BAC Information

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BAC

Clone NameB6Ng01-205H13
Chromosome7 (Build37)
Map Location 126,419,274 - 126,571,208
singlet/doubletdoublet
Overlap geneLOC100042871
Upstream geneSyt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139
Downstream geneGp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205H13.bB6Ng01-205H13.g
ACCGA025142GA025143
length1,178941
definitionB6Ng01-205H13.b B6Ng01-205H13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,419,274 - 126,420,443)(126,570,281 - 126,571,208)
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctattggtggcctt
tttgtctttttgagagtgtttttttgccttacagaagctttgcaatttta
tgaggtcccatttgtcgattctcgttcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcatcgaggcttttccccca
ctttctcctctataagtttcggtgtctctggtttcatgtcaagttccttg
attcagtggtattttcttgtgctttattgtagaagttttatttttatagc
tttaagtgtagatctgtgatctggaattaatgatgttgttgattagaagt
gaagtttgagcgagtgagtaacttcttgtctaaaactcagtaatctaacc
atgttccgtagcataataataatattaataataaagagaaaataacagaa
taaagcttatgcactgtagacacaaatggcaaattccattgagtccttta
ataattaaagataatgtgttgttagcttaactagttcacagatgattctt
aaattattaggatataacagcattggatggccatctgttagcaatttcag
aggagaggtgaacctgtaggtgtgactagacccggggatctgaggatatg
gccaacactaggcctccctcttccatttcagatctttcttctctgcactt
cacagagggaagacagtgaatctttcaggattgcaatctcatccttcacc
gtgacctcaattcctccatattttgatggactacattggtttaagaaaaa
actttggtggacactgctggctttggctcacagccaatgctgtagccatc
cttggggaacctcggactttgagtccttcaggtggtgggtctcttttgtc
ttcctagctcttccctcttccttccacttaaagggcctttggctacttaa
tagaattgctgggcccttgccagtcagaccctgctacttttgcttcaaaa
tttgagtaaggtgatccacttgagaaagaaatttttggagctcttgggga
agtagttccttaacgggaaaggaaaaat
gaattcttaatccctaagcaagtgttgacttacactactctgatgcaatg
gtcataagtctcccttcctaaacttctgtgattcagggaggtcatttttt
ttttccaatgcttatctggggtctccccacaggagggaggcagctgataa
gctgatttccctaggcctggcgccagagaattgagattggtgttgtccct
gctctctgatgaatgatcaatagagggcgctgtgagaacacatctacaaa
gaggaggaccgtcttggtaccagttccacaaccgctattgccagaaggga
tttgcaaaatctatctacttccaaacattcattttacagatgagcaatca
gatacccagacaggagacatgacttgcccaaggtcatatagctagtgtgt
ggggagtggcgatgactcttagccccttggcattctccactctgaggagg
cgttgccaggcacccagtgagacagctgccctggagctgcagccttgagc
ctgccacagcctattttcaagctcccagtgccaagtggtcacctttctcc
tactccagcagggaaaggtgctagatggtggaggcagggcagaacgtgta
cggcctttttgattccataatggttgggaaagtattatattttttggttt
ctttgggaacattctaggtcagcattctgtgctgtgtagaaatgggtttt
agacctgattacttctgagaaatcttctggcctcccaaattcacagaccc
attttttacattcccatagccgaaacagctttggggattgtcatttcctg
tccaccacatcaccttgatttacagttccccactgctctgaacttatttt
tatactccactattatttgttcatctacttattaagtgacctgtttcaat
gtccggctttcaggtcacttccaaattccattgaaataagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126419274_126420443
seq2: B6Ng01-205H13.b_41_1218

seq1  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50

seq1  TCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCC  100

seq1  TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTATTGGTGGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTATTGGTGGCCTT  150

seq1  TTTGTCTTTTTGAGAGTGTTTTTTTGCCTTACAGAAGCTTTGCAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTTTTGAGAGTGTTTTTTTGCCTTACAGAAGCTTTGCAATTTTA  200

seq1  TGAGGTCCCATTTGTCGATTCTCGTTCTTACAGCACAAGCCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCATTTGTCGATTCTCGTTCTTACAGCACAAGCCATTGCTGTT  250

seq1  CTATTCAGGAATTTTTCCCCTGTGCCCATATCATCGAGGCTTTTCCCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAGGAATTTTTCCCCTGTGCCCATATCATCGAGGCTTTTCCCCCA  300

seq1  CTTTCTCCTCTATAAGTTTCGGTGTCTCTGGTTTCATGTCAAGTTCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCTCTATAAGTTTCGGTGTCTCTGGTTTCATGTCAAGTTCCTTG  350

