BAC Information

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BAC

Clone NameB6Ng01-202G01
Chromosome7 (Build37)
Map Location 8,770,610 - 8,849,645
singlet/doubletdoublet
Overlap geneLOC100041998, LOC100042009
Upstream geneEG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989
Downstream geneLOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202G01.bB6Ng01-202G01.g
ACCGA022883GA022884
length8581,095
definitionB6Ng01-202G01.b B6Ng01-202G01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,770,610 - 8,771,466)(8,848,567 - 8,849,645)
sequence
gaattctgtcaaatgtaatgttggtacatacccaccaaatattgggttat
agtgcatgtgtctagttttagaatcactctcattgtttgcagtagtgatc
tcaggaagtatcctatctactgaagttatgtaaagtgtccataaaatctt
gcactcattcccttgcttcatttcctctctgagaactaaacactctactt
attacaattttactttttcgttttgtttcattgagattgccctctgggaa
cttccaaaaaatgttgataaggtggttgaatccatcactttatgtagaaa
aaatgacatctaggacaggctgggttacacatagaaaccatctaccaaat
caaataatcagtgagaaacacaaacttaactaaataatcagcaaagatga
aatcagaacatattttctgatttcaagtaagagcacacacataaaaaata
ctgacttttttttcatctgttcttcaagctattggccgatagtctatgaa
ggaaatgttccttttctgctgtcaagtacaaatatattatatccaacaat
ggacatcagccaggggcccctgtggatgaattgggaatagttgcaaaaag
aagaggaggacaacccatagaaacacaagcagtctcatcaaacctggaca
agcaagatctctcagacattgagcctctaaccagagatcatacactagct
gatgtgaagcccccaacaaatatgcagcataagactgcctggtctagcat
cagtgggatagacacacctaaccccagagagacttaagtccccagggatt
gggaagggctgggcgttagggaggtagggatatcatcttggagatggggg
gaggagtt
gaattcactagcttaaactccttgatatagaaacaacactaaattaaaca
gatctgctgtgtgtatgtgtaaatattgatatgtgggtgcacatgccaaa
gtaccacttgcattattgaatttaagtgattcctgtaataagtcatatga
agaagtttgaatatgagagcaaatataatgcttacgtttgaataatagga
aatgttaatgaaataagccttaagaagtttcctcatctggcaataattaa
tcaaaagttctggttattgttcatgagatgcactaattttagcactgaag
gaaaaaattatctctgtagatactttgtgctaaaagatccttcatggtcc
tcttaatagtgtatacttagcattttttcatatatttgcaattttttgtc
ttcaatattaatgttacagagaacataggttttgcacatagcagtctcat
gagataatccagcagattagagattatattcagttcttcatgggctccta
ttgtgactaaaacctaatgtaaatgtagttttacaatagattattctttt
ggaaattcttgggccgaattcttgcaaattgcagttacattttctaaagt
atttctttgtgaaatataatcttccatgaatttgcaataagtcaatatga
gggttaagtcacaggatatgtttgtttttgcaaggttttttttttaagga
tttttatatctacaactagtaaatttgataagtaatatattttatatttg
cagtttccttttagttgacttcatcatcccagtgttttacaatagaaata
cacatttgtagtatatatcagagcagcaaacactcacttgtctcattaga
aattttcattttcagggcaggggctgcaaacagaacagcaggctgccatt
tccctccttccacattcttcttgaatccagaactacatttcttgcactgc
acacagagggatggcattctgagaaaaaaaatttagacattatactgaat
aacgagttttataatatttcttttatgttttttttattagcactttagat
ttcattagctcttttttttgcacactattctgattgaacatttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8770610_8771466
seq2: B6Ng01-202G01.b_43_900

seq1  GAATTCTGTCAAATGTAATGTTGGTACATACCCACCAAATATTGGGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCAAATGTAATGTTGGTACATACCCACCAAATATTGGGTTAT  50

seq1  AGTGCATGTGTCTAGTTTTAGAATCACTCTCATTGTTTGCAGTAGTGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATGTGTCTAGTTTTAGAATCACTCTCATTGTTTGCAGTAGTGATC  100

seq1  TCAGGAAGTATCCTATCTACTGAAGTTATGTAAAGTGTCCATAAAATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGTATCCTATCTACTGAAGTTATGTAAAGTGTCCATAAAATCTT  150

