BAC Information

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BAC

Clone NameB6Ng01-205B01
Chromosome7 (Build37)
Map Location 140,054,988 - 140,282,892
singlet/doubletdoublet
Overlap geneC430003P19Rik, Zranb1, Ctbp2
Upstream geneGpr26, Cpxm2, 4631426J05Rik, LOC100043682, LOC100043683, Oat, Nkx1-2, 2310007H09Rik, A930008G19Rik, 2010208K18Rik
Downstream geneLOC668747, 4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695, Fank1, Adam12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205B01.bB6Ng01-205B01.g
ACCGA024844GA024845
length8491,128
definitionB6Ng01-205B01.b B6Ng01-205B01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(140,282,048 - 140,282,892)(140,054,988 - 140,056,097)
sequence
gaattctaaagagaacaggtccttggactctctcgctggatttcttcaag
cctcagtgactggaatcggctatcgctgtagtaagaattttggtggtagt
tgctcctgctctttcctgcctccttgccctccctcctgctttgaccttca
ttcacaactttttgtagttttaggtgagtcttattatgtagtccatacca
atcctcttgtcttgcctcagtctcccccctgagccactacttactgacag
ccagatcctgtggtgatggcttggagcttgtaagtgcttagttcccattc
aggattgatgagtgacattctcccttggctgtacctgagcaccacagaga
agtgtgctccgcccccttcacactcctctacatgattggctgtcttgaag
tttcccagtcctactggctccaccttagtgctgcagctatctgcctcttg
gtgggggaatgggtggattccttgtgttatttcagatactctgccccaat
agttcacgtcatcttggacattcggttgctcaattcacgctcttccttaa
agcttggatgaaacactaagggatgggagtggctgaactgcgtggttccc
accagtctttcattttatcgccaaactcttatctttcccttttcctctct
tgtggcccaagctaattaggatgttggtccttgctgtgatatatgctgca
cgcttttgttatgtgacatgcttgtcacctgtgtttaaactaacttgaag
tcatctgatctgttttaccctctgagcacttactgtgagctaggtgctat
gctagagttgcagcgggactgtttgctgtttatggaaatgtctcttcct
gaattcccaacatcacacagttgcagaaactatctgcagctggcaaaacc
atgcctctgcgagagcatgaggcaaatcagagttatctgctaccgacagt
ccgaagcagccccaatccccacacctggggttaaaacgaaaacacattct
tataatatttctgtgttttttaaagaaaccaagattccagaattctcaaa
aatgtcactacactaccgtcctggaccaccagaaacacttagtcggtatt
tctagtagtcagtcatctgtgttgagtctgagggaattcttgtctttttt
ccctgcagtgctgggaattcaaccactgacccacatggatccccagccca
agatttgtttttgcaaaggaaatctgtatattagtcagatttaaagactg
ctgagttgggtaattgggaagtttggaatacttcatctcttgtggagatg
ctggcagtgctgtgggtggaacccagggcagcccatctcccagcaaattc
tctgcacagcaaacattccctcaaagtcaaatacagaaattgaggccaca
aagtatctttcttgccctctccactcacagatgtagactagcaactggaa
atgtttttaaactgggagtgtgtgtggctggttcgatgaatgagcagaga
atggagggttttgtagagcagggccttgtcgcagcagaatttatgcagtt
agtatctgatgtacagtaagtgttgggtgtgccataagtgccgcagtcct
agcagtaaacaagcacaggtgcctgccccgagctttattttagccagagt
aggcactgatgatcctgtaagtctgtgacatggcagatgattgagaagac
aaatgggaggcgagatataggggacgaagtgcctagcagatgttatttcc
tatatgttggttgggcaaagccttctcagtttaagtaccgtttgagcaaa
gggtatggagtaagtctttgggtcatttcaggagagagatttattgagaa
cagtggggttagtttgtcctctctgcagtagggttattttggtcttatag
ggatttattccttcacagctatgctttgtacttgagcatggctagcaagg
atcctcacttggtaatttgcaaagaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_140282048_140282892
seq2: B6Ng01-205B01.b_44_892 (reverse)

seq1  AGGAAGAGACATTTCCATAAACAGC-AACAGTCCCGCTGCAACTCTAGCA  49
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGGAAGAGACATTTCCATAAACAGCAAACAGTCCCGCTGCAACTCTAGCA  50

seq1  TAGCACCTGGCTCACAGTAAGTGCTCAGGGGGTAAAAACAGATCAGATGA  99
      |||||||| ||||||||||||||||||| |||| ||||||||||||||||
seq2  TAGCACCTAGCTCACAGTAAGTGCTCAGAGGGT-AAAACAGATCAGATGA  99

