BAC Information

Click to search

BAC

Clone NameB6Ng01-189O06
Chromosome7 (Build37)
Map Location 35,159,716 - 35,320,597
singlet/doubletdoublet
Overlap geneLsm14a, LOC668460, LOC668464
Upstream geneLOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734
Downstream geneKctd15, Chst8, Pepd, Cebpg, Cebpa, Slc7a10, Wdr88, Gpatch1, Rhpn2, C230052I12Rik, Ccdc123, Slc7a9, 2410004F06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189O06.bB6Ng01-189O06.g
ACCGA013791GA013792
length1,1171,099
definitionB6Ng01-189O06.b B6Ng01-189O06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,319,517 - 35,320,597)(35,159,716 - 35,160,806)
sequence
gaattctacagccgtgagccaaagtaaatcctttctcttttaaattgttt
tgctcaggcattgcatggtgatggagagctaacgcgccttctcggcctag
gcagccctcggcagcagcagctaactctagggagcaactgagcagttctt
tgctgtgaattctcatctggcctctctagagagaagtaagagcgccaggg
ctagaggtgcgtgggcccttcatcgggcaggcttgcctctgctcccatta
ctcactccataacacacagggtttgaaatacaaggggcagagatctaaag
agctgccaaggaggatactggtccaaggaagccacttggcaagccactct
gctggcccagactccaccctccaataggaactactaggctgaactttccc
aggagttattctctacacacacgtagctcaagatgaaccacaactgcttg
cagcaagcgttaagtgagaggtgggactttcaagaggtgcctgggttcca
agggctctgttgttgggagtgggttgatacatgtgggagtgagttaatcg
tgagaatcttccccctgctcagaccctctctctgacctatgctcacttgc
cttccatcccgctatgacgtagcaagggatcccttggcagatgtcaaact
catgcttactcctttctttaaaattacctagtgcctggtattctgcaata
gccacagaagaaagaccaagagacttgttttgtgaagtattggatgccaa
agagctcagctcatgagggtagcccagtaattagacacaaagactctgtc
tctttcatctctgtgtgtctgagctttgacagaaaagctgcccaccgaaa
tcgtgtttctttcataatttttattcccttatgccctttggaccagtctt
gcacctccttttcacagtcctccgtattctgagtctacagaataaggaca
aaactctggttagcatcatttgaaggttattttttgggaatttatgctaa
taaattggtgaaggcttagaaaaagaaaaggcatgaaggaatttcttgaa
gtaccttgggaacttgaatcgattggtccaactgggtacaagaagcactt
tccttgccccttgcaga
gaattcagtactagcctagccaggcagtggtggcgcatacctttaatccc
tgcacttgggaggcagaggcagaggcaggagaatttctgagtttgaggct
agcctggtctacagagtgagttccaggacagccagggctacacagagaaa
ccctgtcttgaaaaaccaaaaaaaaaaaaaaaaaaaaccaaaaaaaaaaa
aaccccacaaataaaacaaacaaaaacccaaaacaaaaacccaaaacaac
aacaaaacaagtcttacacagttaactttcaataaatgctagccattgta
acaatgtagtagtgttgaaactagaaaatattataaaatttatttaaatt
ctccagttacttatcagtttcaacttaagatccccaaagaaacttataga
agaacattactcaagtcattttatgtattcaagtaacttctaattagtat
gttacatgaaggttcaggaaaggcaaaagccaagcctaacgaggtgtaac
tgtgcctctgaaaggcaatttgcttcagttacctgaacaatagccgggtc
ctgaggcaaagaacattgtggtttgggtggctcacaaacagtgaggtctt
taatatcactcccgcggaatataatatattcaaagacttcatctcgaggc
ggtattggacgatctgttggtctgtcttctgtaccgaaggatcgaactgg
taagaaaagagaagacatgagacacatgtttgctactcactatacaaata
tcaaccatcagttctcaaacaccgttcataagaaagtacttattaccata
tggtcaaatatttttaaaagagtaaaatagaacacattttgctcaatcaa
atcagcatgtattttcacttaaaagtctaggtgtcatgaaggttgtggtt
ctcacattttacttctatttttgggtggctgttgtggtaaaggtatggaa
aatgtcctttttttcaatggctattattttaggtgtttcatttaagcaaa
aataaaagatctgatcatttacatcataggtctggcgggggagggggtgg
caacattttcctaggtatatataactcaagtttaaggttaaggcagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_35319517_35320597
seq2: B6Ng01-189O06.b_46_1162 (reverse)

