BAC Information

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BAC

Clone NameB6Ng01-199J03
Chromosome7 (Build37)
Map Location 5,981,920 - 5,982,690
singlet/doubletsinglet
Overlap genenone
Upstream gene6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859
Downstream geneNlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199J03.bB6Ng01-199J03.g
ACCGA020869GA020870
length635942
definitionB6Ng01-199J03.b B6Ng01-199J03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatctgtagatcagaatggccttgaacatttttttttaaaggtt
tatttattattataaataagtacactgttgctgacttcagacacaccata
agagggcatcagatctcattacggatggttgtgagccaccatgtggttgc
tgggatttgaactcagggccttcggaagagcagtccgtgctcttactggc
tgggccatctggccagccccatggccttgaacttaagagatctgcttacc
tcacctcctgagtgctgggattaaaggcataagccaccatcacctagctt
taaatttttactacagttgctgagagctaaattaattgaacacagctgag
aggatcaattgacgatacacagtaaggaagtaattaaagggaaaaaaaaa
ccccactactccacattactgttagtgatctggcagcagaatcactgcaa
aaggcagagcccaggtacctgacattgtaaagagggcactcctacaaaga
acaggaagatgcccggagtcagtgacatggttccgtgggtaaaggtgctt
atctctatgcctaaggaccccagtgtgagtcctaggactcccactgaaca
gcaaagaatggactccttcaagctgtctttttttc
gaattcttatggcactttcttaaagagctaaaaatgagactaccatatgg
tctgaaacctgaggacctcagattctttgacttacaaggtagaagtgggc
aactgactccctcaagtccttctctgaactccacatgcacatgtgtatgt
gaatatatacacactaaataaagtattaaaattttgaaaagcacaagatg
aagagtctgaagaacagctgtttatatgaaaatataattgtagctaatgg
aggaaaaattagatggtaggatactgtcttagtcagtgtttctattcctg
gacaaaacatcatgaccaggaagcaagctggggaggaaagggtttattca
gcttacatttccacattgctgttcatcactgaaagaagtcaggactggaa
ctcaagcaggtcagggagcaggagctgatgcagaggccatggagggatgt
tctttactggcttgcttcccctggcttgctcagcctgctctcttatagag
ccaagactaccagcccagagatggtcccacccacagggggcctttccccc
ttgatcactaattgagaaagtgccttacagttggatctcatggaggcatt
tcctcaactgaagctcctttctctgtgataactccagctgtgtcaagttg
acacaaaactagccattgattcattttcctgaaaactgacactacccata
ctactcaacaagcaaaagactagctcatgcctacccagagacttcacccc
tatgtagattccagtgccttttgtaccagaaggtgttccttcggctacca
aaaattgtaacataaactccaatgcaaccacaaaaattttgacctaaaat
ctgtcctgctttcaaaattatgccatgacaatggtggcaacagatgttgt
tggaaggtaacccacagtttccattgtctgatttgacttaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_5981920_5982690
seq2: B6Ng01-199J03.g_64_835

seq1  GAATTCTTATGGCACTTTCTTAAAGAGCTAAAAATGAGACTACCATATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGGCACTTTCTTAAAGAGCTAAAAATGAGACTACCATATGG  50

seq1  TCTGAAACCTGAGGACCTCAGATTCTTTGACTTACAAGGTAGAAGTGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACCTGAGGACCTCAGATTCTTTGACTTACAAGGTAGAAGTGGGC  100

seq1  AACTGACTCCCTCAAGTCCTTCTCTGAACTCCACATGCACATGTGTATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACTCCCTCAAGTCCTTCTCTGAACTCCACATGCACATGTGTATGT  150

seq1  GAATATATACACACTAAATAAAGTATTAAAATTTTGAAAAGCACAAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATACACACTAAATAAAGTATTAAAATTTTGAAAAGCACAAGATG  200

seq1  AAGAGTCTGAAGAACAGCTGTTTATATGAAAATATAATTGTAGCTAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCTGAAGAACAGCTGTTTATATGAAAATATAATTGTAGCTAATGG  250

seq1  AGGAAAAATTAGATGGTAGGATACTGTCTTAGTCAGTGTTTCTATTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAATTAGATGGTAGGATACTGTCTTAGTCAGTGTTTCTATTCCTG  300

seq1  GACAAAACATCATGACCAGGAAGCAAGCTGGGGAGGAAAGGGTTTATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAACATCATGACCAGGAAGCAAGCTGGGGAGGAAAGGGTTTATTCA  350

seq1  GCTTACATTTCCACATTGCTGTTCATCACTGAAAGAAGTCAGGACTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACATTTCCACATTGCTGTTCATCACTGAAAGAAGTCAGGACTGGAA  400

seq1  CTCAAGCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGT  450

seq1  TCTTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCCTGCTCTCTTATAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCCTGCTCTCTTATAGAG  500

seq1  CCAAGACTACCAGCCCAGAGATGGTCCCACCCACAGGGGGCCTTTCCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACTACCAGCCCAGAGATGGTCCCACCCACAGGGGGCCTTTCCCCC  550

seq1  TTGATCACTAATTGAGAAAGTGCCTTACAGTTGGATCTCATGGAGGCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCACTAATTGAGAAAGTGCCTTACAGTTGGATCTCATGGAGGCATT  600

seq1  TCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTG  650

seq1  ACACAAAACTAGCCATTGATTCA-TTTCCTGAAAACTGACACTACCCATA  699
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACACAAAACTAGCCATTGATTCATTTTCCTGAAAACTGACACTACCCATA  700

seq1  CTACTCAACAAGCAAAAGACTAGCTCATGCCTACCCAGAGACTTCACCCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAACAAGCAAAAGACTAGCTCATGCCTACCCAGAGACTTCACCCC  750

seq1  TATGTAGATTCCAGTGCCTTTT  771
      ||||||||||||||||||||||
seq2  TATGTAGATTCCAGTGCCTTTT  772