BAC Information

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BAC

Clone NameB6Ng01-192N14
Chromosome7 (Build37)
Map Location 104,529,298 - 104,727,986
singlet/doubletdoublet
Overlap geneAlg8, Ndufc2, Thrsp, Kctd14, Ints4, 1810020D17Rik
Upstream geneOdz4, LOC666858, Nars2, Gab2, LOC100040457, Usp35, EG622320
Downstream geneRsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594, Pak1, Gdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192N14.bB6Ng01-192N14.g
ACCGA015979GA015980
length1,1381,082
definitionB6Ng01-192N14.b B6Ng01-192N14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,529,298 - 104,530,423)(104,726,910 - 104,727,986)
sequence
gaattcagactgcttttatcaggctctgtctggggttttgctataccttt
acttctgtggactaagaaccatatttagtccccttagcctgacatggcag
tgtgccctgcagtccaagctgcttagaagactgaggtaagtagttccttt
ggacctaagaattcagggccagtctgggcaagagcttaaggccaccctgt
agatggaactcagggttccacacactactcaagtgttctgaccattgcag
ttttgttttgttttgttttttaaaaatatatatatattatttttgaatag
gccgagtatggagagctggcctagaatgcaccaaggcctggatccaatct
ccagcacaagcgtgcacacaatacagtattatagagtctcactcatcctc
tgatcctacgcctctctggccaggttaactatattgtctctgctccttca
aatacagtttgtggttactgatgacataacccatatcttagcaccaggct
tgatgctagtatggatctgatgaagtaatgatttatttattattttgtgt
atatgtgttgttcctatgcgtttatgcgcaccaggtgtgtacaggtgccc
acagacatcagaggccatcagatcccctggaactagagttataggcaatg
gtgagccatcacgtgggtgctgagaatagaagcctggtcctttacaacag
cagaaaacactcttagctactgatccatctctccagcccctacttggaat
ttcctatacattattataaaaaatttaaatctctcagaaatagagaaaat
atacaacaatgatacacaggattcttttccaataaaatgatatggacaga
gctgtgtctggtttggtatgacatgcggccttttcacttagactgtgaac
actgaatggactagtcccatgaaggagtgggaacctgcctggtggtctgc
gtttggattgcttgggtttcagccctgcacctcagctcagtttcccactg
ggtgctttgcttcagttaggcacacttgaattcccttaacagagggctct
ggtgccagtgaaagtgtgtggattcaaggtgcgttgtttccatcttgttt
ttacaggaagatcccctaagggcctaagtacagctctt
gaattccaggcctggtggctgaaccgctgtggctcagagtccctcggcta
gctgcagggaaaggtgaagcacggatccgactggaggaacaaccgcgaac
agaagcgctgcgtgagttttctgcgggatctgggaacggagacgaccaag
agagagagacagagagggagttgaagagagacaccaagatgcagcaaaag
agaatggcagggaggagagaggttaggagaaggaaaggtgcggttgtggc
ttggcgcgggaccctggagagaagtctcagaaagtttgctgaggggtgtt
gccctctcctgagtgttgtgtgaccaaacttttcctggggggacggtaaa
cacatctcaccccagacagagctcccaccgacagaccgaagtacagataa
caccaaagtccaacttggcgaaccaatgcgttttattttaacaggagcat
ggataaggggtcacttacaggagcaggaatgactcagagacagctgcgac
cccagggcccaccccagcatgggtgacagattataaaaactgcacagcct
gcaggcagctcactgcgttggcatgtcctttccaagtgactctggtctga
acctcttccaggcagctcagctggcttctgctcctcccaggcagctggtc
ccatctcagagtcttctttgcagtgcagcttgtctgagaggctttttttt
tttttttttcagctcaacttcctttagtttgagagagacgatcacctttt
actgtttgctctgacagagagagacctaatgaatctggtttagtttcagg
gacttcctgaagctgttttgagttgttttactgtcctgtttaaagagctt
ccttgccagaatggaaccggtgggaccagggcctaaaggttctctgtgga
tcactaatgaaggaattgcctctgctgggtgaccaaattctgaggaacca
ctcctctactcgggaaactaagatgctaaagaagacttctgggctcagct
cagcttcttagtggcaggtctagaagggtgagctagatctacttagaaag
cttggagttcgctgcacagcagtagcttgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_104529298_104530423
seq2: B6Ng01-192N14.b_48_1185