seq1  ATTCAGTGGTATTTTCTTGTGCTTTATTGTAGAAGTTTTATTTTTATAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTGGTATTTTCTTGTGCTTTATTGTAGAAGTTTTATTTTTATAGC  400

seq1  TTTAAGTGTAGATCTGTGATCTGGAATTAATGATGTTGTTGATTAGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTGTAGATCTGTGATCTGGAATTAATGATGTTGTTGATTAGAAGT  450

seq1  GAAGTTTGAGCGAGTGAGTAACTTCTTGTCTAAAACTCAGTAATCTAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTGAGCGAGTGAGTAACTTCTTGTCTAAAACTCAGTAATCTAACC  500

seq1  ATGTTCCGTAGCATAATAATAATATTAATAATAAAGAGAAAATAACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCGTAGCATAATAATAATATTAATAATAAAGAGAAAATAACAGAA  550

seq1  TAAAGCTTATGCACTGTAGACACAAATGGCAAATTCCATTGAGTCCTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTATGCACTGTAGACACAAATGGCAAATTCCATTGAGTCCTTTA  600

seq1  ATAATTAAAGATAATGTGTTGTTAGCTTAACTAGTTCACAGATGATTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAAAGATAATGTGTTGTTAGCTTAACTAGTTCACAGATGATTCTT  650

seq1  AAATTATTAGGATATAACAGCATTGGATGGCCATCTGTTAGCAATTTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTAGGATATAACAGCATTGGATGGCCATCTGTTAGCAATTTCAG  700

seq1  AGGAGAGGTGAACCTGTAGGTGTGACTAGACCCGGGGATCTGAGGATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGTGAACCTGTAGGTGTGACTAGACCCGGGGATCTGAGGATATG  750

seq1  GCCAACACTAGGCCTCCCTCTTCCATTTCAGATCTTTCTTCTCTGCACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACACTAGGCCTCCCTCTTCCATTTCAGATCTTTCTTCTCTGCACTT  800

seq1  CACAGAGGGAAGACAGTGAATCTTTCAGGATTGCAATCTCATCC-TCACC  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CACAGAGGGAAGACAGTGAATCTTTCAGGATTGCAATCTCATCCTTCACC  850

seq1  GTGACCTCAATTCCTCCATATTTTGATGGACTACATTGGTTTAAGAAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTCAATTCCTCCATATTTTGATGGACTACATTGGTTTAAGAAAAA  900

seq1  ACTTTGGTGGACACTGCTGGCTTTTGGCTCACAGCCAATGCTGTAGCCAT  949
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTTTGGTGGACACTGCTGGC-TTTGGCTCACAGCCAATGCTGTAGCCAT  949

seq1  -CTTGGGGAACCTCGGACTTTGAGTCCTTCAGGTTGT-GGTCTCTTTTGT  997
       ||||||||||||||||||||||||||||||||| || ||||||||||||
seq2  CCTTGGGGAACCTCGGACTTTGAGTCCTTCAGGTGGTGGGTCTCTTTTGT  999

seq1  CTTCCTAGCTCTTCCCTCTTCCTTCCACTTAAAGGCCC--TGGCTAC-TC  1044
      ||||||||||||||||||||||||||||||||||| ||  ||||||| | 
seq2  CTTCCTAGCTCTTCCCTCTTCCTTCCACTTAAAGGGCCTTTGGCTACTTA  1049

seq1  ATAG-ATTGCTGGCCCCT--GCAGTCAGACCCTGCCTACTTTTGC-TCCA  1090
      |||| |||||||| ||||   ||||||||||||| |||||||||| || |
seq2  ATAGAATTGCTGGGCCCTTGCCAGTCAGACCCTG-CTACTTTTGCTTCAA  1098

seq1  AATTTGAGTA--GTGATCCAACTTTGAGAGAGATGTTT-GAGCTCTTGGG  1137
      ||||||||||  ||||||||  |  || ||| || ||| |||||||||||
seq2  AATTTGAGTAAGGTGATCCACTTGAGAAAGAAATTTTTGGAGCTCTTGGG  1148

seq1  GAGTTAGTTTCCTTAACGGGAAAAGGGAAAAAT  1170
      ||  ||| |||||||||||||||  ||||||||
seq2  GAAGTAG-TTCCTTAACGGGAAA--GGAAAAAT  1178

seq1: chr7_126570281_126571208
seq2: B6Ng01-205H13.g_70_1010 (reverse)

seq1  CCTTATTTC-ATAGAATTTGGAGTTGACTTGAAAGGCAGACATTGAAACA  49
      ||||||||| || |||||||||  |||| |||||| | ||||||||||||
seq2  CCTTATTTCAATGGAATTTGGAAGTGACCTGAAAGCCGGACATTGAAACA  50

