BAC Information

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BAC

Clone NameB6Ng01-197G20
Chromosome7 (Build37)
Map Location 83,432,124 - 83,577,467
singlet/doubletdoublet
Overlap geneEG244071
Upstream gene1500012K07Rik, LOC100042171, Akap13, Klhl25, LOC100042210, LOC434200
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197G20.bB6Ng01-197G20.g
ACCGA019295GA019296
length1,121849
definitionB6Ng01-197G20.b B6Ng01-197G20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,432,124 - 83,433,235)(83,576,624 - 83,577,467)
sequence
gaattcccttggaatctagctctgccagaagcaaaacactgagtgaacta
agctctgggtcttttctggaatgtctatattggatttgggtcttttctgg
aatgtctttgttgagctccatgttatactttaaggtaaagaagcagggaa
attgtgaccgtttcagagcaactttaccactgaataatagataaacacct
gcctagcatatcagataaggaagactccaggctatatcttaactgcttaa
agaaaaaaagtgaagaaaaagcaactgctagtgcacaatgacacagtatg
acacagtgagaatcctaaaaatatccttcttggggaatgtttacgctgtt
ctctaggtggtgttgtgacatccatcatgctgctaatcccatgatccagg
tgagcactgtgaagtcacagtggtggattgaaactgcgaagatataattt
taacagtggcattttcttcactcttgtctagacctgtctgtaaagcgcag
gaccactaggttgtgctagagtataaacccagtatgcatgctttcctgct
aaatcttttcattattgactgtttcttttatccttgcacattttaaagaa
acattagagttttctattctctgtggcttggaagaacatgcaaacacccc
tgtgttcactgttctctgatgtgaaggacctgcaagtgacactgtttgat
ttggggaaaagtcaggggaagcggtatattgagaattatttacagttctg
ttgagatagacaatacctagtcatctcccaaatatctggtgtcctggtgt
gagaaccaaactattgctttgcttcagttggctcattctctacttgactt
acaggctctggaaagctagaagctgtatccatggtttctttgggttcatc
ttcccctcttctcctcttccctcatttctcttctcctcatctaccttctc
tctttcctcttctcttccttttttcttccttggtgcttttctcttccccc
aaccccttcgcacatcctccttttttctccgcccccctacctttctaata
cctttctctcccttccctatggcatcatttctatatcatatgaccctctg
atgctttggcatccttcgctt

gaattccatctcaagattcacatatgtcctcttttgtcactgctgtaata
actcatcctgtgaatgaaagaatggaagcttagaagagctagctgaccat
aaagcaaggaaatgctggctacaggatttgaacccagatttctctagcta
aagtgactgttctttcactgagcaatgagttctttccaaaggaatgactt
tgtcatcccaaaggggacttcacttcctaaagcttgagagtgcacaattt
cctttgtcaaagatgaaggaccaattctgatacttcagagaacagtatca
aagtagattgcacccagaagtacattccatgcaatgttttccatacacac
tgccagttacactctcattttgcctgttgatgttgagacagctgtacagg
ctttcctgagaaatgttatcatccaggctgcatgataatggaaaaggctc
ataacaccaggggcaattctacctctggcatgacattagcttgctggatc
attgtgaggtttggggatttgggtgagggagaaagaaaagagaaagaaga
aaatagattgttatttgtatgttcttgcaaaacataaaaatagatactct
tttcttcttttagcttccttcttgctccccttaccaccactaaccacaaa
aggcagttgtatgggaaaggaactaatagcatcctgtcatactccctgtg
ctccttgtaatgttttcaatgtttataaaacgagtggtaggtgtatgaga
ggttgtcaatacttcccaactactaccactcaactttgcttgcttcagct
tctgttcacatagaaaacctggaaccatttcactctggggtgggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_83432124_83433235
seq2: B6Ng01-197G20.b_45_1165

seq1  GAATTCCCTTGGAATCTAGCTCTGCCAGAAGCAAAACACTGAGTGAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTGGAATCTAGCTCTGCCAGAAGCAAAACACTGAGTGAACTA  50

seq1  AGCTCTGGGTCTTTTCTGGAATGTCTATATTGGATTTGGGTCTTTTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGGGTCTTTTCTGGAATGTCTATATTGGATTTGGGTCTTTTCTGG  100

seq1  AATGTCTTTGTTGAGCTCCATGTTATACTTTAAGGTAAAGAAGCAGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTTTGTTGAGCTCCATGTTATACTTTAAGGTAAAGAAGCAGGGAA  150