seq1  GAATTCAGACTGCTTTTATCAGGCTCTGTCTGGGGTTTTGCTATACCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTGCTTTTATCAGGCTCTGTCTGGGGTTTTGCTATACCTTT  50

seq1  ACTTCTGTGGACTAAGAACCATATTTAGTCCCCTTAGCCTGACATGGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTGGACTAAGAACCATATTTAGTCCCCTTAGCCTGACATGGCAG  100

seq1  TGTGCCCTGCAGTCCAAGCTGCTTAGAAGACTGAGGTAAGTAGTTCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCTGCAGTCCAAGCTGCTTAGAAGACTGAGGTAAGTAGTTCCTTT  150

seq1  GGACCTAAGAATTCAGGGCCAGTCTGGGCAAGAGCTTAAGGCCACCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTAAGAATTCAGGGCCAGTCTGGGCAAGAGCTTAAGGCCACCCTGT  200

seq1  AGATGGAACTCAGGGTTCCACACACTACTCAAGTGTTCTGACCATTGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAACTCAGGGTTCCACACACTACTCAAGTGTTCTGACCATTGCAG  250

seq1  TTTTGTTTTGTTTTGTTTTTTAAAAATATATATATATTATTTTTGAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTGTTTTTTAAAAATATATATATATTATTTTTGAATAG  300

seq1  GCCGAGTATGGAGAGCTGGCCTAGAATGCACCAAGGCCTGGATCCAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGTATGGAGAGCTGGCCTAGAATGCACCAAGGCCTGGATCCAATCT  350

seq1  CCAGCACAAGCGTGCACACAATACAGTATTATAGAGTCTCACTCATCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACAAGCGTGCACACAATACAGTATTATAGAGTCTCACTCATCCTC  400

seq1  TGATCCTACGCCTCTCTGGCCAGGTTAACTATATTGTCTCTGCTCCTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTACGCCTCTCTGGCCAGGTTAACTATATTGTCTCTGCTCCTTCA  450

seq1  AATACAGTTTGTGGTTACTGATGACATAACCCATATCTTAGCACCAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGTTTGTGGTTACTGATGACATAACCCATATCTTAGCACCAGGCT  500

seq1  TGATGCTAGTATGGATCTGATGAAGTAATGATTTATTTATTATTTTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTAGTATGGATCTGATGAAGTAATGATTTATTTATTATTTTGTGT  550

seq1  ATATGTGTTGTTCCTATGCGTTTATGCGCACCAGGTGTGTACAGGTGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTTGTTCCTATGCGTTTATGCGCACCAGGTGTGTACAGGTGCCC  600

seq1  ACAGACATCAGAGGCCATCAGATCCCCTGGAACTAGAGTTATAGGCAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATCAGAGGCCATCAGATCCCCTGGAACTAGAGTTATAGGCAATG  650

seq1  GTGAGCCATCACGTGGGTGCTGAGAATAGAAGCCTGGTCCTTTACAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCATCACGTGGGTGCTGAGAATAGAAGCCTGGTCCTTTACAACAG  700

seq1  CAGAAAACACTCTTAGCTACTGATCCATCTCTCCAGCCCCTACTTGGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACACTCTTAGCTACTGATCCATCTCTCCAGCCCCTACTTGGAAT  750

seq1  TTCCTATACATTATTATAAAAAATTTAAATCTCTCAGAAATAGAGAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATACATTATTATAAAAAATTTAAATCTCTCAGAAATAGAGAAAAT  800

