BAC Information

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BAC

Clone NameB6Ng01-192J15
Chromosome7 (Build37)
Map Location 48,464,326 - 48,465,510
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039094, 2900093B09Rik, 4930433I11Rik, EG233164, LOC668555, EG627987, LOC100039269, LOC545955
Downstream geneEG628304, LOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175, LOC100039556, EG637898
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192J15.bB6Ng01-192J15.g
ACCGA015802GA015803
length1,179847
definitionB6Ng01-192J15.b B6Ng01-192J15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacaagaaggaagaaggtacaggaactgtcacactcctttcagg
tggggacaaagagagaaggcagccagcctgggtagctcacaaccttgata
ctaaaaacagggagacaaacacaacaagaatgtccattgagtctgagggc
agacagtgatgtacagtgagatccagaacatgagctagataggaaatcct
aacacgggaaaacaaaagaagaggagagaaaaatactcagaaatagcaga
atatgggcagaagagcacgaaagtctgaataagggaacacatgcagccag
cctttcctttggctcctctgttctttacttataagggcagaacccacttt
acaagcatttgccagatgaaatgaagaccactgcttctggaagttcagtg
ctatcactcactaatgtaagaatgcaggatcaagctggtccaaggatcaa
agcctacagaggagagaagagaggtttgaggttaaccagggtcagaacaa
ctgaagaaaggactcctggagaagaaactgaagcattcataatctccaaa
accgtgcccttcaacacagttaaaatggtgctcttgatctcttcctttgg
tcatagacagatgctaacagctcacaactcagatcaactgaaaaggtttc
tcacctaagttgccccaacctatatgctcctctccttgctgctgtagggt
tctgtctgagtatacaatgggcactgaagggatataatcttttggaatat
tttacatcatatgtccattagaaagatcttcatcaatgaaccttatcaaa
agcactgccataaactcagaggctaaaagtcatgtcaagaggggctgcca
tgccaagattaactctttgatcagcacacaactcaggcttcatggatgaa
gctggtcttctggcatgcatcttctcgacccaatcctgtcttggagctca
gaatatgaccttccaattggctactgcttgatttatgacatcattcctcc
cctcccagcctaccagcacctagtagaatcctggggtttccatggagctg
cctgtaaccaatttgggatcatccacagttaccctatgacaagtgaacag
tggagcttgtctgtactgacacactcttctgttgtcagcagatcagacag
agacatttcagattgttcgtggtgtggat
gaattccttaaagaggaaacaaataaatttctctctctttttaaaaaaga
tttatttatttattatatgtaagtacactgtagctgtcttcagacacacc
agaagagggtgtcagatctcattatgggtggttgtgagccaccatgtggt
tgctgtgattttaaatcaggaccttcggaagagcagtcagtgctcttacc
cattgagccatctcgccagcccacaaataaatctcttaaagaaatagggg
aaaatacaatcaaacaggtgaaagaattgaacaaaattgttcaagagcta
aaaacagaaagagaaacaaatggaggcaaccctggagaaagaaaacctag
gaaagaaatcaggaactacagatgcaaccatcaccaactgagtacaattg
atggaagagagaatctcaagcatagaaggtatcataccacagaagatatc
aacatatcattcaacaaaattacaaattgtgaaaagttcctaatccataa
tatacaggaaatttgggacacaataaaaagaccaaacctaagaataatag
gaatagaaaacagtgaacattcacagtttgatgggtcagaaaacaacttc
aacaaaattataggaaaaaacttccataacctaaagaaagagatggccat
aaatgtaccaagaagcccacagaacaccaaatagattggaacacaaaaga
aaatcctccttccatataataccaaaaacactaaatttacagaacaagaa
acaatattaaaggacgtaagggggaaaggcccaagtaacatataaaaggc
agacctaccagaaatcacaccagacataacagagatgctaagaccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_48464326_48465510
seq2: B6Ng01-192J15.b_46_1224

seq1  GAATTCTACAAGAAGGAAGAAGGTACAGGAACTGTCACACTCCTTTCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAAGAAGGAAGAAGGTACAGGAACTGTCACACTCCTTTCAGG  50

seq1  TGGGGACAAAGAGAGAAGGCAGCCAGCCTGGGTAGCTCACAACCTTGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACAAAGAGAGAAGGCAGCCAGCCTGGGTAGCTCACAACCTTGATA  100

seq1  CTAAAAACAGGGAGACAAACACAACAAGAATGTCCATTGAGTCTGAGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAACAGGGAGACAAACACAACAAGAATGTCCATTGAGTCTGAGGGC  150

seq1  AGACAGTGATGTACAGTGAGATCCAGAACATGAGCTAGATAGGAAATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGATGTACAGTGAGATCCAGAACATGAGCTAGATAGGAAATCCT  200

