BAC Information

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BAC

Clone NameB6Ng01-196D09
Chromosome7 (Build37)
Map Location 3,175,455 - 3,176,119
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041028, LOC627003, EG664817, Speer9-ps1, AU018091
Downstream geneLOC100041503, Nlrp12, GA_x5J8B7W3939-136239-135295, LOC384710, Myadm, Prkcc, Cacng7, LOC672553, Cacng8, Cacng6, LOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196D09.bB6Ng01-196D09.g
ACCGA018409GA018410
length675201
definitionB6Ng01-196D09.b B6Ng01-196D09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgaagtgggggggggagagtatgggggacttttgaagatatca
ttggaaatgtaattgaggaaaatatgtaataaaaaatattaaaaaaagaa
ctcctcttcctcttccaaatcaatcaactcctctgggctggggcgatggc
tcaggaagtaaaggcacttgttaatcccgacaacctgagctccaacacta
aggtgacttgtagaagctgtcatttgacttcccacatgggtgccttagca
agagcactaaggcacaaaataaataaatgtaattaaaaacaaaacagtta
agtctagttctcaggtattcaccagcttattacttagtcttttttttaaa
gtagactttagcagggctccatggtggtgcacatctttaattccagcatt
tgagagatagtggcatggggacctctgtgagtttaaggccagtctggtct
gggttaactgcataaaggaaccctgtctcaaacaaacaaacaaacaaaca
aacaaactaacaacatgcacacatacaaataaaaaatttttggctttatt
taaattttagttttaaaaaaattgtgtgtggttgtttctcttgaacatgt
ctgtctgtgtaccatgttttatgtagtgccagagaaggtgtttggggtct
ctaggacttgagagttacatcatgg
tttgttcagttctgagccccattttttaacattatgaactaaccagtacc
ccagagctcttgactctagctgcatatgtatcaaaagatggcctagtcgg
ccatcactggaaagagaggcccattggacacgcaaactttatatgcccca
ctacaggggaacgccagggccaaaaagggggagtgggtgggtaggggagt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_3175455_3176119
seq2: B6Ng01-196D09.b_48_722 (reverse)

seq1  CCATG-TGTAA--CTCCAGTCCTAGAGACCC--AACACCTTCTCTGGCAC  45
      ||||| |||||  ||| ||||||||||||||  |||||||||||||||||
seq2  CCATGATGTAACTCTCAAGTCCTAGAGACCCCAAACACCTTCTCTGGCAC  50

seq1  TACAT-AAACATGGTACACAGACAGACATGTTCAAGAGAAACAACCACAC  94
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAAACATGGTACACAGACAGACATGTTCAAGAGAAACAACCACAC  100

seq1  ACAATTTTTTT-AAACTAAAATTTAAATAAAGCCAAAA--TTTTTATTTG  141
      ||||||||||| ||||||||||||||||||||||||||  ||||||||||
seq2  ACAATTTTTTTAAAACTAAAATTTAAATAAAGCCAAAAATTTTTTATTTG  150

seq1  TATGTGTGCATGTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGAGA  191
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TATGTGTGCATGTTGTTAGTTTGTTTGTTTGTTTGTTTGTTTGTTTGAGA  200

seq1  CAGGGTTCCTTTATGCAGTTAACCCAGACCAGACTGGCCTTAAACTCACA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTCCTTTATGCAGTTAACCCAGACCAGACTGGCCTTAAACTCACA  250

seq1  GAGGTCCCCATGCCACTATCTCTCAAATGCTGGAATTAAAGATGTGCACC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCCCATGCCACTATCTCTCAAATGCTGGAATTAAAGATGTGCACC  300

seq1  ACCATGGAGCCCTGCTAAAGTCTACTTTAAAAAAAAGACTAAGTAATAAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGAGCCCTGCTAAAGTCTACTTTAAAAAAAAGACTAAGTAATAAG  350

seq1  CTGGTGAATACCTGAGAACTAGACTTAACTGTTTTGTTTTTAATTACATT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAATACCTGAGAACTAGACTTAACTGTTTTGTTTTTAATTACATT  400

seq1  TATTTATTTTGTGCCTTAGTGCTCTTGCTAAGGCACCCATGTGGGAAGTC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTGTGCCTTAGTGCTCTTGCTAAGGCACCCATGTGGGAAGTC  450

seq1  AAATGACAGCTTCTACAAGTCACCTTAGTGTTGGAGCTCAGGTTGTCGGG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACAGCTTCTACAAGTCACCTTAGTGTTGGAGCTCAGGTTGTCGGG  500

seq1  ATTAACAAGTGCCTTTACTTCCTGAGCCATCGCCCCAGCCCAGAGGAGTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACAAGTGCCTTTACTTCCTGAGCCATCGCCCCAGCCCAGAGGAGTT  550

seq1  GATTGATTTGGAAGAGGAAGAGGAGTTCTTTTTTTAATATTTTTTATTAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGATTTGGAAGAGGAAGAGGAGTTCTTTTTTTAATATTTTTTATTAC  600

seq1  ATATTTTCCTCAATTACATTTCCAATGATATC-CCAAAAGTCCCCCATAC  640
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  ATATTTTCCTCAATTACATTTCCAATGATATCTTCAAAAGTCCCCCATAC  650

seq1  TCTCCCCCCCCCACTTCAGGAATTC  665
      |||||||||||||||||||||||||
seq2  TCTCCCCCCCCCACTTCAGGAATTC  675