seq1  TCTGCAA-GGGCA--GGAAGTGC-TCTTG-ACCC-GTGGG--CCATCG-C  41
      ||||||| |||||  | |||||| ||||| |||| || ||  | ||||  
seq2  TCTGCAAGGGGCAAGGAAAGTGCTTCTTGTACCCAGTTGGACCAATCGAT  50

seq1  TCCAGTTCC--AGGTGCTTCA--GAATTCC-TCATGC--TTTC-TTTTCT  83
      || ||||||  |||| |||||   |||||| ||||||  |||| ||||||
seq2  TCAAGTTCCCAAGGTACTTCAAGAAATTCCTTCATGCCTTTTCTTTTTCT  100

seq1  -AGCC-TCA-CATTTTATTAGCATTAATTCC--AAAAATAAC--TC-AAT  125
       |||| ||| || ||||||||||| ||||||  |||||||||  || |||
seq2  AAGCCTTCACCAATTTATTAGCATAAATTCCCAAAAAATAACCTTCAAAT  150

seq1  GATGCTAA-CAGAGTTTTGT-CTTATTCTGTAGACTCAGAATACGGA-GA  172
      |||||||| ||||||||||| |||||||||||||||||||||||||| ||
seq2  GATGCTAACCAGAGTTTTGTCCTTATTCTGTAGACTCAGAATACGGAGGA  200

seq1  CTGTGAAA--GGGGTGCAAGACTGGTCCAAA-GGCATAA-GGAATAAAAA  218
      ||||||||  | ||||||||||||||||||| ||||||| ||||||||||
seq2  CTGTGAAAAGGAGGTGCAAGACTGGTCCAAAGGGCATAAGGGAATAAAAA  250

seq1  TTATGAAAGAAACACGA-TTCGGT-GGCAGCTTTTCTGTCAAAGCTCAGA  266
      ||||||||||||||||| |||||| |||||||||||||||||||||||||
seq2  TTATGAAAGAAACACGATTTCGGTGGGCAGCTTTTCTGTCAAAGCTCAGA  300

seq1  CACACAGAGATGAAAGAGACAGAGTCTTTGTGTCTAATTACT-GGCTACC  315
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CACACAGAGATGAAAGAGACAGAGTCTTTGTGTCTAATTACTGGGCTACC  350

seq1  CTCCTGAGCTGAGCTCTTTGGCATCCAATACTTCACAAAACAAGTCTCTT  365
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAGCTGAGCTCTTTGGCATCCAATACTTCACAAAACAAGTCTCTT  400

seq1  GGTCTTTCTTCTGTGGCTATTGCAGAATACCAGGCACTAGGTAA-TTTAA  414
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGTCTTTCTTCTGTGGCTATTGCAGAATACCAGGCACTAGGTAATTTTAA  450

seq1  AGAAAGGAGTAAGCATGAGTTTGACATCTGCCAAGGGATCCCTTGCTACG  464
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAGTAAGCATGAGTTTGACATCTGCCAAGGGATCCCTTGCTACG  500

seq1  TCATAGCGGGATGGAAGGCAAGTGAGCATAGGTCAGAGAGAGGGTCTGAG  514
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCGGGATGGAAGGCAAGTGAGCATAGGTCAGAGAGAGGGTCTGAG  550

seq1  CAGGGGGAAGATTCTCACGATTAACTCACTCCCACATGTATCAACCCACT  564
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGGAAGATTCTCACGATTAACTCACTCCCACATGTATCAACCCACT  600