seq1  CTTCAAGTTAG-TTAAACACAGGTGACAAGCATGTCACATA--CAAAGCG  146
      ||||||||||| |||||||||||||||||||||||||||||   ||||||
seq2  CTTCAAGTTAGTTTAAACACAGGTGACAAGCATGTCACATAACAAAAGCG  149

seq1  TGCAGCATATATCACAGCAAGGACCAACATCCTAATTAGCTTGGGCCACA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCATATATCACAGCAAGGACCAACATCCTAATTAGCTTGGGCCACA  199

seq1  AGAGAGG-AAAGGGAAAGATAAGAGTTTGGCGATAAAATGAAAGACTGGT  245
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGAAAAGGGAAAGATAAGAGTTTGGCGATAAAATGAAAGACTGGT  249

seq1  GGGAACCACGCAGTTCAGCCACTCCCATCCCTTAGTGTTTCATCCAAGCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACCACGCAGTTCAGCCACTCCCATCCCTTAGTGTTTCATCCAAGCT  299

seq1  TTAAGGAAGAGCGTGAATTGAGCAACCGAATGTCCAAGATGACGTGAACT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGAAGAGCGTGAATTGAGCAACCGAATGTCCAAGATGACGTGAACT  349

seq1  ATTGGGGCAGAGTATCTGAAATAACACAAGGAATCCACCCATTCCCCCAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGCAGAGTATCTGAAATAACACAAGGAATCCACCCATTCCCCCAC  399

seq1  CAAGAGGCAGATAGCTGCAGCACTAAGGTGGAGCCAGTAGGACTGGGAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGCAGATAGCTGCAGCACTAAGGTGGAGCCAGTAGGACTGGGAAA  449

seq1  CTTCAAGACAGCCAATCATGTAGAGGAGTGTGAAGGGGGCGGAGCACACT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGACAGCCAATCATGTAGAGGAGTGTGAAGGGGGCGGAGCACACT  499

seq1  TCTCTGTGGTGCTCAGGTACAGCCAAGGGAGAATGTCACTCATCAATCCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGGTGCTCAGGTACAGCCAAGGGAGAATGTCACTCATCAATCCT  549

seq1  GAATGGGAACTAAGCACTTACAAGCTCCAAGCCATCACCACAGGATCTGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGAACTAAGCACTTACAAGCTCCAAGCCATCACCACAGGATCTGG  599

seq1  CTGTCAGTAAGTAGTGGCTCAGGGGGGAGACTGAGGCAAGACAAGAGGAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGTAAGTAGTGGCTCAGGGGGGAGACTGAGGCAAGACAAGAGGAT  649

seq1  TGGTATGGACTACATAATAAGACTCACCTAAAACTACAAAAAGTTGTGAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGGACTACATAATAAGACTCACCTAAAACTACAAAAAGTTGTGAA  699

seq1  TGAAGGTCAAAGCAGGAGGGAGGGCAAGGAGGCAGGAAAGAGCAGGAGCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTCAAAGCAGGAGGGAGGGCAAGGAGGCAGGAAAGAGCAGGAGCA  749

seq1  ACTACCACCAAAATTCTTACTACAGCGATAGCCGATTCCAGTCACTGAGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCACCAAAATTCTTACTACAGCGATAGCCGATTCCAGTCACTGAGG  799

seq1  CTTGAAGAAATCCAGCGAGAGAGTCCAAGGACCTGTTCTCTTTAGAATTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGAAATCCAGCGAGAGAGTCCAAGGACCTGTTCTCTTTAGAATTC  849

seq1: chr7_140054988_140056097
seq2: B6Ng01-205B01.g_67_1194

seq1  GAATTCCCAACATCACACAGTTGCAGAAACTATCTGCAGCTGGCAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAACATCACACAGTTGCAGAAACTATCTGCAGCTGGCAAAACC  50

seq1  ATGCCTCTGCGAGAGCATGAGGCAAATCAGAGTTATCTGCTACCGACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCTGCGAGAGCATGAGGCAAATCAGAGTTATCTGCTACCGACAGT  100

seq1  CCGAAGCAGCCCCAATCCCCACACCTGGGGTTAAAACGAAAACACATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAGCAGCCCCAATCCCCACACCTGGGGTTAAAACGAAAACACATTCT  150

seq1  TATAATATTTCTGTGTTTTTTAAAGAAACCAAGATTCCAGAATTCTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATTTCTGTGTTTTTTAAAGAAACCAAGATTCCAGAATTCTCAAA  200

seq1  AATGTCACTACACTACCGTCCTGGACCACCAGAAACACTTAGTCGGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCACTACACTACCGTCCTGGACCACCAGAAACACTTAGTCGGTATT  250

