BAC Information

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BAC

Clone NameB6Ng01-206H18
Chromosome7 (Build37)
Map Location 79,244,424 - 79,245,603
singlet/doubletsinglet
Overlap geneMctp2
Upstream geneLOC665535
Downstream geneLOC100042873, LOC100042880, LOC233391, LOC665570, LOC100042029, EG384643, LOC625243
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206H18.bB6Ng01-206H18.g
ACCGA025887GA025888
length1,1901,225
definitionB6Ng01-206H18.b B6Ng01-206H18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattgtaactccgtacttacaaatcaggaaaacttctagccatc
ttttggcaacatgggacatttacatgaaactcttctagcaattgtcacca
ctgctgtgtatagagaagaagcggtattttatcttccctgcttatcctct
ctgatcacttgttataacatatgcacatttcaaatatgtgcacatattgc
attgagaattttagtcagcgctgcactctcctggagagcaggtcaaagac
tcctgaggagctgagtgtactgaaagtcattttatggaagggtgactcca
accctatggctttgagtatctaggcaaagcttcaaggaggagttggtaag
attagaggtcctaggaaggtggagattcacttgtttggatggtctagagt
gtacgaagcccgtctgtataacgcaggaagtggtgttaggaatgcaagcg
tagtgcagttagaatcacagggaattccttgcaatgacagcagcacactt
tgtgtttaccctgagaggagtatgtgaaatggaacagatcaaagaataaa
tgcccagaagagtattagcaagctagcaggagaacagcatgcgtactaaa
tgaggccatcttgttggatatgccatagagaagaatctacaggaacgggt
ggccagtagcttttgtttctaagagagcgggcatctgagggcttcatttg
tcccagcctgagcaaaacagtaactattgaatttttatgaaataatccca
agacagtgcggggatacactcatgtctttgggtgctgccctaatcatttt
tgctaactgccttaaaatttccaaaataatttcctcacatggtgggtagg
ctcatgttaagaaatttaactcctcccaccccctgattagaatttggcga
gctcccaactcaggaaaactgctcaagtctatacaagcatctccttaatt
atttggtttcaagatggaaatctgagcttgacctaggttcttcaaccgtg
gatggtgctatagcggactcccattagaatttccaggcttggggcaacac
atacacattcatactctggactggcaacacacacaaatgttaggtcacat
gaatggatgtctcccttcaatctttcgacacttagttggccaataataga
atctttgaacacctcaagtgtgtgggagaatggagtctca

gaattctcacctgagaaataccaaatgactgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgtggtgg
gattgcaagcttgtacaaccactctggaagtcagtctggaggttcctcag
aaaattggacataatattactggaatatccagcaatacctctcctgggct
tatacccagaggaagttccaactggtaataagaacacatgcttcactatg
tccatagcagccttatttataatagccagaagctggaaagaacccagatg
tccctcaacagaagaatggatacagaaaatgtggtacatttacacaatgg
agtacaactcagctattaaaaacaatgaattaatgaaattcttgggcaaa
tggatgtatctggaggatatcatcctaagtgaggtaacccaatcacaaaa
gaagtcattagatatgcactcactggtaagtggatattagcccagaagca
tagaacacccaagatacaattggcaaaacacaagacaatcaagaagatgg
aagaccaatgggtggatactttgttcctccttagaacagggaacaaaata
cccatgaaaggagttacagagacaaagtttgaagctaagactaaaggata
gactatccagagactaccccacctggggatccatcccataatcagccacc
aaactcagacactattgcatatgccagcaagatttttgatgaagaaaccc
tagtatagctgtctcgtatgaaggctatgccagtgcctgggcaaatacag
aagttggatgctcacagtcatctataagatggaacacagggctcagctag
gagaaagtacccaagggagctgaaggtgtctgcacacttataaggtggat
aacatttggacctaacagtaccaccaggagcttcatgttttcttagcttg
catatttagcagaaaaatggccttagtttggccattccactggggaagga
gaggccccttgggtattggcaacctttatattggcccagttacaggaatg
cccaggtcagacggaactgggtagggtaggggaccatgggtcagggtgga
tggctatatggcgcaaacttcttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_79244424_79245603
seq2: B6Ng01-206H18.b_45_1234 (reverse)

seq1  TGAGACTCAATT-TCTCACACACTTGA-GTG-TCAAAGA-TCTAATAT--  44
      |||||||| ||| || ||||||||||| ||| ||||||| |||| |||  
seq2  TGAGACTCCATTCTCCCACACACTTGAGGTGTTCAAAGATTCTATTATTG  50

seq1  GGCAACTAAGGTGGTTGGAAAGA-TGGAGGGAGACATCAATTCATGTGAC  93
      | ||||||| |||  | |||||| || ||||||||||| |||||||||| 
seq2  GCCAACTAA-GTG--TCGAAAGATTGAAGGGAGACATCCATTCATGTGA-  96

seq1  CCTAACATTTGTGTG---TGCCAGTTCAGAGTATGAATTGTGTATGTGT-  139
      |||||||||||||||   ||||||| ||||||||||| ||||||||||| 
seq2  CCTAACATTTGTGTGTGTTGCCAGTCCAGAGTATGAA-TGTGTATGTGTT  145