seq1  AACACGGGAAAACAAAAGAAGAGGAGAGAAAAATACTCAGAAATAGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGGGAAAACAAAAGAAGAGGAGAGAAAAATACTCAGAAATAGCAGA  250

seq1  ATATGGGCAGAAGAGCACGAAAGTCTGAATAAGGGAACACATGCAGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGCAGAAGAGCACGAAAGTCTGAATAAGGGAACACATGCAGCCAG  300

seq1  CCTTTCCTTTGGCTCCTCTGTTCTTTACTTATAAGGGCAGAACCCACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTTTGGCTCCTCTGTTCTTTACTTATAAGGGCAGAACCCACTTT  350

seq1  ACAAGCATTTGCCAGATGAAATGAAGACCACTGCTTCTGGAAGTTCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCATTTGCCAGATGAAATGAAGACCACTGCTTCTGGAAGTTCAGTG  400

seq1  CTATCACTCACTAATGTAAGAATGCAGGATCAAGCTGGTCCAAGGATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCACTCACTAATGTAAGAATGCAGGATCAAGCTGGTCCAAGGATCAA  450

seq1  AGCCTACAGAGGAGAGAAGAGAGGTTTGAGGTTAACCAGGGTCAGAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACAGAGGAGAGAAGAGAGGTTTGAGGTTAACCAGGGTCAGAACAA  500

seq1  CTGAAGAAAGGACTCCTGGAGAAGAAACTGAAGCATTCATAATCTCCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAAAGGACTCCTGGAGAAGAAACTGAAGCATTCATAATCTCCAAA  550

seq1  ACCGTGCCCTTCAACACAGTTAAAATGGTGCTCTTGATCTCTTCCTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGCCCTTCAACACAGTTAAAATGGTGCTCTTGATCTCTTCCTTTGG  600

seq1  TCATAGACAGATGCTAACAGCTCACAACTCAGATCAACTGAAAAGGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGACAGATGCTAACAGCTCACAACTCAGATCAACTGAAAAGGTTTC  650

seq1  TCACCTAAGTTGCCCCAACCTATATGCTCCTCTCCTTGCTGCTGTAGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTAAGTTGCCCCAACCTATATGCTCCTCTCCTTGCTGCTGTAGGGT  700

seq1  TCTGTCTGAGTATACAATGGGCACTGAAGGGATATAATCTTTTGGAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGAGTATACAATGGGCACTGAAGGGATATAATCTTTTGGAATAT  750

seq1  TTTACATCATATGTCCATTAGAAAGATCTTCATCAATGAACCTTATCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATCATATGTCCATTAGAAAGATCTTCATCAATGAACCTTATCAAA  800

seq1  AGCACTGCCATAAACTCAGAGGCTAAAAGTCATGTCAAGAGGGGCTGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCCATAAACTCAGAGGCTAAAAGTCATGTCAAGAGGGGCTGCCA  850

seq1  TGCCAAGATTAACTCTTTGATCAGCACACAACTCAGGCTTCATGGATGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGATTAACTCTTTGATCAGCACACAACTCAGGCTTCATGGATGAA  900

seq1  GCTGGTCTTCTGGCATGCATCTTCTCGACCCAATCCTGTCTTGGAGCTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCTTCTGGCATGCATCTTCTCGACCCAATCCTGTCTTGGAGCTCA  950

seq1  GAATATGACCTTCCAATTGGCTACTGCTTGATTTATGACATCATTC--TC  998
      ||||||||||||||||||||||||||||||||||||||||||||||   |
seq2  GAATATGACCTTCCAATTGGCTACTGCTTGATTTATGACATCATTCCTCC  1000

seq1  CCTCCCAGCCTACCAGCACCTAGTAGAATCCTGGGGTTTCCATGGAGCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAGCCTACCAGCACCTAGTAGAATCCTGGGGTTTCCATGGAGCTG  1050

seq1  CCTGTAAACAAATTTGGATCAT-CACAGGTAACCTATGACCAGTGACCAG  1097
      ||||||| ||| || ||||||| ||||| || |||||||| ||||| |||
seq2  CCTGTAACCAATTTGGGATCATCCACAGTTACCCTATGACAAGTGAACAG  1100

seq1  T-GAGC-TGTCTGGTACTGAACACACTCTCTGGTTTGGTCAGCAGATCAG  1145
      | |||| ||||| |||||| |||||||||   |||  |||||||||||||
seq2  TGGAGCTTGTCT-GTACTG-ACACACTCTTCTGTT--GTCAGCAGATCAG  1146

seq1  ACAAAGAGAACCATTTTTTCAGATTGTTTCGT-GTGTGGAT  1185
      ||| ||| |       |||||||||| ||||| ||||||||
seq2  ACAGAGACA-------TTTCAGATTG-TTCGTGGTGTGGAT  1179