BAC Information

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BAC

Clone NameB6Ng01-199P08
Chromosome7 (Build37)
Map Location 70,517,323 - 70,628,357
singlet/doubletdoublet
Overlap geneOtud7a
Upstream geneMagel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251, Chrna7
Downstream geneLOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199P08.bB6Ng01-199P08.g
ACCGA021151GA021152
length1,0301,128
definitionB6Ng01-199P08.b B6Ng01-199P08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,517,323 - 70,518,357)(70,627,235 - 70,628,357)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctttttttttttttaaagttgtattttattttattttctccttt
tttttttttgaaagcaagcactgtactactgaactgtattcccagcccaa
actctgatttttttttaaaatgtgtatgtgttcaccacctgtattagtca
gggttctctagagtcacagaacttatggatagtctctagataataaagga
atttattgatgacttacagtcggcagctcaattcccaacaatcgttcagt
cacagctgtgaatggaagtccaaggatctagcagttactcagtctcacgc
agcaagcaggcgaaggagcaggagcaagagctagactcccttcttccaat
gtccttatattgtctccagcaaaaggtgtagcccagattaaaggtgtgtt
ccaccacacctttaatcccagatgaaaggcatagcccagattaaaggtgt
gttccttaacttcggagattcaatcttctggaatccatagccactatggc
tcaagatcttcaaccaggatccagaataggatctcaagcctccagataag
ggtcactggtgagcctccattccgaattgtagttcattccaatatttgtc
aagttgacacaagaatagcacttacaccac
gaattccacagactgagccatgtttctttctaactcatccacttctctga
gtttctctctggtgctccagggattacttcaccgccatttcctttgagag
gatggacacttatttgtcccaattgttgggttggtctctgaatcacccac
attctttcagcctttttgctcatgtgtttcatttttccccaggctttgct
ttctctgtatgctaattaattttttagtccttagtcatcttggtgtggga
tcagcactttatggaaggatactatggaacgacttgaggaagtatgctga
aagagtatatggtcttgattgaatctatctgaaattttttctccctgact
gtgctccattttgctttgatctggaaacctctctccttctggtctggctt
ctttaaggactgggttggttagtaacaaggttcctattaccacaggtctt
ctaggcagcaatgaattaccaaaagagcccatatctccttctcctgattc
ctcttgggcaggtccttaagtaaggagccaggactaatacattagcatta
gtgggagaccatttggccactattttgttgcgtttgaacacctaatgaca
ttgaactctgttgtggcaaggggaaaggtactcattcacttaagcccttg
atagccccaatccacagagtatgtccaaaaattctttcttaaagagacac
atcattttactgactaatgaatcaaatgaagaatctgagggactcacaga
gagttgggagtgaaaatgcactacgcactgtgagatacgagtagaagatt
atacaagtcaaggcaagtttcctctcagagtgatgctgtctttgggacag
gaccagttggtactctgtaatttcttatgcttcccataaattctaatatt
caagtgtgtcccagcactatgttttgtacgggccaagttgtggatgggtg
aactgggctactttatttttcatctgtgttagttattgtttctgtctttt
caagaaatcataccttttatagacgaataaatgcctcctccacttttatc
ttgatttttatcatctctgggactactacaggatggtaagttagctccaa
gccatggtaactggccatgacaataata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70517323_70518357
seq2: B6Ng01-199P08.b_45_1074

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAAGGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAAGGGGGTTATTTGATT  50

seq1  TTCTGAGGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAGTCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAGTCTGTTGGTGGTCT  150

seq1  TTTTGTCTTATAGACAGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATAGACAGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200

seq1  TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT  250

seq1  CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCAC  300

seq1  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA  350

seq1  TCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGC  400

seq1  ATTCTTCTTTTTTTTTTTTTAAAGTTGTATTTTATTTTATTTTCTCCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTTTTTTTTTTTTTAAAGTTGTATTTTATTTTATTTTCTCCTTT  450

seq1  TTTTTTTTTGAAAGCAAGCACTGTACTACTGAACTGTATTCCCAGCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTGAAAGCAAGCACTGTACTACTGAACTGTATTCCCAGCCCAA  500

