BAC Information

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BAC

Clone NameB6Ng01-207A02
Chromosome7 (Build37)
Map Location 77,792,655 - 77,888,278
singlet/doubletdoublet
Overlap genenone
Upstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
Downstream geneLOC665535
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207A02.bB6Ng01-207A02.g
ACCGA026271GA026272
length1,1991,033
definitionB6Ng01-207A02.b B6Ng01-207A02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,887,074 - 77,888,278)(77,792,655 - 77,793,655)
sequence
gaattccagttgtgtggcagcctggcacatacagcgctgaagaagggact
ccatctcaaataacatggaaggcaagcactgacataaggatggccctctg
atttgcactggcaaacacatacacacatacaaacacacagaaagctatac
attttgactagaaaacaaacctgactgatttgaagtcagaggagctattg
taacaactaagagaggtactttatgtaagaacatctgaccaggcactcac
atgagcaagtgcccccccccccactcattcccactgtaccatgggagaca
tccctgtcttctagttcatctctatttagccccttcttgttatttccaaa
atcgcattatcctttgcagttgtatctgcctttcaacatttctgtttcta
aaactacaattaatgcataaagaaaggaaacctcaggttaaaaatgtttg
tctaaaacttcagtgtgttttacaaacctgtagaatgttcgagaaggaag
cagacttgtgtctactttgattttatgccatctgtgattattatggatga
aagaaaggcggaggaaactggttccaggtaggaaatccagtgtccaaatc
tatggcagtcatttgggaaggtctggttacatcttccacctgtgccaggg
gttagatttgattctcacaggacgttgtatctgaggactttctggatgga
ccttcctcattcaaaactccttccatcagtgtgtagagccccacctgtcc
agcttcctcatgtctcctttcaaattaatctgaggggtcagttaaatgca
aaaaaaaaaatacccttgaagctgatattcccattgtaacaactgagatg
aactgaatgttggagtttagttgaagtatggaagaattagtctccagcct
aaagtcagcaacagtgttctttcatcaacctttgatctgtgcagaaatta
ctctggaagaacgaaaggatagaagcaatgtcagagaaagatttcaccca
aaagttcaaacattttcagtttagacttatgttacgtgagaacgtgggca
ttattttgcaagggtgtctttgcagaacataaccgcattgctaggaccag
tgaaattgcaagaaagcatatactgaacatggaaccagataccttactgc
tcctagcactcactagtaaaggctaaataatggatctcgggtgaccttt

gaattcttgaccttcctgtttttatgagttgttagttacctttaagttgt
gctagctacagagattaacttgacttgcttgatggtgaattcggcccttt
atatgactccatccactgtgtactgtgtaatgggaatatgttagcatctg
tgctaactttccataaacctgagcattcaaaccaatgaacttctcctgca
tcaggatgttaaccctctcatcattttccatgcctacaatcaagccaggc
cacaacttgttctgcacccatagattcaaccaaccacccactgaaaacaa
tcaaaaggagcagtgattgtactaaatataaacacaagcacacacacaca
cacgtgtatgtacatacacacacatacacacatgggtgtgcacacatata
cacacacatatacacacttgcatacacatgcgcacatgtgggcacacaca
tatacactcatatacacacacatgcacacacacacacacatatatataca
tacacatacacacatacaaacacatatatgtgcacacatatacacactcg
cacacatatatacactcgcacacatacacatgtaatttgtgtttatggta
ctgtataattatttggatatttctcataataaatgtaaatgatatgtgaa
tataaaatatgtgaacataaaatatactagaaatgcattatgggtcacac
ccaaaggacatgatattttagaaagtacttgagcatctgtggagttttgc
taaccaagatgggtacattagatcttttttgtttgtttgtttttctgaga
cagttattttttttcctattgtctcttctggatgtcttgcaactttgcca
tgtagaatcaaagcaaatcttttcaacctcatagagtttctgcctgccct
ttatctcttgaagtggagtgctgggggttaagacatgtgccacctattgc
ttgggctaaagggggaaggaggtctttttggtaatttccagatgatggac
catcatctcaccaaggagtatgaaatttcacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77887074_77888278
seq2: B6Ng01-207A02.b_45_1243 (reverse)

seq1  AAAGGTCACAGGA-TTCCATTATTTTACCCTTTACTAGGTGAGTTTGCTA  49
      |||||||||  ||  ||||||| |||| ||||||||| |||||  |||||
seq2  AAAGGTCACCCGAGATCCATTA-TTTAGCCTTTACTA-GTGAG--TGCTA  46

seq1  GAAAGCAGTAAGTTATCCTGGGTCCCCTGTTTCAGTATATTGCTTTTCTG  99
      |  ||||||||| ||||   ||| || || ||||||||| ||||||  ||
seq2  G-GAGCAGTAAGGTATC--TGGTTCCATG-TTCAGTATA-TGCTTTCTTG  91

seq1  CAATATCCCCTGGTTTCTAGCATTGCCGTTATGTCTTGCAAAGACACCCT  149
      |||| | | |||| | |||||| ||| |||||||  ||||||||||||||
seq2  CAAT-TTCACTGG-TCCTAGCAATGCGGTTATGTTCTGCAAAGACACCCT  139