seq1  TCTAGTAGTCAGTCATCTGTGTTGAGTCTGAGGGAATTCTTGTCTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTAGTCAGTCATCTGTGTTGAGTCTGAGGGAATTCTTGTCTTTTTT  300

seq1  CCCTGCAGTGCTGGGAATTCAACCACTGACCCACATGGATCCCCAGCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGTGCTGGGAATTCAACCACTGACCCACATGGATCCCCAGCCCA  350

seq1  AGATTTGTTTTTGCAAAGGAAATCTGTATATTAGTCAGATTTAAAGACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGTTTTTGCAAAGGAAATCTGTATATTAGTCAGATTTAAAGACTG  400

seq1  CTGAGTTGGGTAATTGGGAAGTTTGGAATACTTCATCTCTTGTGGAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTGGGTAATTGGGAAGTTTGGAATACTTCATCTCTTGTGGAGATG  450

seq1  CTGGCAGTGCTGTGGGTGGAACCCAGGGCAGCCCATCTCCCAGCAAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGTGCTGTGGGTGGAACCCAGGGCAGCCCATCTCCCAGCAAATTC  500

seq1  TCTGCACAGCAAACATTCCCTCAAAGTCAAATACAGAAATTGAGGCCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACAGCAAACATTCCCTCAAAGTCAAATACAGAAATTGAGGCCACA  550

seq1  AAGTATCTTTCTTGCCCTCTCCACTCACAGATGTAGACTAGCAACTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCTTTCTTGCCCTCTCCACTCACAGATGTAGACTAGCAACTGGAA  600

seq1  ATGTTTTTAAACTGGGAGTGTGTGTGGCTGGTTCGATGAATGAGCAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTAAACTGGGAGTGTGTGTGGCTGGTTCGATGAATGAGCAGAGA  650

seq1  ATGGAGGGTTTTGTAGAGCAGGGCCTTGTCGCAGCAGAATTTATGCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGGTTTTGTAGAGCAGGGCCTTGTCGCAGCAGAATTTATGCAGTT  700

seq1  AGTATCTGATGTACAGTAAGTGTTGGGTGTGCCATAAGTGCCGCAGTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTGATGTACAGTAAGTGTTGGGTGTGCCATAAGTGCCGCAGTCCT  750

seq1  AGCAGTAAACAAGCACAGGTGCCTGCCCCGAGC-TTATTTTAGCCAGAGT  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGCAGTAAACAAGCACAGGTGCCTGCCCCGAGCTTTATTTTAGCCAGAGT  800

seq1  AGGCACTGATGATCCTGTAAGTCTGTGACATGGCAGATGA-TGAGAAGAC  848
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGGCACTGATGATCCTGTAAGTCTGTGACATGGCAGATGATTGAGAAGAC  850

seq1  AAAT-GGAGGCGAGATATAGGGGACGAAGTGCCTAGCAGATGTTATTTCC  897
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGAGGCGAGATATAGGGGACGAAGTGCCTAGCAGATGTTATTTCC  900

seq1  TATATGTTGGTTGGGCAAAGCC-TCTCAGTTAAGGTACCGTTTGAGCAAA  946
      |||||||||||||||||||||| |||||||| | ||||||||||||||||
seq2  TATATGTTGGTTGGGCAAAGCCTTCTCAGTTTAAGTACCGTTTGAGCAAA  950

seq1  GGG-AAGGAGTAAGTC-TTGGGTCA-TTCAGGAGAGAGATT--ATGAG-A  990
      ||| | |||||||||| |||||||| |||||||||||||||   |||| |
seq2  GGGTATGGAGTAAGTCTTTGGGTCATTTCAGGAGAGAGATTTATTGAGAA  1000

seq1  CAGT-GGGTTAGTTTGTCCTCTCTGCAGGAGGGTTATTTTGG-CTTATA-  1037
      |||| ||||||||||||||||||||||| ||||||||||||| |||||| 
seq2  CAGTGGGGTTAGTTTGTCCTCTCTGCAGTAGGGTTATTTTGGTCTTATAG  1050

seq1  GGATATA-TCCTCACCAGCCATGC-TTGTAC-TGAGCATGGCT-GCAA-G  1082
      |||| || ||||   |||| |||| |||||| ||||||||||| |||| |
seq2  GGATTTATTCCTTCACAGCTATGCTTTGTACTTGAGCATGGCTAGCAAGG  1100

seq1  AGCTCCAACTGGTAATTTGCAAAGAATT  1110
      | |  ||  |||||||||||||||||||
seq2  ATCCTCACTTGGTAATTTGCAAAGAATT  1128