BAC Information

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BAC

Clone NameB6Ng01-192N09
Chromosome7 (Build37)
Map Location 69,937,094 - 70,068,693
singlet/doubletdoublet
Overlap geneEG622251
Upstream geneLOC100041293, Ndn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243
Downstream geneChrna7, Otud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192N09.bB6Ng01-192N09.g
ACCGA015969GA015970
length1,1181,073
definitionB6Ng01-192N09.b B6Ng01-192N09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,067,586 - 70,068,693)(69,937,094 - 69,938,155)
sequence
gaattctaatggttcctccccccccccccccaatcagggtaatgttctgt
taaatatccctgacccagtgtcatcactcgatctgaagaaggtaaatttg
gttagcaaaacttacaggaccagacattctagaaagtgcttagagaggcc
tgaaacactgtgcctgcctaggtagatattgcatctgctggtttctctgg
gacagaactcaagtttgttgcagattaccactggggtggtgcagatagtg
taagtcgaggtataattaggataactatacaattttggtaggatagtcct
gcactgaggattgccaggggctgggccctcaaccctaaatgcaagatcac
accacaccacacacacacacacacacacacacacacacacacacgcttct
gttcatctgtctgaaaccatcatgtctatggttgtgcctctgaaagcagt
catttttttgtgtataatttatcattttaaggtaaggaactttatttaag
aatatttaattgtggttttactggggaagaggggcagtttttgttgtttt
atccagtgaaccaacaccagtggcgttctacctactgaaaatgttgcaag
ctgtttgctgactctgaaagttcaaaggtaactgcagtagaccttactgt
taatttagattatgtagaagctaatcaatgtgtattgatttaaaaagcca
gagtccttgaaaaaaatcaatataaatatcattttcagtcctacttaatt
tgcatgatttgactacccccaatctcctacaattgttgttttaatcaatg
ttttgagtgctgtgtgttgttttcaacaaatgagttatgatttgaccaat
aatttaatatttttattaaaatctctgtattaatatatatgtatatatgt
acacacacacacacacacacacacacacacacacacacgttaggtttttt
ctgtttaagagccctggcctgttctgaacttttgtaagatcagaattggc
cttcaactcacaggaaaaatgccctgcttctgctcttctagtgatggaat
tataagaagtgctccacccactttcctggcttccatatattctattttga
tctggttctccttcctca
gaattcataatttaaaatttatacaataatgaaagctacactgatttact
tttctacaaatgtaaaacatgaatgccaaggctaaagagatagctcagca
gttatctgataagactttggttcccagcatccacattcagtttattacta
ctacctgtctataactccaactctgtgatgactctggcctttattaacac
tgaactcatgtattcatatgcagagcaaacacacacataaagcattaata
taacagtgaattatccttataattctctgattattaccagtcccacactc
tatgttaacccaagctccttacaaaaatattaatgaaaatatattaaatt
cacatgtggacatatgtatgtatttctgacttcagtgcttagaggcatag
acaggaaaatcgtgggggttcattgaacccagtctacccaactcagcaag
tttgaaggttggtggaaattcctgtatcaaaaaacaattgcagaaccata
gacaggcaccaggcattgacctcagtgttggttggtcacatctgcaaacc
tatgtagcatgtatatacacacacacacacacacacagagagagagagag
agagagagagagagagagagagagagagagagagagagagagagagagat
caccaactctgctttctaataatcaaatagtggcttctatatcagctgtg
tttacctgtgttgctaaccctgaaaaaagttagaagcctttaaagtctca
gttggttagttcctattgaaatgtaaataatgaaaatatccaataaaaaa
attaaatttatgtataaaattcaagattccctggctaccaatgtctgtct
ttggtgtaagtactgatctgccttaaaaataacacagcaagattttcttt
aaataaaataagttgaagtaaccttctatttaatatatattcatatttaa
catataatctactttattgttttaggtggttttacatataatctacttaa
tgtttaagtggccttttcttccataataattatgtggccatcattatgtg
gtggcctgtgaccccacagaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70067586_70068693
seq2: B6Ng01-192N09.b_41_1158 (reverse)

seq1  TGAGGGAGGAGAAAACAAGATCAAAATAGAATATAT-GAAGCCAGG-AAG  48
      ||||| |||||  ||| ||||||||||||||||||| ||||||||| |||
seq2  TGAGGAAGGAG--AACCAGATCAAAATAGAATATATGGAAGCCAGGAAAG  48

seq1  T-GGTGGAGCAC-TCTTATAATCCCATCACTAGAGAGGCAGAAGCA-GGC  95
      | |||||||||| ||||||||| |||||||||||   ||||||||| |||
seq2  TGGGTGGAGCACTTCTTATAATTCCATCACTAGAAGAGCAGAAGCAGGGC  98

