BAC Information

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BAC

Clone NameB6Ng01-201B07
Chromosome7 (Build37)
Map Location 6,890,602 - 6,891,710
singlet/doubletsinglet
Overlap geneUsp29
Upstream geneLOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, LOC627961
Downstream geneAurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201B07.bB6Ng01-201B07.g
ACCGA021954GA021955
length8321,107
definitionB6Ng01-201B07.b B6Ng01-201B07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctttttactaagtgttgcagtgccctgaataaatgtgttttcc
ttctctggaatctttaatgactcttgaggttttctgttatgctcctgagt
tttagtaggtttgggtttttgtttgtttgcttgcttgcttatttggttat
tttgttttgtttagtagataattatttttgtgtataagtatttggttgca
tatatgtatgtctaccatatacatatgtctatgtatgtataccatatttt
gtttggtgcccacaaagatcagaagaagacaggcttttccggaactagag
gtacagatgattgtgaaccacagtatcagtgcaagggaaacccctgtgct
ctaaaagagtagcacgtgctcttaacctctgagccatctctccagcccca
attttcactatttttgatggggaacggctctatggtgcttctcatgttga
agtgtagcccaaatgttgtatgtgttcacctgtgtgtatttgtgtgtctt
gagtacacatgtggtgcctgaagaagtcattgggacatgacttatctatg
ctgggaatggaacctaggtcctctgcaaggtaacaggcattttgttttgt
tttgttttggttttggtgaaagttatttattcttctttcatatgttacat
caagactgaagtttaccctccccctctctcttctctgttcctttcttcca
ccatttctcttccccagatctactctgtttcccttcagaaaagagccagg
cctcctagagatatcaaccaaatgtggcataacaagttacaataagacta
ggtacaaaccctcatattgaggccggacaagg
gaattcactctgtagactaggctggccttgaactcagagatttgcctgtc
tctacctctcaagtactgggttttaaggccaccactgcagagctattaga
cataaacaatgtcaaccagtactccaaaggtcccaatgacaaaccaagat
aacatatcaccgaagtttattgggcttgcttgcttgcagagcataggtga
gggttgtccatagggacgtggatgcagagacgaaggtcctatgtgttcca
gcccctcccttaggtcacatatactctggagagagtcctgtgatgcttcc
cacccctccaatgagaagaagaaaaactgtcaagggggccccttttgcat
ggtggtggctgctgaactccccatgatggcagtggctcggctcagaggct
agacacacgcactgctctcccgaagtcattcctctgtgtacttctgtctt
ctgatctcttgggtcgccagcatgctggatgtgggcctaatcctaattct
gacaacacaggatttgggcagctgggggagtgcagacagtttgaaggggc
tctggccagtgtggtgagtgcagctctggcaagccttgcccttctcctcc
attccctctgccttgctaaaaccccttagactacattcctaaagctagcc
tccaaggtctagtcccttatttggccacttgctcctccctagtctgacta
ccaaggtccagctatcaaagtattaaagtccagcagtcaaaagccccctt
tggctcacctaataaacatgcccaattaaaattaaacacctcatcctagc
acagggtttcccctttacctttataaactgtcatgctcctcggtgccacg
tctgtttccttcagaggcagtcctttgttccattgtcctttgggacaaat
atccctataacctctcccttcttccccatcctctgcctcctgtgtctctc
ttacttccctgctcctttgtgcttagaactggtctgggggtcccgagatg
atgcttttctttcagtagccatccatctctcaatggtctggttacacagt
gcctcttgggagatgtcttacttgacccccaactcagcctgagacattct
tccccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_6890602_6891710
seq2: B6Ng01-201B07.g_65_1171

seq1  GAATTCACTCTGTAGACTAGGCTGGCCTTGAACTCAGAGATTTGCCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACTAGGCTGGCCTTGAACTCAGAGATTTGCCTGTC  50

seq1  TCTACCTCTCAAGTACTGGGTTTTAAGGCCACCACTGCAGAGCTATTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCTCAAGTACTGGGTTTTAAGGCCACCACTGCAGAGCTATTAGA  100

seq1  CATAAACAATGTCAACCAGTACTCCAAAGGTCCCAATGACAAACCAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACAATGTCAACCAGTACTCCAAAGGTCCCAATGACAAACCAAGAT  150

seq1  AACATATCACCGAAGTTTATTGGGCTTGCTTGCTTGCAGAGCATAGGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATCACCGAAGTTTATTGGGCTTGCTTGCTTGCAGAGCATAGGTGA  200

