BAC Information

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BAC

Clone NameB6Ng01-203B09
Chromosome7 (Build37)
Map Location 119,201,801 - 119,352,860
singlet/doubletdoublet
Overlap geneUsp47, Dkk3
Upstream geneEif4g2, LOC100043221, LOC100042658, LOC384658, Galntl4, LOC668399, LOC100042678
Downstream geneMical2, Micalcl, Parva, LOC627808, Tead1, 4632411J06Rik, LOC434227, Arntl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203B09.bB6Ng01-203B09.g
ACCGA023401GA023402
length1,1471,120
definitionB6Ng01-203B09.b B6Ng01-203B09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,201,801 - 119,202,962)(119,351,707 - 119,352,860)
sequence
gaattcattgaaattaagataatggtttttagaagtgttgttatttttgt
gcaaataaaacatgccatttgttacattataaaattaaaaggcattgaca
gtactccatgtagtaaccacttttagttattttgcttatttttatcttac
ctcatgaaataatgcttttaagaaaatggataatgcttacaaatattcat
aagcatggggatctgagttggctccctgtgttagtgctgcagatcaaata
aatttgattcacagggttggtgacggggtcggggagaggcaattaggcag
ttgggctagttggatcttcctgtgttatatatgatgtttaaagtgaaaat
gcttatatatttccatcttaattattggtgtttagacttagagaataaga
ttatttacactaatataacctagtgtagtacatttgttattcttaatatc
ttgttaaatatcatataatacctatttgtatcttggtaacaaagtatcct
gacttttgttgagaaagtttacctaatacatactgcagaagagagctttc
ttaagtggcattgaaaaaaaaaaaaacagaaataatttccaactaatcag
tcttgtcctctgttatgtattttttgtttttgtagtgttttagcccaagt
gctaatctgtctatatttgtattttctctttaaaggttatgtgggattag
taaaccaggcgatgacgtgctatttgaatagccttttgcaaacacttttt
atgactcctgaatttaggaatgcattatataagtgagtatttgaaaaatg
ttctataagtgaaagtaagaataaaagtacagtttttaaatcctaaatta
aatttaccttcatagatttacttgtaatatttgggatatttcttacttta
taagctgacttcctgtatattatatatgaacaagagtctaccgaaagact
gacataaaagcaatggggaggagaatcataaatgatctgatagaaaaggg
tcaaatatgatgttcccattcataatttactgctttgtccatcataattt
actgcttgtagggagagtgtctgattttgagagagttcaagaacatatgc
atgattttctccctctctaattaagatttccagggtggattttgaac
gaattctttgaggcctgataggtacctgggagaatcccgagaccaatgac
cttggaggtctctaagctttgtggtgggaacagaaaacacagcaatcctg
tgacctcctgtcagcttggcagagggcctgggttcaagaccagaggaaaa
actagagctaaagggtgggggttggtaaacatacataaatccacactctg
tcccaggattcctgcaggtaggcagcacttggggtgatttattctgctta
agcattctcttgcgtgcctgtgccagggtgcacacaatacccttcacctt
gacgaatttgcagcctcgttcaaaggtcgtgtttgctcagtggatggatg
agacagggaggggagcctgtgcccagggtagacctgggtgtggggaggcc
cctgcagggagggactgtcattcctgagcttggagggtcaggtaagctgc
ttgctacagaacatatggaggtgtttacctcagccaggaaggaagcctct
ggctctatgacttcacttcccgccctcctgcctcagctcctagacgcctt
cctcttctgatagctgccggtggtgttccaagaagccagctctcccccaa
gctctgtgatataccagcacaattaaaattcactcatttgcccctccata
ggaagcagggcagacaggatgttggtgccaacgcaagccaaaaaccaagt
cagtatgggtggtatctgacagtttcccattagcagtctccagccgaagg
ccagccaggacaggagtatgaagctccaggctctcagaggggtagctccc
tgccttcaggacctggtaggtttcttggattcttggaagtagctctgaca
ggaagtagctctgacatttgccaagcagacttgcccccaggtgggcaggg
gcatctcgcttctgggagaccttcctgtttgagcagagtgttttgggatt
cagaaccagttctggcctgattaggcaaagataaaggaagacagtacagc
tttgggtcttcagcaaatgagatcagggactcaatctgcagtttgacaca
acacaaaaacgtgtgttgtagcttagtagatggctctcaggctcatattg
aatcttagtcatcttgacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_119201801_119202962
seq2: B6Ng01-203B09.b_46_1192