seq1  ATTTT--CTGTGAGTTGAAGGCCAA-TCTGATC-TAC-AAAGTTCAGGAC  140
      |||||  |||||||||||||||||| ||||||| ||| ||||||||| ||
seq2  ATTTTTCCTGTGAGTTGAAGGCCAATTCTGATCTTACAAAAGTTCAGAAC  148

seq1  A-GCCAGGGCTCTTAAACAGAAAAACCCTGACGTGTGTGTGTGTGTGTGT  189
      | ||||||||||||||||||||||| ||| ||||||||||||||||||||
seq2  AGGCCAGGGCTCTTAAACAGAAAAAACCTAACGTGTGTGTGTGTGTGTGT  198

seq1  GTGTGTGTGTGTGTGTGTGTACATATATACATATATATTAATACAGAGAT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTACATATATACATATATATTAATACAGAGAT  248

seq1  TTTAAT-AAAATATTAAATTATTGGTCAAATCATAACTCATTTGTTGAAA  288
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAAAAATATTAAATTATTGGTCAAATCATAACTCATTTGTTGAAA  298

seq1  ACAACACACAGCACTCAAAACATTGATTAAAACAACAATTGTAGGAGATT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACACAGCACTCAAAACATTGATTAAAACAACAATTGTAGGAGATT  348

seq1  GGGGGTAGTCAAATCATGCAAATTAAGTAGGACTGAAAATGATATTTATA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTAGTCAAATCATGCAAATTAAGTAGGACTGAAAATGATATTTATA  398

seq1  TTGATTTTTTTCAAGGACTCTGGCTTTTTAAATCAATACACATTGATTAG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTTTCAAGGACTCTGGCTTTTTAAATCAATACACATTGATTAG  448

seq1  CTTCTACATAATCTAAATTAACAGTAAGGTCTACTGCAGTTACCTTTGAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACATAATCTAAATTAACAGTAAGGTCTACTGCAGTTACCTTTGAA  498

seq1  CTTTCAGAGTCAGCAAACAGCTTGCAACATTTTCAGTAGGTAGAACGCCA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGAGTCAGCAAACAGCTTGCAACATTTTCAGTAGGTAGAACGCCA  548

seq1  CTGGTGTTGGTTCACTGGATAAAACAACAAAAACTGCCCCTCTTCCCCAG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTTGGTTCACTGGATAAAACAACAAAAACTGCCCCTCTTCCCCAG  598

seq1  TAAAACCACAATTAAATATTCTTAAATAAAGTTCCTTACCTTAAAATGAT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCACAATTAAATATTCTTAAATAAAGTTCCTTACCTTAAAATGAT  648

seq1  AAATTATACACAAAAAAATGACTGCTTTCAGAGGCACAACCATAGACATG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATACACAAAAAAATGACTGCTTTCAGAGGCACAACCATAGACATG  698

seq1  ATGGTTTCAGACAGATGAACAGAAGCGTGTGTGTGTGTGTGTGTGTGTGT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCAGACAGATGAACAGAAGCGTGTGTGTGTGTGTGTGTGTGTGT  748

seq1  GTGTGTGTGTGTGGTGTGGTGTGATCTTGCATTTAGGGTTGAGGGCCCAG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGGTGTGGTGTGATCTTGCATTTAGGGTTGAGGGCCCAG  798

seq1  CCCCTGGCAATCCTCAGTGCAGGACTATCCTACCAAAATTGTATAGTTAT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGCAATCCTCAGTGCAGGACTATCCTACCAAAATTGTATAGTTAT  848

seq1  CCTAATTATACCTCGACTTACACTATCTGCACCACCCCAGTGGTAATCTG  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTATACCTCGACTTACACTATCTGCACCACCCCAGTGGTAATCTG  898

seq1  CAACAAACTTGAGTTCTGTCCCAGAGAAACCAGCAGATGCAATATCTACC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAACTTGAGTTCTGTCCCAGAGAAACCAGCAGATGCAATATCTACC  948

seq1  TAGGCAGGCACAGTGTTTCAGGCCTCTCTAAGCACTTTCTAGAATGTCTG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGGCACAGTGTTTCAGGCCTCTCTAAGCACTTTCTAGAATGTCTG  998

seq1  GTCCTGTAAGTTTTGCTAACCAAATTTACCTTCTTCAGATCGAGTGATGA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTAAGTTTTGCTAACCAAATTTACCTTCTTCAGATCGAGTGATGA  1048

seq1  CACTGGGTCAGGGATATTTAACAGAACATTACCCTGATTGGGGGGGGGGG  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGTCAGGGATATTTAACAGAACATTACCCTGATTGGGGGGGGGGG  1098

seq1  GGGAGGAACCATTAGAATTC  1108
      ||||||||||||||||||||
seq2  GGGAGGAACCATTAGAATTC  1118

seq1: chr7_69937094_69938155
seq2: B6Ng01-192N09.g_67_1139

seq1  GAATTCATAATTTAAAATTTATACAATAATGAAAGCTACACTGATTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAATTTAAAATTTATACAATAATGAAAGCTACACTGATTTACT  50

