BAC Information

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BAC

Clone NameB6Ng01-196N06
Chromosome7 (Build37)
Map Location 81,275,778 - 81,276,816
singlet/doubletsinglet
Overlap genenone
Upstream gene4930429H19Rik, LOC665588, Rgma, Chd2, 1810026B05Rik, EG665610, LOC244061, A830073O21Rik, St8sia2, LOC100042127
Downstream geneLOC100042140, LOC546979, Slco3a1, EG665308, EG665641, 0610006L08Rik, Sv2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196N06.bB6Ng01-196N06.g
ACCGA018863GA018864
length4681,066
definitionB6Ng01-196N06.b B6Ng01-196N06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctgatctttccaatatttttatcatgaaggggtgttgaattttgtcaaat
gctttctcagcatctagtgagatgatcatgtagttttttttctttgagtt
tgtttatatagtagattatgttgatggatttctgtatgttgaaccacccc
tgcatctgtgggatgaagtctacttgatcatgatagatgatcgttttgat
gtgttcttggattcggtttgtgagaattttattgagtattttgttttgca
ttgatattcataaggaaaattggtctgaagttctctttctttgttgggtc
tttgtgtggtttaggtatcagagtaattgtggcgtcatagaatgaattgg
atagagtatcttctgtttctattttgtggaatagtttgaggagtattggt
attaggtcttctttgaaggtctgatagaactctgcactaaactcatctgg
ttcctgggctttttttgg

gaattctgttatgagttatgttcagagataccacgcgcctgctttttctt
ctagatgttagcttcagatgactgaatgccttaactgaaaggaatctttg
aaatctttgctacagtgccttcctttttctgccccctgcagtttttacct
tttgttgaatgctgggagtggaactctgaagatactggtttgaacaagct
aggcaactggcacaccactaagcagcatccccgattccctctgcattttc
agccactaaagacatttcttctctccacaagatgaggaaagaagatatct
caaaccaaagtaaatcaccaagaagggaccctgggcacaggttattctct
ctacccacaagttgcagttcaggaaaatgcaaatatgtactctgaaaagt
gtcacatctctattgagtttaaacagacttttgaaagttattgtgtccta
aacaatgtaacgagacaggtatagatatagtgtttatattgtctgaggtg
ttatgtgtaatcagaaaatatgtaaagcgtatatgagcacctataggagg
tgggtcaggttatatgtaaatgctttggcattttgtatgaggctcttgag
cacctgcagattttacattgtggaggagtgttctagaaccagtaccctga
agatactggtaaacatcatgctaagaagcttggaaaccaccctggacggt
gatcaaaggtacagatcactttgtgaatgcacagtcattttaaggaactt
aacaaggttcaacaactcaatctagagattgagttggtcccggtttggag
ctgaagcatggttctaatttgtatatgaggtaagtgattgtggaaggtgt
cttcacattgagagcaacttgcgtgggatttgttgcaaagtgctggattc
ttgccccatcttgtgtaactttcttaagcccaccacccccccccccccat
tggccagcaagcctaacctatggggtcattgaatgctggtctcttctgtg
gatgctcttagctacctttcacacttctgaatttgggagtgacacggcct
tggagcctgctgcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_81275778_81276816
seq2: B6Ng01-196N06.g_67_1132

seq1  GAATTCTGTTATGAGTTATGTTCAGAGATACCACGCGCCTGCTTTTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTATGAGTTATGTTCAGAGATACCACGCGCCTGCTTTTTCTT  50

seq1  CTAGATGTTAGCTTCAGATGACTGAATGCCTTAACTGAAAGGAATCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGTTAGCTTCAGATGACTGAATGCCTTAACTGAAAGGAATCTTTG  100

seq1  AAATCTTTGCTACAGTGCCTTCCTTTTTCTGCCCCCTGCAGTTTTTACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTGCTACAGTGCCTTCCTTTTTCTGCCCCCTGCAGTTTTTACCT  150

seq1  TTTGTTGAATGCTGGGAGTGGAACTCTGAAGATACTGGTTTGAACAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAATGCTGGGAGTGGAACTCTGAAGATACTGGTTTGAACAAGCT  200

seq1  AGGCAACTGGCACACCACTAAGCAGCATCCCCGATTCCCTCTGCATTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTGGCACACCACTAAGCAGCATCCCCGATTCCCTCTGCATTTTC  250