seq1  GAATTCATTGAAATTAAGATAATGGTTTTTAGAAGTGTTGTTATTTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAAATTAAGATAATGGTTTTTAGAAGTGTTGTTATTTTTGT  50

seq1  GCAAATAAAACATGCCATTTGTTACATTATAAAATTAAAAGGCATTGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATAAAACATGCCATTTGTTACATTATAAAATTAAAAGGCATTGACA  100

seq1  GTACTCCATGTAGTAACCACTTTTAGTTATTTTGCTTATTTTTATCTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCCATGTAGTAACCACTTTTAGTTATTTTGCTTATTTTTATCTTAC  150

seq1  CTCATGAAATAATGCTTTTAAGAAAATGGATAATGCTTACAAATATTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAAATAATGCTTTTAAGAAAATGGATAATGCTTACAAATATTCAT  200

seq1  AAGCATGGGGATCTGAGTTGGCTCCCTGTGTTAGTGCTGCAGATCAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGGGGATCTGAGTTGGCTCCCTGTGTTAGTGCTGCAGATCAAATA  250

seq1  AATTTGATTCACAGGGTTGGTGACGGGGTCGGGGAGAGGCAATTAGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGATTCACAGGGTTGGTGACGGGGTCGGGGAGAGGCAATTAGGCAG  300

seq1  TTGGGCTAGTTGGATCTTCCTGTGTTATATATGATGTTTAAAGTGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTAGTTGGATCTTCCTGTGTTATATATGATGTTTAAAGTGAAAAT  350

seq1  GCTTATATATTTCCATCTTAATTATTGGTGTTTAGACTTAGAGAATAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATATATTTCCATCTTAATTATTGGTGTTTAGACTTAGAGAATAAGA  400

seq1  TTATTTACACTAATATAACCTAGTGTAGTACATTTGTTATTCTTAATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACACTAATATAACCTAGTGTAGTACATTTGTTATTCTTAATATC  450

seq1  TTGTTAAATATCATATAATACCTATTTGTATCTTGGTAACAAAGTATCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAATATCATATAATACCTATTTGTATCTTGGTAACAAAGTATCCT  500

seq1  GACTTTTGTTGAGAAAGTTTACCTAATACATACTGCAGAAGAGAGCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTGTTGAGAAAGTTTACCTAATACATACTGCAGAAGAGAGCTTTC  550

seq1  TTAAGTGGCATTGAAAAAAAAAAAAACAGAAATAATTTCCAACTAATCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGGCATTGAAAAAAAAAAAAACAGAAATAATTTCCAACTAATCAG  600

seq1  TCTTGTCCTCTGTTATGTATTTTTTGTTTTTGTAGTGTTTTAGCCCAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCCTCTGTTATGTATTTTTTGTTTTTGTAGTGTTTTAGCCCAAGT  650

seq1  GCTAATCTGTCTATATTTGTATTTTCTCTTTAAAGGTTATGTGGGATTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATCTGTCTATATTTGTATTTTCTCTTTAAAGGTTATGTGGGATTAG  700

seq1  TAAACCAGGCGATGACGTGCTATTTGAATAGCCTTTTGCAAACACTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAGGCGATGACGTGCTATTTGAATAGCCTTTTGCAAACACTTTTT  750

seq1  ATGACTCCTGAATTTAGGAATGCATTATATAAGTGAGTATTTGAAAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCCTGAATTTAGGAATGCATTATATAAGTGAGTATTTGAAAAATG  800