seq1  TTTCTACAAATGTAAAACATGAATGCCAAGGCTAAAGAGATAGCTCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACAAATGTAAAACATGAATGCCAAGGCTAAAGAGATAGCTCAGCA  100

seq1  GTTATCTGATAAGACTTTGGTTCCCAGCATCCACATTCAGTTTATTACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTGATAAGACTTTGGTTCCCAGCATCCACATTCAGTTTATTACTA  150

seq1  CTACCTGTCTATAACTCCAACTCTGTGATGACTCTGGCCTTTATTAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGTCTATAACTCCAACTCTGTGATGACTCTGGCCTTTATTAACAC  200

seq1  TGAACTCATGTATTCATATGCAGAGCAAACACACACATAAAGCATTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCATGTATTCATATGCAGAGCAAACACACACATAAAGCATTAATA  250

seq1  TAACAGTGAATTATCCTTATAATTCTCTGATTATTACCAGTCCCACACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTGAATTATCCTTATAATTCTCTGATTATTACCAGTCCCACACTC  300

seq1  TATGTTAACCCAAGCTCCTTACAAAAATATTAATGAAAATATATTAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAACCCAAGCTCCTTACAAAAATATTAATGAAAATATATTAAATT  350

seq1  CACATGTGGACATATGTATGTATTTCTGACTTCAGTGCTTAGAGGCATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGGACATATGTATGTATTTCTGACTTCAGTGCTTAGAGGCATAG  400

seq1  ACAGGAAAATCGTGGGGGTTCATTGAACCCAGTCTACCCAACTCAGCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAAATCGTGGGGGTTCATTGAACCCAGTCTACCCAACTCAGCAAG  450

seq1  TTTGAAGGTTGGTGGAAATTCCTGTATCAAAAAACAATTGCAGAACCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGTTGGTGGAAATTCCTGTATCAAAAAACAATTGCAGAACCATA  500

seq1  GACAGGCACCAGGCATTGACCTCAGTGTTGGTTGGTCACATCTGCAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCACCAGGCATTGACCTCAGTGTTGGTTGGTCACATCTGCAAACC  550

seq1  TATGTAGCATGTATATACACACACACACACACACAGAGAGAGAGAGAGAG  600
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATGTAGCATGTATATACACACACACACACACACACAGAGAGAGAGAGAG  600

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAT  650

seq1  CACCAACTCTGCTTTCTAATAATCAAATAGTGGCTTCTATATCAGCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACTCTGCTTTCTAATAATCAAATAGTGGCTTCTATATCAGCTGTG  700

seq1  TTTACCTGTGTTGCTAACCCTGAAAAAAGTTAGAAGCCTTTAAAGTCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTGTGTTGCTAACCCTGAAAAAAGTTAGAAGCCTTTAAAGTCTCA  750

seq1  GTTGGTTAGTTCCTATTGAAATGTAAATAATGAAAATATCCAATAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTAGTTCCTATTGAAATGTAAATAATGAAAATATCCAATAAAAAA  800

seq1  ATTAAATTTATGTATAAAATTCAAGATTCCCTGGCTACCAATGTCTGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTTATGTATAAAATTCAAGATTCCCTGGCTACCAATGTCTGTCT  850

seq1  TTGGTGTAAGTACTGATCTGCCTTAAAAATAACACAGCAAAGATTTTCTT  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTGGTGTAAGTACTGATCTGCCTTAAAAATAACACAGC-AAGATTTTCTT  899

seq1  TAAAT-AAATAAGTTGAAGT-ACCTTCTATTTAATATATATTCATATTTT  948
      ||||| |||||||||||||| |||||||||||||||||||||||||||| 
seq2  TAAATAAAATAAGTTGAAGTAACCTTCTATTTAATATATATTCATATTTA  949

seq1  ACATATAATCTACTT--ATGTTTTAGGTGGTTTTTACATATAATCTACTT  996
      |||||||||||||||   |||||||||||| |||||||||||||||||||
seq2  ACATATAATCTACTTTATTGTTTTAGGTGG-TTTTACATATAATCTACTT  998

seq1  -ATGTTTTAGGTGGCTTTTC-TCCAT-ATAAATATGTG--CATCA-TATG  1040
       |||||| ||  | |||||| ||||| |||| ||||||  ||||| ||||
seq2  AATGTTTAAGTGGCCTTTTCTTCCATAATAATTATGTGGCCATCATTATG  1048

seq1  TG--TGCCTG-GTACCCACAGAAGC  1062
      ||   ||||| |  |||||||||||
seq2  TGGTGGCCTGTGACCCCACAGAAGC  1073