BAC Information

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BAC

Clone NameB6Ng01-189H12
Chromosome7 (Build37)
Map Location 3,363,696 - 3,364,540
singlet/doubletsinglet
Overlap geneCacng7
Upstream geneLOC100041028, LOC627003, EG664817, Speer9-ps1, AU018091, LOC100041503, Nlrp12, GA_x5J8B7W3939-136239-135295, LOC384710, Myadm, Prkcc
Downstream geneLOC672553, Cacng8, Cacng6, LOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801, Ncr1, Gp6, LOC100041851, Atp6v0c-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189H12.bB6Ng01-189H12.g
ACCGA013483GA013484
length828848
definitionB6Ng01-189H12.b B6Ng01-189H12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtaccccatttttaatggggttatttgaatttctggagtcc
agcttcatgagctctttgtatatattggatattagtcccctatcagattt
aggattggtaaaaatcctttcccaatctgttggtggcctttttgtcttat
tgacagtgtcttttgccttacagaagctttgaaattttatgaggtcccat
ttgtcaattcttgatcttacagcacaagccattgctgttctgtttaggaa
tttttgcccatatcttcaatgtttttccctactttctcctcaataaattt
gtgtccctgtttttttttaaagatttatttattattatatctaagtacac
tgtagctgtcttcagacacaacagaagagggcgtcagatttcattacgga
tggttgtgagccaccatgtggttgctgggatttgaactcaggaccttctg
gagagcagtctgtgctcttaaccactgagccatctctccagcccagtgtc
tctggttttatgtggaggtctttgatccacttagacttgagctttgtaca
aggagataagaatggatcaattcgcattcttctacatgctaaccgccagt
tgtgccagcaccatttgttgaaaatgctgtcatttttctggtggatggct
ttagctcccttgtcaaagatcaagtgaccataggtgtgtgggttcatttc
tgggtcttcaattctattccattgatctacctgtctgtcgctgtaccagt
accatgcagttttgttgttgtttttttttaatcaaaattggtctgtagta
cagcttaaggtcaggcatggtgattcca
gaattcacttgttttgttttgttttgttttttggagacagggtttctctg
tacagccctggatgtcctggaactcactttgtagaccagtctggcctcga
actcagaaatctgcctgcctctggcccccaagtgctgggattacaggcat
gagccaccactgcctggcccacttctagttttgttgttggtttgtttttt
ctgcatgtatgtctgtgcagcatgtgtgtgcagtgtctgtaaaggacagg
agagggtatcagataccttgaaactgcagttacagacagttgtaatccac
agtgtgggtgctaggaagtgaacttggatcctctgcaagagcagcaagca
actgctgaggcatctctctagcccctaaagagtattacgttttcttttat
atttatttattgaggtatatgtgcaagtgcagtattgctcatttagaagt
caaaggacaacttgtgggaatcagttctctctatcatttatatcttgggg
ttcaaactcaggtcttcagggtcgtcagcaagcacttttacccactgaac
catttcataagcatgaaactcacagactttaaacatttggggtatgtttc
acataaaacacaactcacatattaccgtgacttttatctccttggcttat
tttacccgatccttaggacaggagttatagacagtggtgagctgccactg
tggtgcagagatttaaacccagatcctctggaagagcagccagtgtttct
taaccattgtgccatctcacgagccaccagctctccctaagaacacttat
gcttttgtgcatgagcatatacacattcgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_3363696_3364540
seq2: B6Ng01-189H12.g_68_915

seq1  GAATTCACTTGTTTTGTTTTGTTTTGTTTTTTGGAGACAGGGTTTCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTTTTGTTTTGTTTTGTTTTTTGGAGACAGGGTTTCTCTG  50

seq1  TACAGCCCTGGATGTCCTGGAACTCACTTTGTAGACCAGTCTGGCCTCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCCCTGGATGTCCTGGAACTCACTTTGTAGACCAGTCTGGCCTCGA  100

seq1  ACTCAGAAATCTGCCTGCCTCTGGCCCCCAAGTGCTGGGATTACAGGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAATCTGCCTGCCTCTGGCCCCCAAGTGCTGGGATTACAGGCAT  150

seq1  GAGCCACCACTGCCTGGCCCACTTCTAGTTTTGTTGTTGGTTTGTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACCACTGCCTGGCCCACTTCTAGTTTTGTTGTTGGTTTGTTTTTT  200

seq1  CTGCATGTATGTCTGTGCAGCATGTGTGTGCAGTGTCTGTAAAGGACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGTATGTCTGTGCAGCATGTGTGTGCAGTGTCTGTAAAGGACAGG  250

seq1  AGAGGGTATCAGATACCTTGAAACTGCAGTTACAGACAGTTGTAATCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTATCAGATACCTTGAAACTGCAGTTACAGACAGTTGTAATCCAC  300

seq1  AGTGTGGGTGCTAGGAAGTGAACTTGGATCCTCTGCAAGAGCAGCAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGGTGCTAGGAAGTGAACTTGGATCCTCTGCAAGAGCAGCAAGCA  350

seq1  ACTGCTGAGGCATCTCTCTAGCCCCTAAAGAGTATTACGTTTTCTTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGAGGCATCTCTCTAGCCCCTAAAGAGTATTACGTTTTCTTTTAT  400

seq1  ATTTATTTATTGAGGTATATGTGCAAGTGCAGTATTGCTCATTTAGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTGAGGTATATGTGCAAGTGCAGTATTGCTCATTTAGAAGT  450

seq1  CAAAGGACAACTTGTGGGAATCAGTTCTCTCTATCATTTATATCTTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGACAACTTGTGGGAATCAGTTCTCTCTATCATTTATATCTTGGGG  500

seq1  TTCAAACTCAGGTCTTCAGGGTCGTCAGCAAGCACTTTTACCCACTGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACTCAGGTCTTCAGGGTCGTCAGCAAGCACTTTTACCCACTGAAC  550

seq1  CATTTCATAAGCATGAAACTCACAGACTTTAAACATTTGGGGTATGTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATAAGCATGAAACTCACAGACTTTAAACATTTGGGGTATGTTTC  600

seq1  ACATAAAACACAACTCACATATTACCGTGACTTTTATCTCCTTGGCTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAACACAACTCACATATTACCGTGACTTTTATCTCCTTGGCTTAT  650

seq1  TTTACCCGATCCTTAGGACAGGAGTTATAGACAGTGGTGAGCTGCCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCGATCCTTAGGACAGGAGTTATAGACAGTGGTGAGCTGCCACTG  700

seq1  TGGTGCAGAGATTTAAACCCAGATCCTCTGGAAGAGCAGCCAGTG-TTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGTGCAGAGATTTAAACCCAGATCCTCTGGAAGAGCAGCCAGTGTTTCT  750

seq1  TAACCATTGTGCCATCTCACGAGCCACCAGCTCT-CCTAAGAACACTTAT  798
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAACCATTGTGCCATCTCACGAGCCACCAGCTCTCCCTAAGAACACTTAT  800

seq1  GC-TTTGTGCATGAGCATATACACATTCGTGTGTGTGTGTGTGTGTGT  845
      || |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTGCATGAGCATATACACATTCGTGTGTGTGTGTGTGTGTGT  848