seq1  ACTCTGATTTTTTTTTAAAATGTGTATGTGTTCACCACCTGTATTAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGATTTTTTTTTAAAATGTGTATGTGTTCACCACCTGTATTAGTCA  550

seq1  GGGTTCTCTAGAGTCACAGAACTTATGGATAGTCTCTAGATAATAAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTCTAGAGTCACAGAACTTATGGATAGTCTCTAGATAATAAAGGA  600

seq1  ATTTATTGATGACTTACAGTCGGCAGCTCAATTCCCAACAATCGTTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTGATGACTTACAGTCGGCAGCTCAATTCCCAACAATCGTTCAGT  650

seq1  CACAGCTGTGAATGGAAGTCCAAGGATCTAGCAGTTACTCAGTCTCACGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTGTGAATGGAAGTCCAAGGATCTAGCAGTTACTCAGTCTCACGC  700

seq1  AGCAAGCAGGCGAAGGAGCAGGAGCAAGAGCTAGACTCCCTTCTTCCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCAGGCGAAGGAGCAGGAGCAAGAGCTAGACTCCCTTCTTCCAAT  750

seq1  GTCCTTATATTGTCTCCAGCAAAAGGTGTAGCCCAGATTAAAGGTGTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTATATTGTCTCCAGCAAAAGGTGTAGCCCAGATTAAAGGTGTGTT  800

seq1  CCACCACACCTTTAATCCCAGATGAAAGGCATAGCCCAGATTAAAGGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACACCTTTAATCCCAGATGAAAGGCATAGCCCAGATTAAAGGTGT  850

seq1  GTTCCTTAAC-TCGGAGATTCAATCTTCTGGAATCCATAGCCACTATGGC  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTAACTTCGGAGATTCAATCTTCTGGAATCCATAGCCACTATGGC  900

seq1  TCAAGATCTTCAAACCAGGATCCAGATAAGGATCTCCAAGCCTCCAGATA  949
      ||||||||||| ||||||||||||||  ||||||| ||||||||||||||
seq2  TCAAGATCTTC-AACCAGGATCCAGAATAGGATCT-CAAGCCTCCAGATA  948

seq1  AGGGTCACTGGTGAGCCTTCCAATTCCGAATTGTAGTTCATTCCAAATAT  999
      ||||||||||||||||||  | ||||||||||||||||||||||||   |
seq2  AGGGTCACTGGTGAGCCT--CCATTCCGAATTGTAGTTCATTCCAATATT  996

seq1  TGTCAAGTTGACAACCAGGAATAGCCACTACACCAC  1035
      |||||||||||||  || |||||||   ||||||||
seq2  TGTCAAGTTGACA--CAAGAATAGCACTTACACCAC  1030

seq1: chr7_70627235_70628357
seq2: B6Ng01-199P08.g_62_1189 (reverse)

seq1  TATTA-TGTCATGG-CAGTTCCCATGCCTTGGAGCT-ACCTACCATCCTG  47
      ||||| |||||||| ||||| ||||| ||||||||| || ||||||||||
seq2  TATTATTGTCATGGCCAGTTACCATGGCTTGGAGCTAACTTACCATCCTG  50

seq1  TAGTAGT-CCAGAGATGATAAAAACCAAGATAAAAGTGGAGGAGGCATTT  96
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  TAGTAGTCCCAGAGATGATAAAAATCAAGATAAAAGTGGAGGAGGCATTT  100

seq1  ATTCGTCTATTAAAGGTATGATTTC-TGAAAAGACAAGAAACAATAACTA  145
      |||||||||| |||||||||||||| ||||||||| ||||||||||||||
seq2  ATTCGTCTATAAAAGGTATGATTTCTTGAAAAGAC-AGAAACAATAACTA  149

seq1  ACACAGATGAAAAATAAAGTAG-CCAGTTCACCCATCCACAACTTGGCCC  194
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACACAGATGAAAAATAAAGTAGCCCAGTTCACCCATCCACAACTTGGCCC  199

seq1  GTACAAAACATAGTGCTGGGACACACTTGAATATTAGAATTTATGGGAAG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAACATAGTGCTGGGACACACTTGAATATTAGAATTTATGGGAAG  249