seq1  -GCCCAAGGCTGG-AATTCTAATGGGAGTCCGCTATAGCA-CATCCACGG  186
        |||||| |||| |||||||||||||||||||||||||| |||||||||
seq2  GCCCCAAGCCTGGAAATTCTAATGGGAGTCCGCTATAGCACCATCCACGG  195

seq1  TTGAAGAACCTAGGTCAAGCTCAGATTTCCATCTTGAAACCAAATAATTA  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAACCTAGGTCAAGCTCAGATTTCCATCTTGAAACCAAATAATTA  245

seq1  AGGAGATGCTTGTATAGACTTGAGCAGTTTTCCTGAGTTGGGAGCTCGCC  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATGCTTGTATAGACTTGAGCAGTTTTCCTGAGTTGGGAGCTCGCC  295

seq1  AAATTCTAATCAGGGGGTGGGAGGAGTTAAATTTCTTAACATGAGCCTA-  335
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAATTCTAATCAGGGGGTGGGAGGAGTTAAATTTCTTAACATGAGCCTAC  345

seq1  CCACCATGTGAGGAAATTATTTTGGAAATTTTAAGGCAGTTAGCAAAAAT  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATGTGAGGAAATTATTTTGGAAATTTTAAGGCAGTTAGCAAAAAT  395

seq1  GATTAGGGCAGCACCCAAAGACATGAGTGTATCCCCGCACTGTCTTGGGA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGGGCAGCACCCAAAGACATGAGTGTATCCCCGCACTGTCTTGGGA  445

seq1  TTATTTCATAAAAATTCAATAGTTACTGTTTTGCTCAGGCTGGGACAAAT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCATAAAAATTCAATAGTTACTGTTTTGCTCAGGCTGGGACAAAT  495

seq1  GAAGCCCTCAGATGCCCGCTCTCTTAGAAACAAAAGCTACTGGCCACCCG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCTCAGATGCCCGCTCTCTTAGAAACAAAAGCTACTGGCCACCCG  545

seq1  TTCCTGTAGATTCTTCTCTATGGCATATCCAACAAGATGGCCTCATTTAG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTAGATTCTTCTCTATGGCATATCCAACAAGATGGCCTCATTTAG  595

seq1  TACGCATGCTGTTCTCCTGCTAGCTTGCTAATACTCTTCTGGGCATTTAT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCATGCTGTTCTCCTGCTAGCTTGCTAATACTCTTCTGGGCATTTAT  645

seq1  TCTTTGATCTGTTCCATTTCACATACTCCTCTCAGGGTAAACACAAAGTG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATCTGTTCCATTTCACATACTCCTCTCAGGGTAAACACAAAGTG  695

seq1  TGCTGCTGTCATTGCAAGGAATTCCCTGTGATTCTAACTGCACTACGCTT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGTCATTGCAAGGAATTCCCTGTGATTCTAACTGCACTACGCTT  745

seq1  GCATTCCTAACACCACTTCCTGCGTTATACAGACGGGCTTCGTACACTCT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCTAACACCACTTCCTGCGTTATACAGACGGGCTTCGTACACTCT  795

seq1  AGACCATCCAAACAAGTGAATCTCCACCTTCCTAGGACCTCTAATCTTAC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATCCAAACAAGTGAATCTCCACCTTCCTAGGACCTCTAATCTTAC  845

seq1  CAACTCCTCCTTGAAGCTTTGCCTAGATACTCAAAGCCATAGGGTTGGAG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCTCCTTGAAGCTTTGCCTAGATACTCAAAGCCATAGGGTTGGAG  895

seq1  TCACCCTTCCATAAAATGACTTTCAGTACACTCAGCTCCTCAGGAGTCTT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTTCCATAAAATGACTTTCAGTACACTCAGCTCCTCAGGAGTCTT  945

seq1  TGACCTGCTCTCCAGGAGAGTGCAGCGCTGACTAAAATTCTCAATGCAAT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGCTCTCCAGGAGAGTGCAGCGCTGACTAAAATTCTCAATGCAAT  995

seq1  ATGTGCACATATTTGAAATGTGCATATGTTATAACAAGTGATCAGAGAGG  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACATATTTGAAATGTGCATATGTTATAACAAGTGATCAGAGAGG  1045

seq1  ATAAGCAGGGAAGATAAAATACCGCTTCTTCTCTATACACAGCAGTGGTG  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAGGGAAGATAAAATACCGCTTCTTCTCTATACACAGCAGTGGTG  1095

seq1  ACAATTGCTAGAAGAGTTTCATGTAAATGTCCCATGTTGCCAAAAGATGG  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGCTAGAAGAGTTTCATGTAAATGTCCCATGTTGCCAAAAGATGG  1145

seq1  CTAGAAGTTTTCCTGATTTGTAAGTACGGAGTTACAATAGAATTC  1180
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGTTTTCCTGATTTGTAAGTACGGAGTTACAATAGAATTC  1190


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