BAC Information

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BAC

Clone NameB6Ng01-200P05
Chromosome7 (Build37)
Map Location 146,278,441 - 146,420,497
singlet/doubletdoublet
Overlap geneDpysl4, Stk32c, LOC100038956, Lrrc27
Upstream geneTcerg1l, LOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik
Downstream genePwwp2, Inpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200P05.bB6Ng01-200P05.g
ACCGA021861GA021862
length389849
definitionB6Ng01-200P05.b B6Ng01-200P05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,420,102 - 146,420,497)(146,278,441 - 146,279,288)
sequence
cgcatgcttgcagactgtggcagctgcttcaccacaggagatcaaaagtc
ttccaaagaaattcccgcagaaagaaatgcgtgatggcaagtccaggtga
tattcccccccccccccattaaagtcagacattacttgctttaaaaatta
aaggcacgtgttgggggtggggctcatctacacacatttactattacaga
aaaatataggcaagaaaaactcatccaaacaccttattctctatgaacaa
caacaaaaatgtaagtgcttgaaaattgggcaaccttttaggcccgggag
tcggtgactggggaaggttctcaccagctttacaagaaagcttcaaacac
acaaacaccatggaggcccggggggcgggggaggggggg
gaattctatgtggcatctgcagctcacagatgagtagggccaagacactg
gacttcctgactatagaacccttgacacttataagacactgttgtctgcc
tgctatggacccaaggccatctccttgggttccggtttccagagaatgag
agtcctcacactgatgtcctttggagcatagggcccgatgcctcctccac
ttgagtgtagtggagtccgctctccagcttgcagttggagcctcatatct
ctgagcagggtgtccgcagcgctgcctctccctgtcacaattgcctccta
atcagaaattgacatcacatgcaagtcattacctgggagggtgtccccat
ttttcccggggtgccccaggttatttctagctagtaaggggatagggccc
tggactgggtgggcttggggctgccttcagtccccaatggaccttcatca
gtcctggtcctgggagttcctgggcagattctagttgcccaagagttggg
aaggctcaggcttgctcttgattggacttcaatattatgggcattgcccc
ctccccctccccctcctaagtgtctgaggtcccagcccggagactaggat
tgcccctctcagagtgtcatgaacatgcactgtgaattgtggtgtgaagc
agggctcaggacctgtaggcaggtgacatgccagatgggccgagagtgga
ttccccagcatgccaggcctggctgcttctcctgaagagagaggatgggg
cgtaggcagcaagcccgttacactgttctgtgccttgcagagtgaagatc
tgcctgacaggtggtggtggtgattagaaggtccatactttccccatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_146420102_146420497
seq2: B6Ng01-200P05.b_49_443 (reverse)

seq1  CCCCCCCTCCCCCGCCCCCCGGGCCTCCATGGTGTTTGTGTGTTTGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCTCCCCCGCCCCCCGGGCCTCCATGGTGTTTGTGTGTTTGAAGC  50

seq1  TTTCTTGTAAAGCTGGTGAGAACCTTCCCCAGTCACCGACTCCCGGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTAAAGCTGGTGAGAACCTTCCCCAGTCACCGACTCCCGGGCCT  100

seq1  AAAAGGTTGCCCAATTTTCAAGCACTTACATTTTTGTTGTTGTTCATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTTGCCCAATTTTCAAGCACTTACATTTTTGTTGTTGTTCATAGA  150

seq1  GAATAAGGTGTTTGGATGAGTTTTTCTTGCCTATATTTTTCTGTAATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGGTGTTTGGATGAGTTTTTCTTGCCTATATTTTTCTGTAATAGT  200

seq1  AAATGTGTGTAGATGAGCCCCACCCCCAACACGTGCCTTTAATTTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTGTAGATGAGCCCCACCCCCAACACGTGCCTTTAATTTTTAAA  250

seq1  GCAAGTAATGTCTGACTTTAATGGGGGGGGGGGGGGAATATCACCTGGAC  300
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCAAGTAATGTCTGACTTTAAT-GGGGGGGGGGGGGAATATCACCTGGAC  299

seq1  TTGCCATCACGCATTTCTTTCTGCGGGAATTTCTTTGGAAGACTTTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATCACGCATTTCTTTCTGCGGGAATTTCTTTGGAAGACTTTTGAT  349