seq1  CCCAACAACAGAGCCCTTGGAACCCAGGCACCTCTTGAAAGTCCCACCTC  614
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAACAGAGCCCTTGGAACCCAGGCACCTCTTGAAAGTCCCACCTC  650

seq1  TCACTTAACGCTTGCTGCAAGCAGTTGTGGTTCATCTTGAGCTACGTGTG  664
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAACGCTTGCTGCAAGCAGTTGTGGTTCATCTTGAGCTACGTGTG  700

seq1  TGTAGAGAATAACTCCTGGGAAAGTTCAGCCTAGTAGTTCCTATTGGAGG  714
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGAATAACTCCTGGGAAAGTTCAGCCTAGTAGTTCCTATTGGAGG  750

seq1  GTGGAGTCTGGGCCAGCAGAGTGGCTTGCCAAGTGGCTTCCTTGGACCAG  764
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTCTGGGCCAGCAGAGTGGCTTGCCAAGTGGCTTCCTTGGACCAG  800

seq1  TATCCTCCTTGGCAGCTCTTTAGATCTCTGCCCCTTGTATTTCAAACCCT  814
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCCTTGGCAGCTCTTTAGATCTCTGCCCCTTGTATTTCAAACCCT  850

seq1  GTGTGTTATGGAGTGAGTAATGGGAGCAGAGGCAAGCCTGCCCGATGAAG  864
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTATGGAGTGAGTAATGGGAGCAGAGGCAAGCCTGCCCGATGAAG  900

seq1  GGCCCACGCACCTCTAGCCCTGGCGCTCTTACTTCTCTCTAGAGAGGCCA  914
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACGCACCTCTAGCCCTGGCGCTCTTACTTCTCTCTAGAGAGGCCA  950

seq1  GATGAGAATTCACAGCAAAGAACTGCTCAGTTGCTCCCTAGAGTTAGCTG  964
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAATTCACAGCAAAGAACTGCTCAGTTGCTCCCTAGAGTTAGCTG  1000

seq1  CTGCTGCCGAGGGCTGCCTAGGCCGAGAAGGCGCGTTAGCTCTCCATCAC  1014
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCGAGGGCTGCCTAGGCCGAGAAGGCGCGTTAGCTCTCCATCAC  1050

seq1  CATGCAATGCCTGAGCAAAACAATTTAAAAGAGAAAGGATTTACTTTGGC  1064
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAATGCCTGAGCAAAACAATTTAAAAGAGAAAGGATTTACTTTGGC  1100

seq1  TCACGGCTGTAGAATTC  1081
      |||||||||||||||||
seq2  TCACGGCTGTAGAATTC  1117

seq1: chr7_35159716_35160806
seq2: B6Ng01-189O06.g_68_1166

seq1  GAATTCAGTACTAGCCTAGCCAGGCAGTGGTGGCGCATACCTTTAATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACTAGCCTAGCCAGGCAGTGGTGGCGCATACCTTTAATCCC  50

seq1  TGCACTTGGGAGGCAGAGGCAGAGGCAGGAGAATTTCTGAGTTTGAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTGGGAGGCAGAGGCAGAGGCAGGAGAATTTCTGAGTTTGAGGCT  100

seq1  AGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAA  150

seq1  CCCTGTCTTGAAAAACCAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTTGAAAAACCAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAA  200

seq1  AACCCCACAAATAAAACAAACAAAAACCCAAAACAAAAACCCAAAACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCACAAATAAAACAAACAAAAACCCAAAACAAAAACCCAAAACAAC  250

seq1  AACAAAACAAGTCTTACACAGTTAACTTTCAATAAATGCTAGCCATTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAGTCTTACACAGTTAACTTTCAATAAATGCTAGCCATTGTA  300

seq1  ACAATGTAGTAGTGTTGAAACTAGAAAATATTATAAAATTTATTTAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTAGTAGTGTTGAAACTAGAAAATATTATAAAATTTATTTAAATT  350

