BAC Information

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BAC

Clone NameB6Ng01-192B01
Chromosome7 (Build37)
Map Location 123,337,850 - 123,338,846
singlet/doubletsinglet
Overlap genenone
Upstream geneSox6, LOC100042779, 1110006G14Rik, EG668479, LOC100043313, 1110004F10Rik, Plekha7
Downstream geneRps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192B01.bB6Ng01-192B01.g
ACCGA015398GA015399
length1,206998
definitionB6Ng01-192B01.b B6Ng01-192B01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagaccttcaaagaagacctaaaaccaatactctttaaact
attccacataatagaaacagaaggcacattacccaattcgttctatgaag
ccacaattatgcttatacccaaacaaagacccaacaaaaaaagagagctt
cagaccaatttcccttatgaatattaatgccaaaatactcaaaaaattct
cacaaaccaaatccaagaacacatcaaaacaatcatccatcgtgatcaag
taagcttcatcacagggatgcaggaatggtcaatatatggaaagtcacca
actgccacaccccctccagtagcgactcgagtgacaggcccaaaagcttg
gatgcagtcccagggtgaaaaattcacagaaacttagtctcctggaaccg
tggcatcctgtaaaacaaatgctccaaatctgtgcttgctttaatcagtg
aacggatctgtgtgctttccttcaatattgttttattataagtgcctcta
aggactgattttgacatatgaatttacaatggcctagggggaaggtggac
tatacaatagactagaattggaactaaggcaagggcatgaagcccttgcc
cctggcttctaagattaaactgaccttaggtggggctgcttttgatccca
gtagttaacattgatttttatcccagttggttcctgttagcttttatgta
cgcattcttctgttttgctataaaagtcattttgcatcagataacttcaa
agtaccttggatgaccttaatgtatcacttaacttccttgtcttccgtaa
tataaacctgatgctctctttgagaaattacattcagataccacactccc
ttgtgttcgcatctgtttgtcactttttcgcagactccctgcccacctgt
accaggaccctgattctcccgtggattgaggggccaactgagtccaatct
gcggcaatcaatgtaatccactatgtaaacaaacacaagacaaaaccaca
tgatcatctcattagatgctggaaagcatctgacaaaattcaacacccct
tcatggtaaagtcttgaaagatcagggattcagcccatactaacacaggt
aaggcatattacagcaaaccatagctatatcaacttactgggaagattga
acatccactaatccggaactagaacaaggcttggcccactttcttcccgt
aaccgt
gaattcaagggcaaccttggcaacttagtgagaccctgtctcaaagtaga
aagtaaaaagcaggctggcgacaccgttggttttttatgacagagcactt
gcttcctgtgcccagggccctaggtgcgatcccttgtgggggatgggctg
gggctgctgcgtgtatgtgggtcaaaggcaagcagatggagaaggtgagg
ggatgcagagcatctttgagaagaagccagtagtgctcacatgtgcacca
caggtggaagttaagatacagaaaggaacagagaacgactccggtgtttg
aggccattgctacgggaatacttgctttggggtgaaaagggtttattctc
cttttgttaaaacttagatgtctgtttattgttaccatagtcaagtctca
gtcaggttaaacattgagcaccttctgtatgctaagtgtatatgcccctt
tattttaacccttctttaaatgtcttaggaacatttgagaatcgcacttg
taatgccagaaccaaggcttggaagaggtgaggaagcttgctttaatctg
aacccagcttcagctccagctgtctggactgagtggttcccagtgttgaa
agagatgggttagtgctgagtggatagcttccccttgggggacaggatgg
ggccatatactggctcattcaggatcccctggctacgggaagaggggctg
tcagaggagtggctgtctgtagcgagctgttgtcaactgtggcatattta
aaattctgcaaacttgaaagaccattctgccacattatggtggcactttc
tgttaagtgaataaattagtaaagtgctaagcaaaataaaccaaaggagc
ttagaaatgcaaaggaggcactgcttcatctagcccaggctggcctagaa
ctcacagtggctgaggatcgcttggaactgctcttacctcctgagtgctg
ggactatggatgtgggccactagcctgtttatggggccttggggattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_123337850_123338846
seq2: B6Ng01-192B01.g_63_1060 (reverse)

seq1  CAATCCC--AAGCCCCATAAACAAGCTAGTGGCCCACATCCATAGTCCCA  48
      |||||||  | |||||||||||| ||||||||||||||||||||||||||
seq2  CAATCCCCAAGGCCCCATAAACAGGCTAGTGGCCCACATCCATAGTCCCA  50