seq1  CATAAGAAATTACAGAGTACCAACTGGTCCTGTCCCAAAGACAGCATCAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGAAATTACAGAGTACCAACTGGTCCTGTCCCAAAGACAGCATCAC  299

seq1  TCTGAGAGGAAACTTGCCTTGACTTGTATAATCTTCTACTCGTATCTCAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAGGAAACTTGCCTTGACTTGTATAATCTTCTACTCGTATCTCAC  349

seq1  AGTGCGTAGTGCATTTTCACTCCCAACTCTCTGTGAGTCCCTCAGATTCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCGTAGTGCATTTTCACTCCCAACTCTCTGTGAGTCCCTCAGATTCT  399

seq1  TCATTTGATTCATTAGTCAGTAAAATGATGTGTCTCTTTAAGAAAGAATT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGATTCATTAGTCAGTAAAATGATGTGTCTCTTTAAGAAAGAATT  449

seq1  TTTGGACATACTCTGTGGATTGGGGCTATCAAGGGCTTAAGTGAATGAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACATACTCTGTGGATTGGGGCTATCAAGGGCTTAAGTGAATGAGT  499

seq1  ACCTTTCCCCTTGCCACAACAGAGTTCAATGTCATTAGGTGTTCAAACGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCCCCTTGCCACAACAGAGTTCAATGTCATTAGGTGTTCAAACGC  549

seq1  AACAAAATAGTGGCCAAATGGTCTCCCACTAATGCTAATGTATTAGTCCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATAGTGGCCAAATGGTCTCCCACTAATGCTAATGTATTAGTCCT  599

seq1  GGCTCCTTACTTAAGGACCTGCCCAAGAGGAATCAGGAGAAGGAGATATG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTTACTTAAGGACCTGCCCAAGAGGAATCAGGAGAAGGAGATATG  649

seq1  GGCTCTTTTGGTAATTCATTGCTGCCTAGAAGACCTGTGGTAATAGGAAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTTTGGTAATTCATTGCTGCCTAGAAGACCTGTGGTAATAGGAAC  699

seq1  CTTGTTACTAACCAACCCAGTCCTTAAAGAAGCCAGACCAGAAGGAGAGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTACTAACCAACCCAGTCCTTAAAGAAGCCAGACCAGAAGGAGAGA  749

seq1  GGTTTCCAGATCAAAGCAAAATGGAGCACAGTCAGGGAGAAAAAATTTCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCAGATCAAAGCAAAATGGAGCACAGTCAGGGAGAAAAAATTTCA  799

seq1  GATAGATTCAATCAAGACCATATACTCTTTCAGCATACTTCCTCAAGTCG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATTCAATCAAGACCATATACTCTTTCAGCATACTTCCTCAAGTCG  849

seq1  TTCCATAGTATCCTTCCATAAAGTGCTGATCCCACACCAAGATGACTAAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAGTATCCTTCCATAAAGTGCTGATCCCACACCAAGATGACTAAG  899

seq1  GACTAAAAAATTAATTAGCATACAGAGAAAGCAAAGCCTGGGGAAAAATG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAAAAATTAATTAGCATACAGAGAAAGCAAAGCCTGGGGAAAAATG  949

seq1  AAACACATGAGCAAAAAGGCTGAAAGAATGTGGGTGATTCAGAGACCAAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATGAGCAAAAAGGCTGAAAGAATGTGGGTGATTCAGAGACCAAC  999

seq1  CCAACAATTGGGACAAATAAGTGTCCATCCTCTCAAAGGAAATGGCGGTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAATTGGGACAAATAAGTGTCCATCCTCTCAAAGGAAATGGCGGTG  1049

seq1  AAGTAATCCCTGGAGCACCAGAGAGAAACTCAGAGAAGTGGATGAGTTAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATCCCTGGAGCACCAGAGAGAAACTCAGAGAAGTGGATGAGTTAG  1099

seq1  AAAGAAACATGGCTCAGTCTGTGGAATTC  1123
      |||||||||||||||||||||||||||||
seq2  AAAGAAACATGGCTCAGTCTGTGGAATTC  1128