BAC Information

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BAC

Clone NameB6Ng01-201F03
Chromosome7 (Build37)
Map Location 145,556,797 - 145,557,882
singlet/doubletsinglet
Overlap geneTcerg1l
Upstream gene9430038I01Rik, Txnl2, LOC435235
Downstream geneLOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201F03.bB6Ng01-201F03.g
ACCGA022129GA022130
length1,0661,192
definitionB6Ng01-201F03.b B6Ng01-201F03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttcgcttcttacaaaattgcacctcctgccaatgtgttcatg
atatctgtcaagttccagtggtaacagaaagttaacaaacagcatggaca
gctcctggcataacaccataatggagggcaatatcttttgcccacagccc
cagagggtttggtccattcacatcagggagggcgtggtaaagtagtttgc
atcagcactgacaggaggcagaaggaagactgtacagaactaggccatgc
caggcatgggcccctagctcctccaagtagactctgccttccccattcac
tacttaccagtaatgtggtcccacggtgagcccatccagaaattcatcta
tgcatctatctgagcttttacgacctaatcacctgtagaaggcctctcag
acattccccctccccgcaacaggagatcctttattaccacccacaatagt
tttcaatctaagcaagttcacaatcagactccacacacacatactggtgc
tctgtgacagggagatccacagtttacaatgcgtgggagaaaggatgaag
ctgctgttggcttctcctcctatctcatctcccagccctggatcacagca
gagcatctctgggcccgctgcacacagctatgggactgaaagacggtatg
atggatgcaaggcatgaggcatcactggatacaaatagataaatgctgct
gggtgcctgctgcttgagaacaccagccaggaaatgtgtggagccgagag
aacccgggacgccaaccgcacccccatgagatctgcctctcggctgagtt
tggagtataagcaagcaagggctcaattacctgtgtcaactgataaatat
gacaggaacttcccttccccaaggacttagaaaatcccttagtggagtaa
ataatagtaggataagataggtgcagccagaaaaacctgctaagccacga
agagatagccagcaaagccatcccatagggattacctataaagtcatgct
taggcaaaccagtaatactagtgctcctgagcagagcttcatctggtaag
ctcactcagctgctgc
gaattcagcagaagtggggtgtgggcttaatgtgtgtccattaaaagtat
cccaaggatactcttagggattggagcagccattgatgcaaggagtcttg
tgaatgccaccttgagtgctaagatcctgtcaagtgtcccattggcccag
gagccaggtctctgctattcccaggaagcctgtattttattggagtcccc
aagattttagaatggggatacttgccaaggatatctgctaccagcccaag
ggagagaagtgtgttgcagtcaacaaagctgaaaggagttggagatttga
atatttggtcatgagggagtgatgctacttgacagggattaggaagtgtg
gccctgttggagtgggtgtggccttgttggggaaagtatgtcactcaggg
tgggctttggggtttcagaagcccaagccaggcccattgtctttccctct
tcctgctgcctgcctgctgatccagatctagaacattttcccagcagcat
gtctgcttcccatcatgatgctaatggtcttaacctctgaatgctagcaa
acctcaatcaaatgatttcactaataagagctgctgtggtcaaggtgtct
cttcacaacaatagaacactgactaagaaaacgacctatgtctactttgt
catttacacagggaaagtgtccgtggtgttagtattactgtcatcttgat
gggttctagaatcacctggtagacaaattcttgggcatatgtattggttt
gctttctgttgctgtgataagcactgtgaacaaaacctacttgggaagga
aagggtatttatttaactcattggtcacagtccatcatcaaggaaaatta
gggtagggactcaaagcaggaatctggaagcaaggaactgaagcagaggt
catggaggagtacttgcttactaccgggactcccatggcttgctccgttt
gctttcttataaaccctagatcacttcccaaggagtagcacatccatggt
tggctgggtccttcacatcatcattaatcaggaaatgctcctcaccagac
ttgctgagtcatataacagaatcaatttcctcagtgagttccctctctca
agtgactttatttgattcaaccttgacaaactgaccagccaagccatcct
gaagtgctatggtatgttagaacttgtaattgcgtcgtccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_145556797_145557882
seq2: B6Ng01-201F03.b_44_1109

seq1  GAATTCATTTCGCTTCTTACAAAATTGCACCTCCTGCCAATGTGTTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCGCTTCTTACAAAATTGCACCTCCTGCCAATGTGTTCATG  50

seq1  ATATCTGTCAAGTTCCAGTGGTAACAGAAAGTTAACAAACAGCATGGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGTCAAGTTCCAGTGGTAACAGAAAGTTAACAAACAGCATGGACA  100

seq1  GCTCCTGGCATAACACCATAATGGAGGGCAATATCTTTTGCCCACAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGGCATAACACCATAATGGAGGGCAATATCTTTTGCCCACAGCCC  150