seq1  ATACAACAATGATACACAGGATTCTTTTCCAATAAAATGATATGGACAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACAATGATACACAGGATTCTTTTCCAATAAAATGATATGGACAGA  850

seq1  GCTGTGTCTGGTTTGGTATGACATGCGGCCTTTTCACTTAGACTGTGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTCTGGTTTGGTATGACATGCGGCCTTTTCACTTAGACTGTGAAC  900

seq1  ACTGAATGGACTAGTCCCATGAAGGAGTGGGAACCCTGCCT-GTGGTCTG  949
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  ACTGAATGGACTAGTCCCATGAAGGAGTGGGAA-CCTGCCTGGTGGTCTG  949

seq1  CGTTTGGATTGCTT-GGTTTCAGCCCTGCACCTCAGCTCAG-TTCCCACT  997
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  CGTTTGGATTGCTTGGGTTTCAGCCCTGCACCTCAGCTCAGTTTCCCACT  999

seq1  -GGTGCTTTGCTTCAG-TAGGCACAC-TGAATTCC--TTACAGAGGCTCC  1042
       ||||||||||||||| ||||||||| ||||||||  | |||||||   |
seq2  GGGTGCTTTGCTTCAGTTAGGCACACTTGAATTCCCTTAACAGAGGGCTC  1049

seq1  TGGTGCCAGTG-AAGT-TGTGGATTCCAGGTGCCGTGTTT-CATTCTGTT  1089
      ||||||||||| |||| ||||||||| ||||||  ||||| |||  ||||
seq2  TGGTGCCAGTGAAAGTGTGTGGATTCAAGGTGCGTTGTTTCCATCTTGTT  1099

seq1  TTTACA-GAAGATCCCCTAA-GGCTTAGTTACAGCTCTT  1126
      |||||| ||||||||||||| ||| ||  ||||||||||
seq2  TTTACAGGAAGATCCCCTAAGGGCCTAAGTACAGCTCTT  1138

seq1: chr7_104726910_104727986
seq2: B6Ng01-192N14.g_70_1151 (reverse)

seq1  TAACAAGCTTACTGCTGTGCAGCGAACTCCCAGCTTTCTAAGTAGAATCC  50
      |||||||| ||||||||||||||||||||| |||||||||||||||   |
seq2  TAACAAGC-TACTGCTGTGCAGCGAACTCCAAGCTTTCTAAGTAGA--TC  47

seq1  TAGCTCACCC-TCTAGACCTTGGCCAACTTAGAGCCTGAGCTGAGCCCAG  99
      |||||||||| |||||||||  ||| ||| |||  |||||||||||||||
seq2  TAGCTCACCCTTCTAGACCT--GCC-ACTAAGAAGCTGAGCTGAGCCCAG  94

seq1  -AGTCTTC-TTAGCATCTTAG-TTCCCGAGTAGA-GAGTGGTTCCTCAG-  144
       ||||||| |||||||||||| |||||||||||| |||||||||||||| 
seq2  AAGTCTTCTTTAGCATCTTAGTTTCCCGAGTAGAGGAGTGGTTCCTCAGA  144

seq1  ATTTGGTCACCCAGCAGAGGCAATTCC-TCATTAGTGATCCACAGAGTAC  193
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  ATTTGGTCACCCAGCAGAGGCAATTCCTTCATTAGTGATCCACAGAGAAC  194

seq1  C-TTAGGCCCTGGT-CCACCGGTTCCA-TCTGGCAAGGAAGCTCTTTAAA  240
      | |||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  CTTTAGGCCCTGGTCCCACCGGTTCCATTCTGGCAAGGAAGCTCTTTAAA  244

seq1  CAGGACAGTAAAACAACTCAAAACAGCTTCAGGAAGTCCCTGAAACT-AA  289
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGGACAGTAAAACAACTCAAAACAGCTTCAGGAAGTCCCTGAAACTAAA  294

