BAC Information

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BAC

Clone NameB6Ng01-189L02
Chromosome7 (Build37)
Map Location 50,519,253 - 50,520,411
singlet/doubletsinglet
Overlap genenone
Upstream geneGprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620
Downstream geneZfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189L02.bB6Ng01-189L02.g
ACCGA013646GA013647
length1,2051,163
definitionB6Ng01-189L02.b B6Ng01-189L02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtttgtgctgcccatgtgtacatgtggccatttcttgaagcag
agacaacttactgggtggttgttgcatttccaaaagttagtgactctccc
tttgtagccatcagcttccaagagctcctctactagggttagagccatag
gatcttcctcagtccttgttgggctggaatttttgctggcttgatctttg
caatatttttcattctcatgtctgctagactagcctgtgaaagtgtagta
ggaaaacacagtggtctctgggtttttcctccagagatataaccaattat
ggactaacagtataaataatgtgtctatcctgagtatgcagattttgtcc
tgaccaatactcctcaaatactaaagcatgtacagagcttgcactgtatc
aaggatcatatataattcagaaatgacttaaagtacatgagaggatatac
agagactggttgccagcactaaatctattttctactatttgcctgctatt
atcatccatccacccatccatccatctatccatctatccatctatctatc
tatctatctatctatctatctatctatctatctatctatctggtgttgct
atgtatgtagccttcaccagctgggaacttactatttagctcagattggt
cttaaactcaggattcttctgcttcagcctcctgagtgctggggttatag
gcatgcacacccccatccacagtgccattgttagcttcagttgttacttg
acacacctgggaaaatctgaggaattctctccattgaattgacctgtggc
catgtctatgcagcatttttcttaagtgctgattaatgtaggagggccca
ggccatggtgggcagtactattttctgagttggtggtcctggggctaata
taggaagcaagctgaacaagccagagggagaggccagcaagcagcattcc
ctatgtagtctcagcatcagttccctccattgttccttgcttggcttccc
ttaagggatggacttggacatgaatgccaagcaaaacaagcccttttctt
cccccagcttgttttgtcagtgcttttttcacagcaacatataggaactt
agatgattaggataccaatttttaatcattaacctatctcttggatattc
caaatgcaatgaatagttggaatatcctcttctcatactgagctcctcct
ggata
gaattcataccggagagaaaccttacaagtgtaatcaatgtgacaaagcc
ttttcacaacaccctagtctccaaatgcataaaagaacacatactggaga
gaaaccctacaaatgcaatcaatgtgataaggcctttgcacaaaacagta
gtctccaaatgcatacaagaacacatactggagagaaaccttatgaatgt
catcaatgtggtaaagccttttcacgtcacagtagtctccaaacccataa
aaggcaccatacaggagagaagccctatgaatgtaatcactgtggtgaag
tctttgcatatctcagtagtctccagtaccacaaaaggaatcatctggga
gaggaaccctatccagttctttaacatggtaaggcctttgtggatttctg
tagccttcatcatgaagtattcatactgcagagaaaccatatgaatggaa
gaaatgtggtaaagcttttgtacatcacagttatctcttaatgtagaaaa
aaccagatattagaaattgttatttgaagtgttatcaaagtggttccata
gcaggatttaatctggcagtttgggagagtaagctaagtttgtatttgcc
agaactggaaaagtgccaaacaagtcaattctacaaaaaaaccacccctc
atgggcagccaatcaggagctttagaagccacccacctagcttgaaccat
atatagttaattatcaaaaattccccaaaccccccagagccttagccaat
cacagaggcaccatacccctcaagatagaaccaaccaatcaagagaaaga
aaggtaaaagccacccactcctaacctaacagtttttaaattgaccctga
aaagcccacatctctgtcttccatcctggtatatggataacaatacagtt
atgtctgaatgcataaaagtagatagactggagagaaactctatgaatgt
aatcagtgtggtatagccctttgcataacatgatcatctttgatacataa
aaaacatactgtcgtgaattctatgacgtaatcagtgtgataagcttttg
catatcacatttcatcctccaagccatgaaagggatttaatacctaaaag
agcactattgaaggtattaaattatttattgaagtctggcacattccagt
tatggacctgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50519253_50520411
seq2: B6Ng01-189L02.g_66_1228

seq1  GAATTCATACCGGAGAGAAACCTTACAAGTGTAATCAATGTGACAAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACCGGAGAGAAACCTTACAAGTGTAATCAATGTGACAAAGCC  50

seq1  TTTTCACAACACCCTAGTCTCCAAATGCATAAAAGAACACATACTGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACAACACCCTAGTCTCCAAATGCATAAAAGAACACATACTGGAGA  100

seq1  GAAACCCTACAAATGCAATCAATGTGATAAGGCCTTTGCACAAAACAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTACAAATGCAATCAATGTGATAAGGCCTTTGCACAAAACAGTA  150