seq1  GCACTCATTCCCTTGCTTCATTTCCTCTCTGAGAACTAAACACTCTACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCATTCCCTTGCTTCATTTCCTCTCTGAGAACTAAACACTCTACTT  200

seq1  ATTACAATTTTACTTTTTCGTTTTGTTTCATTGAGATTGCCCTCTGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATTTTACTTTTTCGTTTTGTTTCATTGAGATTGCCCTCTGGGAA  250

seq1  CTTCCAAAAAATGTTGATAAGGTGGTTGAATCCATCACTTTATGTAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAAAAATGTTGATAAGGTGGTTGAATCCATCACTTTATGTAGAAA  300

seq1  AAATGACATCTAGGACAGGCTGGGTTACACATAGAAACCATCTACCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACATCTAGGACAGGCTGGGTTACACATAGAAACCATCTACCAAAT  350

seq1  CAAATAATCAGTGAGAAACACAAACTTAACTAAATAATCAGCAAAGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATCAGTGAGAAACACAAACTTAACTAAATAATCAGCAAAGATGA  400

seq1  AATCAGAACATATTTTCTGATTTCAAGTAAGAGCACACACATAAAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAACATATTTTCTGATTTCAAGTAAGAGCACACACATAAAAAATA  450

seq1  CTGACTTTTTTTTCATCTGTTCTTCAAGCTATTGGCCGATAGTCTATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTTTTTTTCATCTGTTCTTCAAGCTATTGGCCGATAGTCTATGAA  500

seq1  GGAAATGTTCCTTTTCTGCTGTCAAGTACAAATATATTATATCCAACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGTTCCTTTTCTGCTGTCAAGTACAAATATATTATATCCAACAAT  550

seq1  GGACATCAGCCAGGGGCCCCTGTGGATGAATTGGGAATAGTTGCAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCAGCCAGGGGCCCCTGTGGATGAATTGGGAATAGTTGCAAAAAG  600

seq1  AAGAGGAGGACAACCCATAGAAACACAAGCAGTCTCATCAAACCTGGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAGGACAACCCATAGAAACACAAGCAGTCTCATCAAACCTGGACA  650

seq1  AGCAAGATCTCTCAGACATTGAGCCTCTAACCAGAGATCATACACTAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGATCTCTCAGACATTGAGCCTCTAACCAGAGATCATACACTAGCT  700

seq1  GATGTGAAGCCCCCAACAAATATGCAGCATAAGACTGCCTGGTCTAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAAGCCCCCAACAAATATGCAGCATAAGACTGCCTGGTCTAGCAT  750

seq1  CAGTGGGATAGACACACCTAACCCCAGAGAGACTTAAGTCCCCAGGGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGATAGACACACCTAACCCCAGAGAGACTTAAGTCCCCAGGGATT  800

seq1  GGGAAGGGCTGGGCGTTAGGGAGGTAGGGATATCATCTTGGAGAT-GGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGGAAGGGCTGGGCGTTAGGGAGGTAGGGATATCATCTTGGAGATGGGGG  850

seq1  GAGGAGTT  857
      ||||||||
seq2  GAGGAGTT  858

seq1: chr7_8848567_8849645
seq2: B6Ng01-202G01.g_66_1160 (reverse)

seq1  GGAAATG-TCAATCAG-ATAGTGTGC--AAAAAAGAGCTTATTGAAATCT  46
      ||||||| |||||||| |||||||||  |||||||||| || ||||||| 
seq2  GGAAATGTTCAATCAGAATAGTGTGCAAAAAAAAGAGC-TAATGAAATC-  48

seq1  TAAAGTGCTAAT--AAAAAACATAAAAGAAATA-TATAAAACTCGTTA-T  92
      ||||||||||||  ||||||||||||||||||| |||||||||||||| |
seq2  TAAAGTGCTAATAAAAAAAACATAAAAGAAATATTATAAAACTCGTTATT  98

seq1  CAGTAT-ATGTCTAA--TTTTTTTCTCAG-ATGCCAT-CCTCTGTGTGCA  137
      |||||| ||||||||  |||||||||||| ||||||| ||||||||||||
seq2  CAGTATAATGTCTAAATTTTTTTTCTCAGAATGCCATCCCTCTGTGTGCA  148