seq1  GGTCACTT-ATAAGTAGATGAGCAAATAATAGT-GAGTATAAAAATAAGT  97
      |||||||| |||||||||||| ||||||||||| ||||||||||||||||
seq2  GGTCACTTAATAAGTAGATGAACAAATAATAGTGGAGTATAAAAATAAGT  100

seq1  TCAGAGCAGTGGGG-ACTGTAGATC-AGGTGATGTGGTGGACAGGAAATG  145
      |||||||||||||| |||||| ||| ||||||||||||||||||||||||
seq2  TCAGAGCAGTGGGGAACTGTAAATCAAGGTGATGTGGTGGACAGGAAATG  150

seq1  ACAAATCCC-AAGCTG-TTCGGCTATGGGATTGT-AAAAATGGGTCTGTG  192
      ||||  ||| |||||| ||||||||||||| ||| |||||||||||||||
seq2  ACAATCCCCAAAGCTGTTTCGGCTATGGGAATGTAAAAAATGGGTCTGTG  200

seq1  AATTT-GGAGGCCAGAAGA-TTCTCAGAAGTAATCAGGTCTAAAACCCA-  239
      ||||| ||||||||||||| ||||||||||||||||||||||||||||| 
seq2  AATTTGGGAGGCCAGAAGATTTCTCAGAAGTAATCAGGTCTAAAACCCAT  250

seq1  TTCTACACAGCACAGAATGCTGACCTAGAATGTTCCCAA--GAACCAAAA  287
      |||||||||||||||||||||||||||||||||||||||   ||||||||
seq2  TTCTACACAGCACAGAATGCTGACCTAGAATGTTCCCAAAGAAACCAAAA  300

seq1  AATATAATACTTTCCCAACCATTATGGAATCAAAAAGGCCGTACACGTTC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATACTTTCCCAACCATTATGGAATCAAAAAGGCCGTACACGTTC  350

seq1  TGCCCTGCCTCCACCATCTAGCACCTTTCCCTGCTGGAGTAGGAGAAAGG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGCCTCCACCATCTAGCACCTTTCCCTGCTGGAGTAGGAGAAAGG  400

seq1  TGACCACTTGGCACTGGGAGCTTGAAAATAGGCTGTGGCAGGCTCAAGGC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACTTGGCACTGGGAGCTTGAAAATAGGCTGTGGCAGGCTCAAGGC  450

seq1  TGCAGCTCCAGGGCAGCTGTCTCACTGGGTGCCTGGCAACGCCTCCTCAG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTCCAGGGCAGCTGTCTCACTGGGTGCCTGGCAACGCCTCCTCAG  500

seq1  AGTGGAGAATGCCAAGGGGCTAAGAGTCATCGCCACTCCCCACACACTAG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGAATGCCAAGGGGCTAAGAGTCATCGCCACTCCCCACACACTAG  550

seq1  CTATATGACCTTGGGCAAGTCATGTCTCCTGTCTGGGTATCTGATTGCTC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGACCTTGGGCAAGTCATGTCTCCTGTCTGGGTATCTGATTGCTC  600

seq1  ATCTGTAAAATGAATGTTTGGAAGTAGATAGATTTTGCAAATCCCTTCTG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAAAATGAATGTTTGGAAGTAGATAGATTTTGCAAATCCCTTCTG  650

seq1  GCAATAGCGGTTGTGGAACTGGTACCAAGACGGTCCTCCTCTTTGTAGAT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAGCGGTTGTGGAACTGGTACCAAGACGGTCCTCCTCTTTGTAGAT  700

seq1  GTGTTCTCACAGCGCCCTCTATTGATCATTCATCAGAGAGCAGGGACAAC  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTCACAGCGCCCTCTATTGATCATTCATCAGAGAGCAGGGACAAC  750

seq1  ACCAATCTCAATTCTCTGGCGCCAGGCCTAGGGAAATCAGCTTATCAGCT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCTCAATTCTCTGGCGCCAGGCCTAGGGAAATCAGCTTATCAGCT  800

seq1  GCCTCCCTCCTGTGGGGAGACCCCAGATAAGCATTGGAAAAAAAAAATGA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCTCCTGTGGGGAGACCCCAGATAAGCATTGGAAAAAAAAAATGA  850

seq1  CCTCCCTGAATCACAGAAGTTTAGGAAGGGAGACTTATGACCATTGCATC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTGAATCACAGAAGTTTAGGAAGGGAGACTTATGACCATTGCATC  900

seq1  AGAGTAGTGTAAGTCAACACTTGCTTAGGGATTAAGAATTC  928
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGTGTAAGTCAACACTTGCTTAGGGATTAAGAATTC  941