seq1  TTCTATAAGTGAAAGTAAGAATAAAAGTACAGTTTTTAAATCCTAAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAAGTGAAAGTAAGAATAAAAGTACAGTTTTTAAATCCTAAATTA  850

seq1  AATTTACCTTCATAGATTTACTTGTAATATTTGGGATATTTCTTACTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACCTTCATAGATTTACTTGTAATATTTGGGATATTTCTTACTTTA  900

seq1  TAAGCTGACTTCCTGTATATTATATATGAACAAGAGTCTACCGAAAGACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGACTTCCTGTATATTATATATGAACAAGAGTCTACCGAAAGACT  950

seq1  GACATAAAAGCAATGGGGAGGAAGAATCATAAATGATCTGATAGAAAAGG  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GACATAAAAGCAATGGGGAGG-AGAATCATAAATGATCTGATAGAAAAGG  999

seq1  GTCAAATTATTGAATGTCCCCATTCATAATTTTACTGCTTTTGTCCATTC  1050
      |||||| |||   |||| ||||||||||| |||||||| |||||||| ||
seq2  GTCAAA-TAT--GATGTTCCCATTCATAA-TTTACTGC-TTTGTCCA-TC  1043

seq1  ATAATTTTACTGCTTTTGTAGGGAAGGAGTGTCTGATTTTGAGAGAG-TC  1099
      |||| ||||||||  |||||||||  ||||||||||||||||||||| ||
seq2  ATAA-TTTACTGC--TTGTAGGGA--GAGTGTCTGATTTTGAGAGAGTTC  1088

seq1  CAGAACATATGCATTGATTTTCTTCCCTCTCTAAATTTAAGATTT-CAGT  1148
       |||||||||||| |||||||| |||||||||||  ||||||||| ||| 
seq2  AAGAACATATGCA-TGATTTTC-TCCCTCTCTAA--TTAAGATTTCCAGG  1134

seq1  GTTGATTTTTGAAC  1162
      || || ||||||||
seq2  GTGGA-TTTTGAAC  1147

seq1: chr7_119351707_119352860
seq2: B6Ng01-203B09.g_64_1183 (reverse)

seq1  ACGTCAAAGAGTGACTAAGAATTCAAATATATGAGCCTGTGGGGGCCATT  50
      ||||| |||| |||||||| |||||   |||||||||  || | ||||| 
seq2  ACGTC-AAGA-TGACTAAG-ATTCA---ATATGAGCC--TGAGAGCCAT-  41

seq1  CTTACTTAAGCTACCACACACGTTTTTTTTGTTTGTTTGTTTGTTTTTTT  100
        ||| |||||||| |||||||||           ||||| |  | |   
seq2  -CTAC-TAAGCTACAACACACGTT-----------TTTGTGTTGTGTCAA  78

seq1  CCTGCAAGGATGGAGTCCCCTGGATCTCATTTGGCTGAGACCCCAAAGCT  150
       |||||  ||| |||||||   |||||||||| |||||   |||||||||
seq2  ACTGCA--GATTGAGTCCC--TGATCTCATTT-GCTGAAGACCCAAAGCT  123

seq1  GTACTGTCTTCCTTTATCTTTTGCCCTTATTCAGGCCAGACCTGGTTCTG  200
      |||||||||||||||||| ||||||  || |||||||||| |||||||||
seq2  GTACTGTCTTCCTTTATC-TTTGCC--TAATCAGGCCAGAACTGGTTCTG  170

seq1  AATCCAAAACCACTTCCTGCTTCAAACAGGAAGTTCTCCCAGAAGCGAGA  250
      ||||| ||| ||||  |||| |||||||||||| ||||||||||||||||
seq2  AATCCCAAAACACT--CTGC-TCAAACAGGAAGGTCTCCCAGAAGCGAGA  217

seq1  TGCCCCTGCCCACCTGGGGGCAAGTCTGCTTGGCAAATGTCAGAGCTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTGCCCACCTGGGGGCAAGTCTGCTTGGCAAATGTCAGAGCTACT  267