seq1  TGGCAAAT-ATGCCCACG-TCTCACGT-ACATAAGTCTAAACTG-AAATG  195
      ||  |||| ||||||||| |||||||| |||||||||||||||| |||||
seq2  TGCAAAATAATGCCCACGTTCTCACGTAACATAAGTCTAAACTGAAAATG  189

seq1  TTTGAACTTTTTGGGTTGAAATCTTTTCTCTGACATTGCTTCTAT-CTTT  244
      |||||||||||  || ||||||| ||||||||||||||||||||| ||||
seq2  TTTGAACTTTT--GGGTGAAATC-TTTCTCTGACATTGCTTCTATCCTTT  236

seq1  CGTTCTTCCAGAGTAATTTCTGCACAGATCAAAGGTTGATGAA--GACAC  292
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  CGTTCTTCCAGAGTAATTTCTGCACAGATCAAAGGTTGATGAAAGAACAC  286

seq1  TGTTGCTGACTTTAGGCTGGAGACTAATTCTTCCATACTTCAACTAAACT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGACTTTAGGCTGGAGACTAATTCTTCCATACTTCAACTAAACT  336

seq1  CCAACATTCAGTTCATCTCAGTTGTTACAATGGGAATATCAGCTTCAAGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATTCAGTTCATCTCAGTTGTTACAATGGGAATATCAGCTTCAAGG  386

seq1  GTATTTTTTTTTTTGCATTTAACTGACCCCTCAGATTAATTTGAAAGGAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTTTTTTTGCATTTAACTGACCCCTCAGATTAATTTGAAAGGAG  436

seq1  ACATGAGGAAGCTGGACAGGTGGGGCTCTACACACTGATGGAAGGAGTTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGGAAGCTGGACAGGTGGGGCTCTACACACTGATGGAAGGAGTTT  486

seq1  TGAATGAGGAAGGTCCATCCAGAAAGTCCTCAGATACAACGTCCTGTGAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAGGAAGGTCCATCCAGAAAGTCCTCAGATACAACGTCCTGTGAG  536

seq1  AATCAAATCTAACCCCTGGCACAGGTGGAAGATGTAACCAGACCTTCCCA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATCTAACCCCTGGCACAGGTGGAAGATGTAACCAGACCTTCCCA  586

seq1  AATGACTGCCATAGATTTGGACACTGGATTTCCTACCTGGAACCAGTTTC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTGCCATAGATTTGGACACTGGATTTCCTACCTGGAACCAGTTTC  636

seq1  CTCCGCCTTTCTTTCATCCATAATAATCACAGATGGCATAAAATCAAAGT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGCCTTTCTTTCATCCATAATAATCACAGATGGCATAAAATCAAAGT  686

seq1  AGACACAAGTCTGCTTCCTTCTCGAACATTCTACAGGTTTGTAAAACACA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAAGTCTGCTTCCTTCTCGAACATTCTACAGGTTTGTAAAACACA  736

seq1  CTGAAGTTTTAGACAAACATTTTTAACCTGAGGTTTCCTTTCTTTATGCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTTTAGACAAACATTTTTAACCTGAGGTTTCCTTTCTTTATGCA  786

seq1  TTAATTGTAGTTTTAGAAACAGAAATGTTGAAAGGCAGATACAACTGCAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGTAGTTTTAGAAACAGAAATGTTGAAAGGCAGATACAACTGCAA  836

seq1  AGGATAATGCGATTTTGGAAATAACAAGAAGGGGCTAAATAGAGATGAAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAATGCGATTTTGGAAATAACAAGAAGGGGCTAAATAGAGATGAAC  886

seq1  TAGAAGACAGGGATGTCTCCCATGGTACAGTGGGAATGAGTGGGGGGGGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGACAGGGATGTCTCCCATGGTACAGTGGGAATGAGTGGGGGGGGG  936

seq1  GGCACTTGCTCATGTGAGTGCCTGGTCAGATGTTCTTACATAAAGTACCT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTGCTCATGTGAGTGCCTGGTCAGATGTTCTTACATAAAGTACCT  986

seq1  CTCTTAGTTGTTACAATAGCTCCTCTGACTTCAAATCAGTCAGGTTTGTT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGTTGTTACAATAGCTCCTCTGACTTCAAATCAGTCAGGTTTGTT  1036

seq1  TTCTAGTCAAAATGTATAGCTTTCTGTGTGTTTGTATGTGTGTATGTGTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTCAAAATGTATAGCTTTCTGTGTGTTTGTATGTGTGTATGTGTT  1086

seq1  TGCCAGTGCAAATCAGAGGGCCATCCTTATGTCAGTGCTTGCCTTCCATG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTGCAAATCAGAGGGCCATCCTTATGTCAGTGCTTGCCTTCCATG  1136

seq1  TTATTTGAGATGGAGTCCCTTCTTCAGCGCTGTATGTGCCAGGCTGCCAC  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGAGATGGAGTCCCTTCTTCAGCGCTGTATGTGCCAGGCTGCCAC  1186