seq1  GTCTCCAAATGCATACAAGAACACATACTGGAGAGAAACCTTATGAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCAAATGCATACAAGAACACATACTGGAGAGAAACCTTATGAATGT  200

seq1  CATCAATGTGGTAAAGCCTTTTCACGTCACAGTAGTCTCCAAACCCATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATGTGGTAAAGCCTTTTCACGTCACAGTAGTCTCCAAACCCATAA  250

seq1  AAGGCACCATACAGGAGAGAAGCCCTATGAATGTAATCACTGTGGTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACCATACAGGAGAGAAGCCCTATGAATGTAATCACTGTGGTGAAG  300

seq1  TCTTTGCATATCTCAGTAGTCTCCAGTACCACAAAAGGAATCATCTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCATATCTCAGTAGTCTCCAGTACCACAAAAGGAATCATCTGGGA  350

seq1  GAGGAACCCTATCCAGTTCTTTAACATGGTAAGGCCTTTGTGGATTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACCCTATCCAGTTCTTTAACATGGTAAGGCCTTTGTGGATTTCTG  400

seq1  TAGCCTTCATCATGAAGTATTCATACTGCAGAGAAACCATATGAATGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTCATCATGAAGTATTCATACTGCAGAGAAACCATATGAATGGAA  450

seq1  GAAATGTGGTAAAGCTTTTGTACATCACAGTTATCTCTTAATGTAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTGGTAAAGCTTTTGTACATCACAGTTATCTCTTAATGTAGAAAA  500

seq1  AACCAGATATTAGAAATTGTTATTTGAAGTGTTATCAAAGTGGTTCCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGATATTAGAAATTGTTATTTGAAGTGTTATCAAAGTGGTTCCATA  550

seq1  GCAGGATTTAATCTGGCAGTTTGGGAGAGTAAGCTAAGTTTGTATTTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATTTAATCTGGCAGTTTGGGAGAGTAAGCTAAGTTTGTATTTGCC  600

seq1  AGAACTGGAAAAGTGCCAAACAAGTCAATTCTACAAAAAAACCACCCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGGAAAAGTGCCAAACAAGTCAATTCTACAAAAAAACCACCCCTC  650

seq1  ATGGGCAGCCAATCAGGAGCTTTAGAAGCCACCCACCTAGCTTGAACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAGCCAATCAGGAGCTTTAGAAGCCACCCACCTAGCTTGAACCAT  700

seq1  ATATAGTTAATTATCAAAAATTCCCCAAACCCCCCAGAGCCTTAGCCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTAATTATCAAAAATTCCCCAAACCCCCCAGAGCCTTAGCCAAT  750

seq1  CACAGAGGCACCATACCCCTCAAGATAGAACCAACCAATCAAGAGAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGGCACCATACCCCTCAAGATAGAACCAACCAATCAAGAGAAAGA  800

seq1  AAGGTAAAAGCCACCCACTCCTAACCTAACAGTTTTTAAATTGACCCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAAAGCCACCCACTCCTAACCTAACAGTTTTTAAATTGACCCTGA  850

seq1  AAAGCCCACATCTCTGTCTTCCATCCTGGTATATGGATAACAATACAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCACATCTCTGTCTTCCATCCTGGTATATGGATAACAATACAGTT  900

seq1  ATGTCTGAATGCATAAAAGTAGATAGACTGGAGAGAAACTCTATGAATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGAATGCATAAAAGTAGATAGACTGGAGAGAAACTCTATGAATGT  950

seq1  AATCAGTGTGGTATAG-CCTTTGCATAACATGATCATCTTTGAATACATA  999
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  AATCAGTGTGGTATAGCCCTTTGCATAACATGATCATCTTTG-ATACATA  999

seq1  AAAAACATACTGTCGTGAAATTCTATGAACGTAATCAGTGTGATAAAGCT  1049
      ||||||||||||||||| ||||||||| |||||||||||||||| |||||
seq2  AAAAACATACTGTCGTG-AATTCTATG-ACGTAATCAGTGTGAT-AAGCT  1046

seq1  TTTGCATATCACA-TTCATCTTCAAAGCCATGAAA-GGATTT-ATACTAA  1096
      ||||||||||||| |||||| || ||||||||||| |||||| ||||  |
seq2  TTTGCATATCACATTTCATCCTCCAAGCCATGAAAGGGATTTAATACCTA  1096

seq1  AAAGAAGCACTA-TGAAGGTATTAAA-TATT--ATGAAGTCTTTGCACAT  1142
      |||| ||||||| ||||||||||||| ||||   ||||||| | ||||||
seq2  AAAG-AGCACTATTGAAGGTATTAAATTATTTATTGAAGTC-TGGCACAT  1144

seq1  CCCAGTTATG--ACTGAAT  1159
       |||||||||   ||||||
seq2  TCCAGTTATGGACCTGAAT  1163