seq1  GTGCA--GAATGTAGTTCTGGATTC-AGAAGAATGTGGAAGGAGGG-AAT  183
      |||||   ||||||||||||||||| |||||||||||||||||||| |||
seq2  GTGCAAGAAATGTAGTTCTGGATTCAAGAAGAATGTGGAAGGAGGGAAAT  198

seq1  GGCAGCCTGCTGTTCTGTTTGCAGCCCCTGCCCTGAAAATG-AAATTTCT  232
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGCAGCCTGCTGTTCTGTTTGCAGCCCCTGCCCTGAAAATGAAAATTTCT  248

seq1  AATGAGACAAGTGAGTGTTTGCTGCTCTGATATATACTACAAATGTGTAT  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGACAAGTGAGTGTTTGCTGCTCTGATATATACTACAAATGTGTAT  298

seq1  TTCTATTGTAAAACACTGGGATGATGAAGTCAACTAAAAGGAAACTGCAA  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTGTAAAACACTGGGATGATGAAGTCAACTAAAAGGAAACTGCAA  348

seq1  ATATAAAATATATTACTTATCAAATTTACTAGTTGTAGATATAAAAATCC  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAATATATTACTTATCAAATTTACTAGTTGTAGATATAAAAATCC  398

seq1  TTAAAAAAAAAACCTTGCAAAAACAAACATATCCTGTGACTTAACCCTCA  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAAACCTTGCAAAAACAAACATATCCTGTGACTTAACCCTCA  448

seq1  TATTGACTTATTGCAAATTCATGGAAGATTATATTTCACAAAGAAATACT  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACTTATTGCAAATTCATGGAAGATTATATTTCACAAAGAAATACT  498

seq1  TTAGAAAATGTAACTGCAATTTGCAAGAATTCGGCCCAAGAATTTCCAAA  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAATGTAACTGCAATTTGCAAGAATTCGGCCCAAGAATTTCCAAA  548

seq1  AGAATAATCTATTGTAAAACTACATTTACATTAGGTTTTAGTCACAATAG  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAATCTATTGTAAAACTACATTTACATTAGGTTTTAGTCACAATAG  598

seq1  GAGCCCATGAAGAACTGAATATAATCTCTAATCTGCTGGATTATCTCATG  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCATGAAGAACTGAATATAATCTCTAATCTGCTGGATTATCTCATG  648

seq1  AGACTGCTATGTGCAAAACCTATGTTCTCTGTAACATTAATATTGAAGAC  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCTATGTGCAAAACCTATGTTCTCTGTAACATTAATATTGAAGAC  698

seq1  AAAAAATTGCAAATATATGAAAAAATGCTAAGTATACACTATTAAGAGGA  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTGCAAATATATGAAAAAATGCTAAGTATACACTATTAAGAGGA  748

seq1  CCATGAAGGATCTTTTAGCACAAAGTATCTACAGAGATAATTTTTTCCTT  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAGGATCTTTTAGCACAAAGTATCTACAGAGATAATTTTTTCCTT  798

seq1  CAGTGCTAAAATTAGTGCATCTCATGAACAATAACCAGAACTTTTGATTA  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTAAAATTAGTGCATCTCATGAACAATAACCAGAACTTTTGATTA  848

seq1  ATTATTGCCAGATGAGGAAACTTCTTAAGGCTTATTTCATTAACATTTCC  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGCCAGATGAGGAAACTTCTTAAGGCTTATTTCATTAACATTTCC  898

seq1  TATTATTCAAACGTAAGCATTATATTTGCTCTCATATTCAAACTTCTTCA  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTCAAACGTAAGCATTATATTTGCTCTCATATTCAAACTTCTTCA  948

seq1  TATGACTTATTACAGGAATCACTTAAATTCAATAATGCAAGTGGTACTTT  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTTATTACAGGAATCACTTAAATTCAATAATGCAAGTGGTACTTT  998

seq1  GGCATGTGCACCCACATATCAATATTTACACATACACACAGCAGATCTGT  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTGCACCCACATATCAATATTTACACATACACACAGCAGATCTGT  1048

seq1  TTAATTTAGTGTTGTTTCTATATCAAGGAGTTTAAGCTAGTGAATTC  1079
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTAGTGTTGTTTCTATATCAAGGAGTTTAAGCTAGTGAATTC  1095