seq1  CTCCAGTTACTTATCAGTTTCAACTTAAGATCCCCAAAGAAACTTATAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTTACTTATCAGTTTCAACTTAAGATCCCCAAAGAAACTTATAGA  400

seq1  AGAACATTACTCAAGTCATTTTATGTATTCAAGTAACTTCTAATTAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTACTCAAGTCATTTTATGTATTCAAGTAACTTCTAATTAGTAT  450

seq1  GTTACATGAAGGTTCAGGAAAGGCAAAAGCCAAGCCTAACGAGGTGTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATGAAGGTTCAGGAAAGGCAAAAGCCAAGCCTAACGAGGTGTAAC  500

seq1  TGTGCCTCTGAAAGGCAATTTGCTTCAGTTACCTGAACAATAGCCGGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTCTGAAAGGCAATTTGCTTCAGTTACCTGAACAATAGCCGGGTC  550

seq1  CTGAGGCAAAGAACATTGTGGTTTGGGTGGCTCACAAACAGTGAGGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCAAAGAACATTGTGGTTTGGGTGGCTCACAAACAGTGAGGTCTT  600

seq1  TAATATCACTCCCGCGGAATATAATATATTCAAAGACTTCATCTCGAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCACTCCCGCGGAATATAATATATTCAAAGACTTCATCTCGAGGC  650

seq1  GGTATTGGACGATCTGTTGGTCTGTCTTCTGTACCGAAGGATCGAACTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTGGACGATCTGTTGGTCTGTCTTCTGTACCGAAGGATCGAACTGG  700

seq1  TAAGAAAAGAGAAGACATGAGACACATGTTTGCTACTCACTATACAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAGAGAAGACATGAGACACATGTTTGCTACTCACTATACAAATA  750

seq1  TCAACCATCAGTTCTCAAACACCGTTCATAAGAAAGTACTTATTACCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCATCAGTTCTCAAACACCGTTCATAAGAAAGTACTTATTACCATA  800

seq1  TGGTCAAATATTTTTAAAAGAGTAAAATAGAACACATTTTGCTCAATCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAAATATTTTTAAAAGAGTAAAATAGAACACATTTTGCTCAATCAA  850

seq1  ATCAGCATGTA-TTTCACTTAAAAGTCTA-GTGTCATG-AGGTTGT-GTT  896
      ||||||||||| ||||||||||||||||| |||||||| ||||||| |||
seq2  ATCAGCATGTATTTTCACTTAAAAGTCTAGGTGTCATGAAGGTTGTGGTT  900

seq1  CTCACATTTTACTTCTATTTTT-GGTGGCTGTTTGTGGT-AAGGTAT-GA  943
      |||||||||||||||||||||| |||||||| ||||||| ||||||| ||
seq2  CTCACATTTTACTTCTATTTTTGGGTGGCTG-TTGTGGTAAAGGTATGGA  949

seq1  AAATGTCCTTTTTTTC-ATTGCTATTTATTTTTAGTGTTTTCATTT-AGC  991
      |||||||||||||||| || |||| |||||||  ||| |||||||| |||
seq2  AAATGTCCTTTTTTTCAATGGCTA-TTATTTTAGGTG-TTTCATTTAAGC  997

seq1  AAAA--TAAAGATCTGATCATTTACATCATAGTTCTTGCGGGG--AGGGG  1037
      ||||   ||||||||||||||||||||||||| ||| ||||||   ||||
seq2  AAAAATAAAAGATCTGATCATTTACATCATAGGTCTGGCGGGGGAGGGGG  1047

seq1  TGGCAACAATTTTCTA-GTATATAAAACTCAAAGTTTAAGTTTTAAGGCA  1086
      |||||||| ||| ||| ||||||| ||||| |||||||||  ||||||| 
seq2  TGGCAACATTTTCCTAGGTATATATAACTC-AAGTTTAAG-GTTAAGGC-  1094

seq1  AGAAG  1091
      |||||
seq2  AGAAG  1099