seq1  CCAGATTCATTAGGTCTCTCTCTGTCAGAGCAAACAGTAAAAGGTGATCG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTCATTAGGTCTCTCTCTGTCAGAGCAAACAGTAAAAGGTGATCG  344

seq1  TCTCTCTCAAACTAAAGGAAGTTGAGCTGAAAAAAAAAAAAAAAAAGCCT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCAAACTAAAGGAAGTTGAGCTGAAAAAAAAAAAAAAAAAGCCT  394

seq1  CTCAGACAAGCTGCACTGCAAAGAAGACTCTGAGATGGGACCAGCTGCCT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACAAGCTGCACTGCAAAGAAGACTCTGAGATGGGACCAGCTGCCT  444

seq1  GGGAGGAGCAGAAGCCAGCTGAGCTGCCTGGAAGAGGTTCAGACCAGAGT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGCAGAAGCCAGCTGAGCTGCCTGGAAGAGGTTCAGACCAGAGT  494

seq1  CACTTGGAAAGGACATGCCAACGCAGTGAGCTGCCTGCAGGCTGTGCAGT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGAAAGGACATGCCAACGCAGTGAGCTGCCTGCAGGCTGTGCAGT  544

seq1  TTTTATAATCTGTCACCCATGCTGGGGTGGGCCCTGGGGTCGCAGCTGTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATCTGTCACCCATGCTGGGGTGGGCCCTGGGGTCGCAGCTGTC  594

seq1  TCTGAGTCATTCCTGCTCCTGTAAGTGACCCCTTATCCATGCTCCTGTTA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCATTCCTGCTCCTGTAAGTGACCCCTTATCCATGCTCCTGTTA  644

seq1  AAATAAAACGCATTGGTTCGCCAAGTTGGACTTTGGTGTTATCTGTACTT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAACGCATTGGTTCGCCAAGTTGGACTTTGGTGTTATCTGTACTT  694

seq1  CGGTCTGTCGGTGGGAGCTCTGTCTGGGGTGAGATGTGTTTACCGTCCCC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCTGTCGGTGGGAGCTCTGTCTGGGGTGAGATGTGTTTACCGTCCCC  744

seq1  CCAGGAAAAGTTTGGTCACACAACACTCAGGAGAGGGCAACACCCCTCAG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAAAGTTTGGTCACACAACACTCAGGAGAGGGCAACACCCCTCAG  794

seq1  CAAACTTTCTGAGACTTCTCTCCAGGGTCCCGCGCCAAGCCACAACCGCA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTCTGAGACTTCTCTCCAGGGTCCCGCGCCAAGCCACAACCGCA  844

seq1  CCTTTCCTTCTCCTAACCTCTCTCCTCCCTGCCATTCTCTTTTGCTGCAT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTTCTCCTAACCTCTCTCCTCCCTGCCATTCTCTTTTGCTGCAT  894

seq1  CTTGGTGTCTCTCTTCAACTCCCTCTCTGTCTCTCTCTCTTGGTCGTCTC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGTCTCTCTTCAACTCCCTCTCTGTCTCTCTCTCTTGGTCGTCTC  944

seq1  CGTTCCCAGATCCCGCAGAAAACTCACGCAGCGCTTCTGTTCGCGGTTGT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCCAGATCCCGCAGAAAACTCACGCAGCGCTTCTGTTCGCGGTTGT  994

seq1  TCCTCCAGTCGGATCCGTGCTTCACCTTTCCCTGCAGCTAGCCGAGGGAC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGTCGGATCCGTGCTTCACCTTTCCCTGCAGCTAGCCGAGGGAC  1044

seq1  TCTGAGCCACAGCGGTTCAGCCACCAGGCCTGGAATTC  1077
      ||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCACAGCGGTTCAGCCACCAGGCCTGGAATTC  1082