seq1  GCACTCAGGAGGT-AGAGCAGTTCCAAGCGATCCTCAGCCACTTGTGAGT  97
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  GCACTCAGGAGGTAAGAGCAGTTCCAAGCGATCCTCAGCCAC-TGTGAGT  99

seq1  TCTAGGCCAGCCTGGGCTAGATG-AGCGGTGCCTCCTTTGCATTTCCTAA  146
      ||||||||||||||||||||||| ||| ||||||||||||||||| ||||
seq2  TCTAGGCCAGCCTGGGCTAGATGAAGCAGTGCCTCCTTTGCATTT-CTAA  148

seq1  GCTCCTTTGGTTTATTTTGCTTAGCACTTTTACTAATTTATTCACTTAAC  196
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCTCCTTTGGTTTATTTTGCTTAGCAC-TTTACTAATTTATTCACTTAAC  197

seq1  AGAAAGTGCCACCATAATGTGGCAGAATGGTCTTTCAAGTTTGCAGAATT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTGCCACCATAATGTGGCAGAATGGTCTTTCAAGTTTGCAGAATT  247

seq1  TTAAATATGCCACAGTTGACAACAGCTCGCTACAGACAGCCACTCCTCTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATGCCACAGTTGACAACAGCTCGCTACAGACAGCCACTCCTCTG  297

seq1  ACAGCCCCTCTTCCCGTAGCCAGGGGATCCTGAATGAGCCAGTATATGGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCCTCTTCCCGTAGCCAGGGGATCCTGAATGAGCCAGTATATGGC  347

seq1  CCCATCCTGTCCCCCAAGGGGAAGCTATCCACTCAGCACTAACCCATCTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCTGTCCCCCAAGGGGAAGCTATCCACTCAGCACTAACCCATCTC  397

seq1  TTTCAACACTGGGAACCACTCAGTCCAGACAGCTGGAGCTGAAGCTGGGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACACTGGGAACCACTCAGTCCAGACAGCTGGAGCTGAAGCTGGGT  447

seq1  TCAGATTAAAGCAAGCTTCCTCACCTCTTCCAAGCCTTGGTTCTGGCATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTAAAGCAAGCTTCCTCACCTCTTCCAAGCCTTGGTTCTGGCATT  497

seq1  ACAAGTGCGATTCTCAAATGTTCCTAAGACATTTAAAGAAGGGTTAAAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGCGATTCTCAAATGTTCCTAAGACATTTAAAGAAGGGTTAAAAT  547

seq1  AAAGGGGCATATACACTTAGCATACAGAAGGTGCTCAATGTTTAACCTGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGCATATACACTTAGCATACAGAAGGTGCTCAATGTTTAACCTGA  597

seq1  CTGAGACTTGACTATGGTAACAATAAACAGACATCTAAGTTTTAACAAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACTTGACTATGGTAACAATAAACAGACATCTAAGTTTTAACAAAA  647

seq1  GGAGAATAAACCCTTTTCACCCCAAAGCAAGTATTCCCGTAGCAATGGCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATAAACCCTTTTCACCCCAAAGCAAGTATTCCCGTAGCAATGGCC  697

seq1  TCAAACACCGGAGTCGTTCTCTGTTCCTTTCTGTATCTTAACTTCCACCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACCGGAGTCGTTCTCTGTTCCTTTCTGTATCTTAACTTCCACCT  747

seq1  GTGGTGCACATGTGAGCACTACTGGCTTCTTCTCAAAGATGCTCTGCATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCACATGTGAGCACTACTGGCTTCTTCTCAAAGATGCTCTGCATC  797

seq1  CCCTCACCTTCTCCATCTGCTTGCCTTTGACCCACATACACGCAGCAGCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACCTTCTCCATCTGCTTGCCTTTGACCCACATACACGCAGCAGCC  847

seq1  CCAGCCCATCCCCCACAAGGGATCGCACCTAGGGCCCTGGGCACAGGAAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCATCCCCCACAAGGGATCGCACCTAGGGCCCTGGGCACAGGAAG  897

seq1  CAAGTGCTCTGTCATAAAAAACCAACGGTGTCGCCAGCCTGCTTTTTACT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTCTGTCATAAAAAACCAACGGTGTCGCCAGCCTGCTTTTTACT  947

seq1  TTCTACTTTGAGACAGGGTCTCACTAAGTTGCCAAGGTTGCCCTTGAATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTTGAGACAGGGTCTCACTAAGTTGCCAAGGTTGCCCTTGAATT  997

seq1  C  997
      |
seq2  C  998