seq1  ATTGTGACCGTTTCAGAGCAACTTTACCACTGAATAATAGATAAACACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGACCGTTTCAGAGCAACTTTACCACTGAATAATAGATAAACACCT  200

seq1  GCCTAGCATATCAGATAAGGAAGACTCCAGGCTATATCTTAACTGCTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGCATATCAGATAAGGAAGACTCCAGGCTATATCTTAACTGCTTAA  250

seq1  AGAAAAAAAGTGAAGAAAAAGCAACTGCTAGTGCACAATGACACAGTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAGTGAAGAAAAAGCAACTGCTAGTGCACAATGACACAGTATG  300

seq1  ACACAGTGAGAATCCTAAAAATATCCTTCTTGGGGAATGTTTACGCTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGAGAATCCTAAAAATATCCTTCTTGGGGAATGTTTACGCTGTT  350

seq1  CTCTAGGTGGTGTTGTGACATCCATCATGCTGCTAATCCCATGATCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGTGGTGTTGTGACATCCATCATGCTGCTAATCCCATGATCCAGG  400

seq1  TGAGCACTGTGAAGTCACAGTGGTGGATTGAAACTGCGAAGATATAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACTGTGAAGTCACAGTGGTGGATTGAAACTGCGAAGATATAATTT  450

seq1  TAACAGTGGCATTTTCTTCACTCTTGTCTAGACCTGTCTGTAAAGCGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTGGCATTTTCTTCACTCTTGTCTAGACCTGTCTGTAAAGCGCAG  500

seq1  GACCACTAGGTTGTGCTAGAGTATAAACCCAGTATGCATGCTTTCCTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTAGGTTGTGCTAGAGTATAAACCCAGTATGCATGCTTTCCTGCT  550

seq1  AAATCTTTTCATTATTGACTGTTTCTTTTATCCTTGCACATTTTAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTTCATTATTGACTGTTTCTTTTATCCTTGCACATTTTAAAGAA  600

seq1  ACATTAGAGTTTTCTATTCTCTGTGGCTTGGAAGAACATGCAAACACCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGAGTTTTCTATTCTCTGTGGCTTGGAAGAACATGCAAACACCCC  650

seq1  TGTGTTCACTGTTCTCTGATGTGAAGGACCTGCAAGTGACACTGTTTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCACTGTTCTCTGATGTGAAGGACCTGCAAGTGACACTGTTTGAT  700

seq1  TTGGGGAAAAGTCAGGGGAAGCGGTATATTGAGAATTATTTACAGTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAAAAGTCAGGGGAAGCGGTATATTGAGAATTATTTACAGTTCTG  750

seq1  TTGAGATAGACAATACCTAGTCATCTCCC-AATATCTGGTGTCCTGGTGT  799
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTGAGATAGACAATACCTAGTCATCTCCCAAATATCTGGTGTCCTGGTGT  800

seq1  GAGAACCAAACTATTGCTTTGCTTCAGTTGGCTCATTCTCTACTTGACTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCAAACTATTGCTTTGCTTCAGTTGGCTCATTCTCTACTTGACTT  850

seq1  ACAGGCTCTGGAAAGCTAGAAGCTGTAT-CATGGGTTCTTTGGGGTTCAT  898
      |||||||||||||||||||||||||||| ||||| |||||| ||||||||
seq2  ACAGGCTCTGGAAAGCTAGAAGCTGTATCCATGGTTTCTTT-GGGTTCAT  899

seq1  C-TCCCCTCTTCTCCTCTTCCCTCATTTCTCTTCTCCTCATCTACCTTCT  947
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTCTTCTCCTCTTCCCTCATTTCTCTTCTCCTCATCTACCTTCT  949

seq1  CTCTTTCCTCTTTCTCTTTCCTTTTTCTTCCTT-GTGCTTTTCTCTTCCC  996
      |||||||||| ||||||| | |||||||||||| ||||||||||||||||
seq2  CTCTTTCCTC-TTCTCTTCCTTTTTTCTTCCTTGGTGCTTTTCTCTTCCC  998

seq1  CCA--CCCTTCGCACAT-CTCC--TTTTCTCCGCCCCCCTACCTTTCTTA  1041
      |||  |||||||||||| ||||  |||||||||||||||||||||||| |
seq2  CCAACCCCTTCGCACATCCTCCTTTTTTCTCCGCCCCCCTACCTTTCTAA  1048