seq1  CTCCTGTGGTGAAGCAGCTGCCACAGTCTGCAAGCATGCGGAATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTGGTGAAGCAGCTGCCACAGTCTGCAAGCATGCGGAATTC  395

seq1: chr7_146278441_146279288
seq2: B6Ng01-200P05.g_71_919

seq1  GAATTCTATGTGGCATCTGCAGCTCACAGATGAGTAGGGCCAAGACACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTGGCATCTGCAGCTCACAGATGAGTAGGGCCAAGACACTG  50

seq1  GACTTCCTGACTATAGAACCCTTGACACTTATAAGACACTGTTGTCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCTGACTATAGAACCCTTGACACTTATAAGACACTGTTGTCTGCC  100

seq1  TGCTATGGACCCAAGGCCATCTCCTTGGGTTCCGGTTTCCAGAGAATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGGACCCAAGGCCATCTCCTTGGGTTCCGGTTTCCAGAGAATGAG  150

seq1  AGTCCTCACACTGATGTCCTTTGGAGCATAGGGCCCGATGCCTCCTCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCACACTGATGTCCTTTGGAGCATAGGGCCCGATGCCTCCTCCAC  200

seq1  TTGAGTGTAGTGGAGTCCGCTCTCCAGCTTGCAGTTGGAGCCTCATATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGTAGTGGAGTCCGCTCTCCAGCTTGCAGTTGGAGCCTCATATCT  250

seq1  CTGAGCAGGGTGTCCGCAGCGCTGCCTCTCCCTGTCACAATTGCCTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAGGGTGTCCGCAGCGCTGCCTCTCCCTGTCACAATTGCCTCCTA  300

seq1  ATCAGAAATTGACATCACATGCAAGTCATTACCTGGGAGGGTGTCCCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAATTGACATCACATGCAAGTCATTACCTGGGAGGGTGTCCCCAT  350

seq1  TTTTCCCGGGGTGCCCCAGGTTATTTCTAGCTAGTAAGGGGATAGGGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCGGGGTGCCCCAGGTTATTTCTAGCTAGTAAGGGGATAGGGCCC  400

seq1  TGGACTGGGTGGGCTTGGGGCTGCCTTCAGTCCCCAATGGACCTTCATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGGGTGGGCTTGGGGCTGCCTTCAGTCCCCAATGGACCTTCATCA  450

seq1  GTCCTGGTCCTGGGAGTTCCTGGGCAGATTCTAGTTGCCCAAGAGTTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGTCCTGGGAGTTCCTGGGCAGATTCTAGTTGCCCAAGAGTTGGG  500

seq1  AAGGCTCAGGCTTGCTCTTGATTGGACTTCAATATTATGGGCATTGCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCAGGCTTGCTCTTGATTGGACTTCAATATTATGGGCATTGCCCC  550

seq1  CTCCCCCTCCCCCTCCTAAGTGTCTGAGGTCCCAGCCCGGAGACTAGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCTCCCCCTCCTAAGTGTCTGAGGTCCCAGCCCGGAGACTAGGAT  600

seq1  TGCCCCTCTCAGAGTGTCATGAACATGCACTGTGAATTGTGGTGTGAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTCTCAGAGTGTCATGAACATGCACTGTGAATTGTGGTGTGAAGC  650

seq1  AGGGCTCAGGACCTGTAGGCAGGTGACATGCCAGATGGGCCGAGAGTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCAGGACCTGTAGGCAGGTGACATGCCAGATGGGCCGAGAGTGGA  700

seq1  TTCCCCAGCATGCCAGGCCTGGCTGCTTCTCCTGAAGAGAGAGGATGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGCATGCCAGGCCTGGCTGCTTCTCCTGAAGAGAGAGGATGGGG  750

seq1  CGTAGGCAGCAAGCCCGTTACACTGTTCTGTGCCTTGCAGGAGTGAAGAT  800
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CGTAGGCAGCAAGCCCGTTACACTGTTCTGTGCCTTGCA-GAGTGAAGAT  799

seq1  CTGCCTGACAGGTGGTGGTGGTGA-TAGTAGGTCCATAC-TTCCCCATGT  848
      |||||||||||||||||||||||| ||| |||||||||| ||||||||||
seq2  CTGCCTGACAGGTGGTGGTGGTGATTAGAAGGTCCATACTTTCCCCATGT  849