTGTGACCTTGTTCTCCTGCTATAG-ATGGGGACTTT  96
       | || || |||||||| ||  || ||| ||||||||| |||||||| ||
seq2  -GACCAGT-GACTTTGTAAC--TG-TCT-CTGCTATAGAATGGGGAC-TT  93

seq1  CAACCCCAAGAGGAAGAAGAGGAAGATGATGAGGAGACCATTGAGGTTGA  146
      ||||||| ||||  |||||| ||||||||||| |||||   ||||  |||
seq2  CAACCCC-AGAG--AGAAGA-GAAGATGATGA-GAGAC--ATGAG--TGA  134

seq1  AGAACAACAGGAAGGCAATGATGCAGAGACCCAGAGGCGTGAGATTGAAC  196
         ||| |||||| ||||||||||||||||||||| |||||||| |||||
seq2  --GACACCAGGAA-GCAATGATGCAGAGACCCAGA-GCGTGAGA-TGAAC  179

seq1  TTCTTCGACATGAGGGAGAACTGCCACTGGAAGAGCTGCTCCGTTCCCTC  246
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCTTCGACATGA-GGAGAACTGCCACTGGAAGAGCTGCTCCGTTCCCTC  228

seq1  CCTCCTCAGTTATTGGGTGGGCCTTTTAGCCCCTCTCAAACACCTTCTCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCAGTTATTGGGTGGGCCTTTTAGCCCCTCTCAAACACCTTCTCA  278

seq1  TGACAGTGATACCCAGGATGGGCCTGAAGAAAATATTGAAGAGGAGCCAT  346
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGACAGTGATACCCAGGATGGG-CTGAAGAAAATATTGAAGAGGAGCCAT  327

seq1  CTCAGGATTTAGAGGTATAAACAGAAAAGGTACAGGAAGAAAGATTCAAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGATTTAGAGGTATAAACAGAAAAGGTACAGGAAGAAAGATTCAAG  377

seq1  GGGAAATAGATGTAAAGTTTTGCTCTCAAATCCTGTGCATAGGTTGATCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATAGATGTAAAGTTTTGCTCTCAAATCCTGTGCATAGGTTGATCC  427

seq1  ATGGTTTTAAGAATCTGGGTTAAGGACAGTTGGAGTTTCATTGATAGGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTTAAGAATCTGGGTTAAGGACAGTTGGAGTTTCATTGATAGGAA  477

seq1  TTGATCATTTGCAAACCAAGTTGAAGCCTGCAACTGGCAAGGTTTCTAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCATTTGCAAACCAAGTTGAAGCCTGCAACTGGCAAGGTTTCTAAT  527

seq1  ATAATGGAAACATTTATTGTACTTTTAAAATTCCTAGGGGGAGGGCTGGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGAAACATTTATTGTACTTTTAAAATTCCTAGGGGGAGGGCTGGA  577

seq1  GAGAAGTAGCTTAGTTCATTGCCTCATCTGGCTCATAACACAAGGTGTGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTAGCTTAGTTCATTGCCTCATCTGGCTCATAACACAAGGTGTGT  627

seq1  GCAGTGGTATGTTACAGTAATCTCAACATTAAGAGCTTCCTTGTCTAGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGTATGTTACAGTAATCTCAACATTAAGAGCTTCCTTGTCTAGCT  677

seq1  AAATCAGTGAGCTCCGAGTTCATTGGAGAGTGAGTGAGGAAGACACCAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTGAGCTCCGAGTTCATTGGAGAGTGAGTGAGGAAGACACCAAA  727

seq1  CAATGTGCTCTGGTTTCCATAACCATGTACAAACGTGCAGGTTATTTATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGCTCTGGTTTCCATAACCATGTACAAACGTGCAGGTTATTTATT  777

seq1  TATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  827

seq1  TACAAAAATTGTTAGGTGATACAAATTTGGAAGTTGTGATAGTCATCTTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAATTGTTAGGTGATACAAATTTGGAAGTTGTGATAGTCATCTTA  877

seq1  AAAATCTTTTGGGGGGCACTAGAGAGATGACTCAGTGGTTAAGAGCACTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTTTGGGGGGCACTAGAGAGATGACTCAGTGGTTAAGAGCACTG  927

seq1  GCTGCTCTTCCAAAGGTCCTGAGTTCAGTTCTCAGCACCCACATGGTGGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCTTCCAAAGGTCCTGAGTTCAGTTCTCAGCACCCACATGGTGGC  977

seq1  CCATAATCATCTGGATCCAATGTCCTCTTCTGGTGTGCAAATGTACATAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATCATCTGGATCCAATGTCCTCTTCTGGTGTGCAAATGTACATAC  1027

seq1  AGGCAAGCTACCCATATACATAAATAAAAAAATTTTTTTTGAATCTTTTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGCTACCCATATACATAAATAAAAAAATTTTTTTTGAATCTTTTA  1077

seq1  GAGCTTGTGTAGTGTGATAAACCTTTATCCCAGCACTCAGAAGGCAGAGG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGTGTAGTGTGATAAACCTTTATCCCAGCACTCAGAAGGCAGAGG  1127

seq1  CAGGTAGATCTTGGAGACCAGCTTGGTTTACATAGTGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGATCTTGGAGACCAGCTTGGTTTACATAGTGAATTC  1169