seq1  ACAACTGGAATTC  1205
      |||||||||||||
seq2  ACAACTGGAATTC  1199


seq1: chr7_77792655_77793655
seq2: B6Ng01-207A02.g_66_1098

seq1  GAATTCTTGACCTTCCTGTTTTTATGAGTTGTTAGTTACCTTTAAGTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACCTTCCTGTTTTTATGAGTTGTTAGTTACCTTTAAGTTGT  50

seq1  GCTAGCTACAGAGATTAACTTGACTTGCTTGATGGTGAATTCGGCCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTACAGAGATTAACTTGACTTGCTTGATGGTGAATTCGGCCCTTT  100

seq1  ATATGACTCCATCCACTGTGTACTGTGTAATGGGAATATGTTAGCATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACTCCATCCACTGTGTACTGTGTAATGGGAATATGTTAGCATCTG  150

seq1  TGCTAACTTTCCATAAACCTGAGCATTCAAACCAATGAACTTCTCCTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAACTTTCCATAAACCTGAGCATTCAAACCAATGAACTTCTCCTGCA  200

seq1  TCAGGATGTTAACCCTCTCATCATTTTCCATGCCTACAATCAAGCCAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGTTAACCCTCTCATCATTTTCCATGCCTACAATCAAGCCAGGC  250

seq1  CACAACTTGTTCTGCACCCATAGATTCAACCAACCACCCACTGAAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTTGTTCTGCACCCATAGATTCAACCAACCACCCACTGAAAACAA  300

seq1  TCAAAAGGAGCAGTGATTGTACTAAATATAAACACAAGCACACACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGGAGCAGTGATTGTACTAAATATAAACACAAGCACACACACACA  350

seq1  CACGTGTATGTACATACACACACATACACACATGGGTGTGCACACATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGTATGTACATACACACACATACACACATGGGTGTGCACACATATA  400

seq1  CACACACATATACACACTTGCATACACATGCGCACATGTGGGCACACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACATATACACACTTGCATACACATGCGCACATGTGGGCACACACA  450

seq1  TATACACTCATATACACACACATGCACACACACACACACATATATATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACTCATATACACACACATGCACACACACACACACATATATATACA  500

seq1  TACACATACACACATACAAACACATATATGTGCACACATATACACACTCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATACACACATACAAACACATATATGTGCACACATATACACACTCG  550

seq1  CACACATATATACACTCGCACACATACACATGTAATTTGTGTTTATGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATATATACACTCGCACACATACACATGTAATTTGTGTTTATGGTA  600

seq1  CTGTATAATTATTTGGATATTTCTCATAATAAATGTAAATGATATGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATAATTATTTGGATATTTCTCATAATAAATGTAAATGATATGTGAA  650

seq1  TATAAAATATGTGAACATAAAATATACTAGAAATGCATTATGGGTCACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATATGTGAACATAAAATATACTAGAAATGCATTATGGGTCACAC  700

seq1  CCAAAGGACATGATATTTTAGAAAGTACTTGAGCATCTGTGGAG-TTTGC  749
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCAAAGGACATGATATTTTAGAAAGTACTTGAGCATCTGTGGAGTTTTGC  750

seq1  TAACCAAGATGGGTACA-TAGATC-TTTTTGTTTGTTTGTTTTTCTGAGA  797
      ||||||||||||||||| |||||| |||||||||||||||||||||||||
seq2  TAACCAAGATGGGTACATTAGATCTTTTTTGTTTGTTTGTTTTTCTGAGA  800

seq1  CAGTTA--TTTTTTCCTA-TGTCTC-TCTGGATGTCTTGCAAC-TTGCCA  842
      ||||||  |||||||||| |||||| ||||||||||||||||| ||||||
seq2  CAGTTATTTTTTTTCCTATTGTCTCTTCTGGATGTCTTGCAACTTTGCCA  850

seq1  TGTAG-ATC-AAGC-AATC-TTTCAA-CTCATAGAG-TTCTGCCTG-CCT  885
      ||||| ||| |||| |||| |||||| ||||||||| ||||||||| |||
seq2  TGTAGAATCAAAGCAAATCTTTTCAACCTCATAGAGTTTCTGCCTGCCCT  900

seq1  TTATCTCTTG-AGTGGAGTGCTGGGGTTAAAGACATGTGCCA-CTA-TGC  932
      |||||||||| ||||||||||||||| | ||||||||||||| ||| |||
seq2  TTATCTCTTGAAGTGGAGTGCTGGGGGTTAAGACATGTGCCACCTATTGC  950

seq1  -TGGGC-AAAGGGGG-AGGAGGTCTTTT--GTAAATTTCAGA-GATG--A  974
       ||||| |||||||| ||||||||||||  |||| || |||| ||||   
seq2  TTGGGCTAAAGGGGGAAGGAGGTCTTTTTGGTAATTTCCAGATGATGGAC  1000

seq1  CATAA--TCACCAA-GAGTA-GAA--TTCACCA  1001
      ||| |  ||||||| ||||| |||  |||||||
seq2  CATCATCTCACCAAGGAGTATGAAATTTCACCA  1033


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