seq1  AGCCACTAAAGACATTTCTTCTCTCCACAAGATGAGGAAAGAAGATATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTAAAGACATTTCTTCTCTCCACAAGATGAGGAAAGAAGATATCT  300

seq1  CAAACCAAAGTAAATCACCAAGAAGGGACCCTGGGCACAGGTTATTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCAAAGTAAATCACCAAGAAGGGACCCTGGGCACAGGTTATTCTCT  350

seq1  CTACCCACAAGTTGCAGTTCAGGAAAATGCAAATATGTACTCTGAAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCACAAGTTGCAGTTCAGGAAAATGCAAATATGTACTCTGAAAAGT  400

seq1  GTCACATCTCTATTGAGTTTAAACAGACTTTTGAAAGTTATTGTGTCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATCTCTATTGAGTTTAAACAGACTTTTGAAAGTTATTGTGTCCTA  450

seq1  AACAATGTAACGAGACAGGTATAGATATAGTGTTTATATTGTCTGAGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTAACGAGACAGGTATAGATATAGTGTTTATATTGTCTGAGGTG  500

seq1  TTATGTGTAATCAGAAAATATGTAAAGCGTATATGAGCACCTATAGGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTAATCAGAAAATATGTAAAGCGTATATGAGCACCTATAGGAGG  550

seq1  TGGGTCAGGTTATATGTAAATGCTTTGGCATTTTGTATGAGGCTCTTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCAGGTTATATGTAAATGCTTTGGCATTTTGTATGAGGCTCTTGAG  600

seq1  CACCTGCAGATTTTACATTGTGGAGGAGTGTTCTAGAACCAGTACCCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCAGATTTTACATTGTGGAGGAGTGTTCTAGAACCAGTACCCTGA  650

seq1  AGATACTGGTAAACATCATGCTAAGAAGCTTGGAAACCACCCTGGACGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTGGTAAACATCATGCTAAGAAGCTTGGAAACCACCCTGGACGGT  700

seq1  GATCAAAGGTACAGATCACTTTGTGAATGCACAGTCATTTTAAGGAACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAAGGTACAGATCACTTTGTGAATGCACAGTCATTTTAAGGAACTT  750

seq1  AACAAGGTTCAACAACTCAATCTAGAGATTGAGTTGGTCCCGG-TTGGAG  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACAAGGTTCAACAACTCAATCTAGAGATTGAGTTGGTCCCGGTTTGGAG  800

seq1  CTGAAGCATGGTTCTAATTTGTATATGAGGTAAGTGATTGTGGAAGGTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCATGGTTCTAATTTGTATATGAGGTAAGTGATTGTGGAAGGTGT  850

seq1  C-TCACATTGAGAGCAAC-TGCGTGGGAATTTGTGCAAAGTGCTGGATTC  897
      | |||||||||||||||| ||||||||| ||  |||||||||||||||||
seq2  CTTCACATTGAGAGCAACTTGCGTGGGATTTGTTGCAAAGTGCTGGATTC  900

seq1  TTGCCCCATC-TGTGTAAC-TTCTTAAGCCCACCACCCCCCCCCCC---A  942
      |||||||||| |||||||| ||||||||||||||||||||||||||    
seq2  TTGCCCCATCTTGTGTAACTTTCTTAAGCCCACCACCCCCCCCCCCCCAT  950

seq1  TGGCCAGC-AGGCTAAGCTAT-GGGTCAT--GATGCTGGTCTC--CTG-G  985
      |||||||| || |||| |||| |||||||   |||||||||||  ||| |
seq2  TGGCCAGCAAGCCTAACCTATGGGGTCATTGAATGCTGGTCTCTTCTGTG  1000

seq1  GA--GTCTCAGC-ACCTTTCA-AC-TCTGAATT--GGAGTGACA--GCCT  1026
      ||   ||| ||| |||||||| || ||||||||  |||||||||  ||||
seq2  GATGCTCTTAGCTACCTTTCACACTTCTGAATTTGGGAGTGACACGGCCT  1050

seq1  --GAG-CTGCTGCTTT  1039
        ||| ||||||||||
seq2  TGGAGCCTGCTGCTTT  1066


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