seq1  GGGTTGTCCATAGGGACGTGGATGCAGAGACGAAGGTCCTATGTGTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGTCCATAGGGACGTGGATGCAGAGACGAAGGTCCTATGTGTTCCA  250

seq1  GCCCCTCCCTTAGGTCACATATACTCTGGAGAGAGTCCTGTGATGCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTCCCTTAGGTCACATATACTCTGGAGAGAGTCCTGTGATGCTTCC  300

seq1  CACCCCTCCAATGAGAAGAAGAAAAACTGTCAAGGGGGCCCCTTTTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTCCAATGAGAAGAAGAAAAACTGTCAAGGGGGCCCCTTTTGCAT  350

seq1  GGTGGTGGCTGCTGAACTCCCCATGATGGCAGTGGCTCGGCTCAGAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGGCTGCTGAACTCCCCATGATGGCAGTGGCTCGGCTCAGAGGCT  400

seq1  AGACACACGCACTGCTCTCCCGAAGTCATTCCTCTGTGTACTTCTGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACGCACTGCTCTCCCGAAGTCATTCCTCTGTGTACTTCTGTCTT  450

seq1  CTGATCTCTTGGGTCGCCAGCATGCTGGATGTGGGCCTAATCCTAATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTCTTGGGTCGCCAGCATGCTGGATGTGGGCCTAATCCTAATTCT  500

seq1  GACAACACAGGATTTGGGCAGCTGGGGGAGTGCAGACAGTTTGAAGGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACACAGGATTTGGGCAGCTGGGGGAGTGCAGACAGTTTGAAGGGGC  550

seq1  TCTGGCCAGTGTGGTGAGTGCAGCTCTGGCAAGCCTTGCCCTTCTCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCAGTGTGGTGAGTGCAGCTCTGGCAAGCCTTGCCCTTCTCCTCC  600

seq1  ATTCCCTCTGCCTTGCTAAAACCCCTTAGACTACATTCCTAAAGCTAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCTGCCTTGCTAAAACCCCTTAGACTACATTCCTAAAGCTAGCC  650

seq1  TCCAAGGTCTAGTCCCTTATTTGGCCACTTGCTCCTCCCTAGTCTGACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGTCTAGTCCCTTATTTGGCCACTTGCTCCTCCCTAGTCTGACTA  700

seq1  CCAAGGTCCAGCTATCAAAGTATTAAAGTCCAGCAGTCAAAAGCCCCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTCCAGCTATCAAAGTATTAAAGTCCAGCAGTCAAAAGCCCCCTT  750

seq1  TGGCTCACCTAATAAACATGCCCAATTAAAATTAAACACCTCATCCTAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCACCTAATAAACATGCCCAATTAAAATTAAACACCTCATCCTAGC  800

seq1  ACAGGGTTTCCCCTTTACCTTTATAAACTGTCATGCTCCTCGGTGCCACG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTTTCCCCTTTACCTTTATAAACTGTCATGCTCCTCGGTGCCACG  850

seq1  TCTGTTTCCTTCAGAGGCAGTCCTTTGTTCCATTGTCCTTTGGGACAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCCTTCAGAGGCAGTCCTTTGTTCCATTGTCCTTTGGGACAAAT  900

seq1  ATCCCTATAACCTCTCCCTTCTTCCCCATCCTCTGCCTCCTGTGTCTCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTATAACCTCTCCCTTCTTCCCCATCCTCTGCCTCCTGTGTCTCTC  950

seq1  TTACTTCCCTGCTCCTTTGTGCTTAGAACTTGGTCTTGGGGGTCCCGAGA  1000
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  TTACTTCCCTGCTCCTTTGTGCTTAGAAC-TGGTC-TGGGGGTCCCGAGA  998

seq1  TGATGCTTTTCCTTTCAGTAGCCATCCATCTCTCAATGGTCTGGTTACAC  1050
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTTTT-CTTTCAGTAGCCATCCATCTCTCAATGGTCTGGTTACAC  1047

seq1  AGTGCCTCTTGGGAGATGTCTTAACCTGACCCCAAACTCAGCCTGAGACA  1100
      |||||||||||||||||||||| || ||||||| ||||||||||||||||
seq2  AGTGCCTCTTGGGAGATGTCTT-ACTTGACCCCCAACTCAGCCTGAGACA  1096

seq1  T--CTCCCCTA  1109
      |   |||||||
seq2  TTCTTCCCCTA  1107