seq1  TACTTTTCTCTCCCTTCCCTATGGCATCATTTTCTATATCATAT--ACCT  1089
      ||| ||||||||||||||||||||||||| ||||||||||||||   |||
seq2  TACCTTTCTCTCCCTTCCCTATGGCATCA-TTTCTATATCATATGACCCT  1097

seq1  CTGATAGTTTGGCAT-CTTCGCTT  1112
      |||||  |||||||| ||||||||
seq2  CTGATGCTTTGGCATCCTTCGCTT  1121


seq1: chr7_83576624_83577467
seq2: B6Ng01-197G20.g_68_916 (reverse)

seq1  CCACCCCCA-CCCAGAGTG-AATGGTTCCAGG-TTTCTATGTGAACAGAA  47
      ||||||||| ||||||||| |||||||||||| |||||||||||||||||
seq2  CCACCCCCACCCCAGAGTGAAATGGTTCCAGGTTTTCTATGTGAACAGAA  50

seq1  GCTGAAGCAAGCAAAGTTGAGTGGTAGTAGTT-GGAAGTATTGACAACCT  96
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCTGAAGCAAGCAAAGTTGAGTGGTAGTAGTTGGGAAGTATTGACAACCT  100

seq1  CTCATACACCTACCACTCGTTTTATAAACATTG-AAACATTACAAGGAGC  145
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTCATACACCTACCACTCGTTTTATAAACATTGAAAACATTACAAGGAGC  150

seq1  ACAGGGAGTATGACAGGATGCTATTAGTTCCTTTCCCATACAACTGCCTT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAGTATGACAGGATGCTATTAGTTCCTTTCCCATACAACTGCCTT  200

seq1  TTGTGGTTAGTGGTGGTAAGGGGAGCAAGAAGGAAGCTAAAAGAAGAAAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTTAGTGGTGGTAAGGGGAGCAAGAAGGAAGCTAAAAGAAGAAAA  250

seq1  GAGTATCTATTTTTATGTTTTGCAAGAACATACAAATAACAATCTATTTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATCTATTTTTATGTTTTGCAAGAACATACAAATAACAATCTATTTT  300

seq1  CTTCTTTCTCTTTTCTTTCTCCCTCACCCAAATCCCCAAACCTCACAATG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCTCTTTTCTTTCTCCCTCACCCAAATCCCCAAACCTCACAATG  350

seq1  ATCCAGCAAGCTAATGTCATGCCAGAGGTAGAATTGCCCCTGGTGTTATG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCAAGCTAATGTCATGCCAGAGGTAGAATTGCCCCTGGTGTTATG  400

seq1  AGCCTTTTCCATTATCATGCAGCCTGGATGATAACATTTCTCAGGAAAGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTTCCATTATCATGCAGCCTGGATGATAACATTTCTCAGGAAAGC  450

seq1  CTGTACAGCTGTCTCAACATCAACAGGCAAAATGAGAGTGTAACTGGCAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACAGCTGTCTCAACATCAACAGGCAAAATGAGAGTGTAACTGGCAG  500

seq1  TGTGTATGGAAAACATTGCATGGAATGTACTTCTGGGTGCAATCTACTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGGAAAACATTGCATGGAATGTACTTCTGGGTGCAATCTACTTT  550

seq1  GATACTGTTCTCTGAAGTATCAGAATTGGTCCTTCATCTTTGACAAAGGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGTTCTCTGAAGTATCAGAATTGGTCCTTCATCTTTGACAAAGGA  600

seq1  AATTGTGCACTCTCAAGCTTTAGGAAGTGAAGTCCCCTTTGGGATGACAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGCACTCTCAAGCTTTAGGAAGTGAAGTCCCCTTTGGGATGACAA  650

seq1  AGTCATTCCTTTGGAAAGAACTCATTGCTCAGTGAAAGAACAGTCACTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTCCTTTGGAAAGAACTCATTGCTCAGTGAAAGAACAGTCACTTT  700

seq1  AGCTAGAGAAATCTGGGTTCAAATCCTGTAGCCAGCATTTCCTTGCTTTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGAAATCTGGGTTCAAATCCTGTAGCCAGCATTTCCTTGCTTTA  750

seq1  TGGTCAGCTAGCTCTTCTAAGCTTCCATTCTTTCATTCACAGGATGAGTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGCTAGCTCTTCTAAGCTTCCATTCTTTCATTCACAGGATGAGTT  800

seq1  ATTACAGCAGTGACAAAAGAGGACATATGTGAATCTTGAGATGGAATTC  844
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGCAGTGACAAAAGAGGACATATGTGAATCTTGAGATGGAATTC  849


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