seq1  CAGAGGGTTTGGTCCATTCACATCAGGGAGGGCGTGGTAAAGTAGTTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGTTTGGTCCATTCACATCAGGGAGGGCGTGGTAAAGTAGTTTGC  200

seq1  ATCAGCACTGACAGGAGGCAGAAGGAAGACTGTACAGAACTAGGCCATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCACTGACAGGAGGCAGAAGGAAGACTGTACAGAACTAGGCCATGC  250

seq1  CAGGCATGGGCCCCTAGCTCCTCCAAGTAGACTCTGCCTTCCCCATTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGGGCCCCTAGCTCCTCCAAGTAGACTCTGCCTTCCCCATTCAC  300

seq1  TACTTACCAGTAATGTGGTCCCACGGTGAGCCCATCCAGAAATTCATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACCAGTAATGTGGTCCCACGGTGAGCCCATCCAGAAATTCATCTA  350

seq1  TGCATCTATCTGAGCTTTTACGACCTAATCACCTGTAGAAGGCCTCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTATCTGAGCTTTTACGACCTAATCACCTGTAGAAGGCCTCTCAG  400

seq1  ACATTCCCCCTCCCCGCAACAGGAGATCCTTTATTACCACCCACAATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCCCCTCCCCGCAACAGGAGATCCTTTATTACCACCCACAATAGT  450

seq1  TTTCAATCTAAGCAAGTTCACAATCAGACTCCACACACACATACTGGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATCTAAGCAAGTTCACAATCAGACTCCACACACACATACTGGTGC  500

seq1  TCTGTGACAGGGAGATCCACAGTTTACAATGCGTGGGAGAAAGGATGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGACAGGGAGATCCACAGTTTACAATGCGTGGGAGAAAGGATGAAG  550

seq1  CTGCTGTTGGCTTCTCCTCCTATCTCATCTCCCAGCCCTGGATCACAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTTGGCTTCTCCTCCTATCTCATCTCCCAGCCCTGGATCACAGCA  600

seq1  GAGCATCTCTGTGCCAAGCTGCACACAGCTATGGGACTGAAAGACGGTAT  650
      ||||||||||| |||  |||||||||||||||||||||||||||||||||
seq2  GAGCATCTCTGGGCC-CGCTGCACACAGCTATGGGACTGAAAGACGGTAT  649

seq1  GATGGATGCAAGGCATGAGGCATCACTGGATACAAATAGATAAATGCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATGCAAGGCATGAGGCATCACTGGATACAAATAGATAAATGCTGC  699

seq1  TGGGTGCCTGCTGCTTGAGAACACCAGCCAGGAAATGTGTGGAGCCGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCCTGCTGCTTGAGAACACCAGCCAGGAAATGTGTGGAGCCGAGA  749

seq1  GAACCC-GGACGCCAACCGCACCCCCATGAGATCTGCCTCTCGGCTGAGT  799
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCGGGACGCCAACCGCACCCCCATGAGATCTGCCTCTCGGCTGAGT  799

seq1  TTGGAGTATAAGCAAGCAAGGGCTCAATTACCTGTGTCAACTGATAAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGGAGTATAAGCAAGCAAGGGCTCAATTACCTGTGTCAACTGATAAAT-  848

seq1  ATGACAGGAACTTCCTTTCCCCAAAGGACTTTAGAAAATCCCTTAGTGGA  899
      ||||||||||||||| |||||| |||||| ||||||||||||||||||||
seq2  ATGACAGGAACTTCCCTTCCCC-AAGGAC-TTAGAAAATCCCTTAGTGGA  896

seq1  GTAAATAAATAGTAAGATAAGATAGGTGCAGCCAGAAAAACCTGCTAAGC  949
      |||||| ||||||| |||||||||||||||||||||||||||||||||||
seq2  GTAAAT-AATAGTAGGATAAGATAGGTGCAGCCAGAAAAACCTGCTAAGC  945

seq1  CAGCGAAGAGATAAGCCAGCAAAGCCATCCCATAAGGATTACTTATAAAA  999
      || ||||||||| ||||||||||||||||||||| ||||||| ||| |||
seq2  CA-CGAAGAGAT-AGCCAGCAAAGCCATCCCATAGGGATTACCTAT-AAA  992

seq1  GTCAATGTTTTAAGCAAACCAGTAATTAACTAGGTGCTTCCTTGAAAGCA  1049
      ||| |||  ||| |||||||||||||  |||| |||| ||||    ||| 
seq2  GTC-ATG-CTTAGGCAAACCAGTAAT--ACTA-GTGC-TCCT---GAGC-  1032

seq1  AGAGCCTCATCTGTATAGGCTCAACTTCAGCTGCTGC  1086
      ||||| |||||||  || |||||   |||||||||||
seq2  AGAGCTTCATCTG-GTAAGCTCA--CTCAGCTGCTGC  1066