seq1  TCCTGTCAGAGCTACTTCCAAGAATCCAAGAAACCTACCAGGTCCTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCAGAGCTACTTCCAAGAATCCAAGAAACCTACCAGGTCCTGAAG  317

seq1  GCAGGGAGCTACCCCTCCTGAGAGCCTGGAGCTTCATACTCCTGTCCTGG  400
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GCAGGGAGCTACCCCT-CTGAGAGCCTGGAGCTTCATACTCCTGTCCTGG  366

seq1  CTGGCCTTCGGCTGGAGACTGCTAATGGGAAACTGTCAGATACCACCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTCGGCTGGAGACTGCTAATGGGAAACTGTCAGATACCACCCAT  416

seq1  ACTGACTTGGTTTTTGGCTTGCGTTGGCACCAACATCCTGTCTGCCCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTTGGTTTTTGGCTTGCGTTGGCACCAACATCCTGTCTGCCCTGC  466

seq1  TTCCTATGGAGGGGCAAATGAGTGAATTTTAATTGTGCTGGTATATCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGGAGGGGCAAATGAGTGAATTTTAATTGTGCTGGTATATCACA  516

seq1  GAGCTTGGGGGAGAGCTGGCTTCTTGGAACACCACCGGCAGCTATCAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGGGGGAGAGCTGGCTTCTTGGAACACCACCGGCAGCTATCAGAA  566

seq1  GAGGAAGGCGTCTAGGAGCTGAGGCAGGAGGGCGGGAAGTGAAGTCATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGCGTCTAGGAGCTGAGGCAGGAGGGCGGGAAGTGAAGTCATAG  616

seq1  AGCCAGAGGCTTCCTTCCTGGCTGAGGTAAACACCTCCATATGTTCTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGGCTTCCTTCCTGGCTGAGGTAAACACCTCCATATGTTCTGTA  666

seq1  GCAAGCAGCTTACCTGACCCTCCAAGCTCAGGAATGACAGTCCCTCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAGCTTACCTGACCCTCCAAGCTCAGGAATGACAGTCCCTCCCTG  716

seq1  CAGGGGCCTCCCCACACCCAGGTCTACCCTGGGCACAGGCTCCCCTCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCCTCCCCACACCCAGGTCTACCCTGGGCACAGGCTCCCCTCCCT  766

seq1  GTCTCATCCATCCACTGAGCAAACACGACCTTTGAACGAGGCTGCAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATCCATCCACTGAGCAAACACGACCTTTGAACGAGGCTGCAAATT  816

seq1  CGTCAAGGTGAAGGGTATTGTGTGCACCCTGGCACAGGCACGCAAGAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAAGGTGAAGGGTATTGTGTGCACCCTGGCACAGGCACGCAAGAGAA  866

seq1  TGCTTAAGCAGAATAAATCACCCCAAGTGCTGCCTACCTGCAGGAATCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAGCAGAATAAATCACCCCAAGTGCTGCCTACCTGCAGGAATCCT  916

seq1  GGGACAGAGTGTGGATTTATGTATGTTTACCAACCCCCACCCTTTAGCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGAGTGTGGATTTATGTATGTTTACCAACCCCCACCCTTTAGCTC  966

seq1  TAGTTTTTCCTCTGGTCTTGAACCCAGGCCCTCTGCCAAGCTGACAGGAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTTCCTCTGGTCTTGAACCCAGGCCCTCTGCCAAGCTGACAGGAG  1016

seq1  GTCACAGGATTGCTGTGTTTTCTGTTCCCACCACAAAGCTTAGAGACCTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGGATTGCTGTGTTTTCTGTTCCCACCACAAAGCTTAGAGACCTC  1066

seq1  CAAGGTCATTGGTCTCGGGATTCTCCCAGGTACCTATCAGGCCTCAAAGA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCATTGGTCTCGGGATTCTCCCAGGTACCTATCAGGCCTCAAAGA  1116

seq1  ATTC  1154
      ||||
seq2  ATTC  1120